co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G04200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006182: cGMP biosynthetic process	0.00E+00
2	GO:0071327: cellular response to trehalose stimulus	0.00E+00
3	GO:0043201: response to leucine	0.00E+00
4	GO:1900367: positive regulation of defense response to insect	0.00E+00
5	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
6	GO:0080052: response to histidine	0.00E+00
7	GO:0046109: uridine biosynthetic process	0.00E+00
8	GO:0080053: response to phenylalanine	0.00E+00
9	GO:2000541: positive regulation of protein geranylgeranylation	0.00E+00
10	GO:0009617: response to bacterium	1.95E-07
11	GO:0006468: protein phosphorylation	5.48E-07
12	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.45E-06
13	GO:0006952: defense response	3.17E-06
14	GO:0042742: defense response to bacterium	3.47E-06
15	GO:1900426: positive regulation of defense response to bacterium	4.13E-06
16	GO:0080142: regulation of salicylic acid biosynthetic process	1.84E-05
17	GO:0006099: tricarboxylic acid cycle	2.59E-05
18	GO:0051707: response to other organism	3.91E-05
19	GO:0009751: response to salicylic acid	4.02E-05
20	GO:0006102: isocitrate metabolic process	1.08E-04
21	GO:0006083: acetate metabolic process	1.52E-04
22	GO:0019276: UDP-N-acetylgalactosamine metabolic process	1.52E-04
23	GO:0034975: protein folding in endoplasmic reticulum	1.52E-04
24	GO:0006047: UDP-N-acetylglucosamine metabolic process	1.52E-04
25	GO:0042350: GDP-L-fucose biosynthetic process	1.52E-04
26	GO:0051245: negative regulation of cellular defense response	1.52E-04
27	GO:0010230: alternative respiration	1.52E-04
28	GO:0046244: salicylic acid catabolic process	1.52E-04
29	GO:1901183: positive regulation of camalexin biosynthetic process	1.52E-04
30	GO:0043069: negative regulation of programmed cell death	2.36E-04
31	GO:0009737: response to abscisic acid	2.64E-04
32	GO:0080183: response to photooxidative stress	3.47E-04
33	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.47E-04
34	GO:0010618: aerenchyma formation	3.47E-04
35	GO:0031349: positive regulation of defense response	3.47E-04
36	GO:0042939: tripeptide transport	3.47E-04
37	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.47E-04
38	GO:0009863: salicylic acid mediated signaling pathway	5.64E-04
39	GO:0080147: root hair cell development	5.64E-04
40	GO:0006011: UDP-glucose metabolic process	5.68E-04
41	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	5.68E-04
42	GO:0002230: positive regulation of defense response to virus by host	5.68E-04
43	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	5.68E-04
44	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	5.68E-04
45	GO:0071456: cellular response to hypoxia	7.43E-04
46	GO:0006882: cellular zinc ion homeostasis	8.13E-04
47	GO:0019438: aromatic compound biosynthetic process	8.13E-04
48	GO:0002239: response to oomycetes	8.13E-04
49	GO:0009052: pentose-phosphate shunt, non-oxidative branch	8.13E-04
50	GO:0009226: nucleotide-sugar biosynthetic process	8.13E-04
51	GO:0006612: protein targeting to membrane	8.13E-04
52	GO:1902290: positive regulation of defense response to oomycetes	8.13E-04
53	GO:0007165: signal transduction	9.21E-04
54	GO:0009620: response to fungus	9.69E-04
55	GO:0010363: regulation of plant-type hypersensitive response	1.08E-03
56	GO:0071219: cellular response to molecule of bacterial origin	1.08E-03
57	GO:0042938: dipeptide transport	1.08E-03
58	GO:0061025: membrane fusion	1.17E-03
59	GO:0048544: recognition of pollen	1.17E-03
60	GO:0006886: intracellular protein transport	1.23E-03
61	GO:0002229: defense response to oomycetes	1.34E-03
62	GO:0018344: protein geranylgeranylation	1.36E-03
63	GO:0010225: response to UV-C	1.36E-03
64	GO:0030041: actin filament polymerization	1.36E-03
65	GO:0010942: positive regulation of cell death	1.67E-03
66	GO:0006555: methionine metabolic process	1.67E-03
67	GO:0010555: response to mannitol	2.01E-03
68	GO:0010310: regulation of hydrogen peroxide metabolic process	2.01E-03
69	GO:2000067: regulation of root morphogenesis	2.01E-03
70	GO:0019509: L-methionine salvage from methylthioadenosine	2.01E-03
71	GO:0000911: cytokinesis by cell plate formation	2.01E-03
72	GO:0009612: response to mechanical stimulus	2.01E-03
73	GO:0009816: defense response to bacterium, incompatible interaction	2.03E-03
74	GO:0009627: systemic acquired resistance	2.14E-03
75	GO:0010044: response to aluminum ion	2.36E-03
76	GO:0019745: pentacyclic triterpenoid biosynthetic process	2.36E-03
77	GO:1900057: positive regulation of leaf senescence	2.36E-03
78	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.48E-03
79	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.73E-03
80	GO:0055114: oxidation-reduction process	3.02E-03
81	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.12E-03
82	GO:0007186: G-protein coupled receptor signaling pathway	3.12E-03
83	GO:0009821: alkaloid biosynthetic process	3.53E-03
84	GO:0051865: protein autoubiquitination	3.53E-03
85	GO:0010112: regulation of systemic acquired resistance	3.53E-03
86	GO:0006631: fatty acid metabolic process	3.74E-03
87	GO:0071577: zinc II ion transmembrane transport	3.96E-03
88	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.96E-03
89	GO:0000209: protein polyubiquitination	4.22E-03
90	GO:0006032: chitin catabolic process	4.40E-03
91	GO:0030148: sphingolipid biosynthetic process	4.86E-03
92	GO:0009682: induced systemic resistance	4.86E-03
93	GO:0019684: photosynthesis, light reaction	4.86E-03
94	GO:0009750: response to fructose	4.86E-03
95	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.90E-03
96	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	5.34E-03
97	GO:0006790: sulfur compound metabolic process	5.34E-03
98	GO:0012501: programmed cell death	5.34E-03
99	GO:0002213: defense response to insect	5.34E-03
100	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.34E-03
101	GO:0055046: microgametogenesis	5.83E-03
102	GO:0006807: nitrogen compound metabolic process	5.83E-03
103	GO:0050832: defense response to fungus	6.36E-03
104	GO:0046854: phosphatidylinositol phosphorylation	6.86E-03
105	GO:0009626: plant-type hypersensitive response	6.87E-03
106	GO:0016042: lipid catabolic process	7.77E-03
107	GO:0006629: lipid metabolic process	8.06E-03
108	GO:0016998: cell wall macromolecule catabolic process	9.10E-03
109	GO:0048278: vesicle docking	9.10E-03
110	GO:0003333: amino acid transmembrane transport	9.10E-03
111	GO:0031348: negative regulation of defense response	9.69E-03
112	GO:0019748: secondary metabolic process	9.69E-03
113	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.69E-03
114	GO:0009058: biosynthetic process	1.03E-02
115	GO:0009625: response to insect	1.03E-02
116	GO:0009561: megagametogenesis	1.09E-02
117	GO:0009306: protein secretion	1.09E-02
118	GO:0010150: leaf senescence	1.34E-02
119	GO:0009749: response to glucose	1.42E-02
120	GO:0000302: response to reactive oxygen species	1.50E-02
121	GO:0007166: cell surface receptor signaling pathway	1.54E-02
122	GO:0007264: small GTPase mediated signal transduction	1.57E-02
123	GO:0016032: viral process	1.57E-02
124	GO:0010468: regulation of gene expression	1.61E-02
125	GO:0015031: protein transport	1.61E-02
126	GO:0006464: cellular protein modification process	1.71E-02
127	GO:0009615: response to virus	1.94E-02
128	GO:0001666: response to hypoxia	1.94E-02
129	GO:0006906: vesicle fusion	2.10E-02
130	GO:0016311: dephosphorylation	2.26E-02
131	GO:0055085: transmembrane transport	2.26E-02
132	GO:0009817: defense response to fungus, incompatible interaction	2.34E-02
133	GO:0030244: cellulose biosynthetic process	2.34E-02
134	GO:0006499: N-terminal protein myristoylation	2.51E-02
135	GO:0007568: aging	2.60E-02
136	GO:0006865: amino acid transport	2.69E-02
137	GO:0016192: vesicle-mediated transport	2.72E-02
138	GO:0009867: jasmonic acid mediated signaling pathway	2.78E-02
139	GO:0030001: metal ion transport	3.05E-02
140	GO:0006887: exocytosis	3.14E-02
141	GO:0042542: response to hydrogen peroxide	3.23E-02
142	GO:0009744: response to sucrose	3.32E-02
143	GO:0009636: response to toxic substance	3.61E-02
144	GO:0042538: hyperosmotic salinity response	3.91E-02
145	GO:0006979: response to oxidative stress	4.07E-02
146	GO:0009753: response to jasmonic acid	4.09E-02
147	GO:0009809: lignin biosynthetic process	4.11E-02
148	GO:0051603: proteolysis involved in cellular protein catabolic process	4.21E-02
149	GO:0010224: response to UV-B	4.21E-02
150	GO:0006857: oligopeptide transport	4.31E-02

Rank	GO Term	Adjusted P value
1	GO:0005092: GDP-dissociation inhibitor activity	0.00E+00
2	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
3	GO:0016301: kinase activity	1.39E-08
4	GO:0004674: protein serine/threonine kinase activity	2.44E-07
5	GO:0004656: procollagen-proline 4-dioxygenase activity	5.78E-07
6	GO:0004449: isocitrate dehydrogenase (NAD+) activity	9.86E-06
7	GO:0005524: ATP binding	1.25E-05
8	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.37E-05
9	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.52E-04
10	GO:0050577: GDP-L-fucose synthase activity	1.52E-04
11	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	1.52E-04
12	GO:0003987: acetate-CoA ligase activity	1.52E-04
13	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	1.52E-04
14	GO:0004806: triglyceride lipase activity	2.20E-04
15	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.07E-04
16	GO:0004776: succinate-CoA ligase (GDP-forming) activity	3.47E-04
17	GO:0010297: heteropolysaccharide binding	3.47E-04
18	GO:0004775: succinate-CoA ligase (ADP-forming) activity	3.47E-04
19	GO:0050736: O-malonyltransferase activity	3.47E-04
20	GO:0045140: inositol phosphoceramide synthase activity	3.47E-04
21	GO:0042937: tripeptide transporter activity	3.47E-04
22	GO:0005198: structural molecule activity	5.57E-04
23	GO:0031418: L-ascorbic acid binding	5.64E-04
24	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	5.68E-04
25	GO:0001664: G-protein coupled receptor binding	5.68E-04
26	GO:0005093: Rab GDP-dissociation inhibitor activity	5.68E-04
27	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	5.68E-04
28	GO:0031683: G-protein beta/gamma-subunit complex binding	5.68E-04
29	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	5.68E-04
30	GO:0004751: ribose-5-phosphate isomerase activity	5.68E-04
31	GO:0004383: guanylate cyclase activity	5.68E-04
32	GO:0004707: MAP kinase activity	6.79E-04
33	GO:0042299: lupeol synthase activity	8.13E-04
34	GO:0042936: dipeptide transporter activity	1.08E-03
35	GO:0016866: intramolecular transferase activity	1.08E-03
36	GO:0016004: phospholipase activator activity	1.08E-03
37	GO:0030276: clathrin binding	1.09E-03
38	GO:0015035: protein disulfide oxidoreductase activity	1.12E-03
39	GO:0015301: anion:anion antiporter activity	1.36E-03
40	GO:0005452: inorganic anion exchanger activity	1.36E-03
41	GO:0017137: Rab GTPase binding	1.36E-03
42	GO:0047714: galactolipase activity	1.67E-03
43	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.67E-03
44	GO:0016208: AMP binding	1.67E-03
45	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.67E-03
46	GO:0009055: electron carrier activity	1.79E-03
47	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.01E-03
48	GO:0102391: decanoate--CoA ligase activity	2.01E-03
49	GO:0030247: polysaccharide binding	2.26E-03
50	GO:0004467: long-chain fatty acid-CoA ligase activity	2.36E-03
51	GO:0008312: 7S RNA binding	2.73E-03
52	GO:0052747: sinapyl alcohol dehydrogenase activity	2.73E-03
53	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	3.12E-03
54	GO:0016844: strictosidine synthase activity	3.96E-03
55	GO:0005484: SNAP receptor activity	4.05E-03
56	GO:0004568: chitinase activity	4.40E-03
57	GO:0008171: O-methyltransferase activity	4.40E-03
58	GO:0050660: flavin adenine dinucleotide binding	4.50E-03
59	GO:0008559: xenobiotic-transporting ATPase activity	4.86E-03
60	GO:0061630: ubiquitin protein ligase activity	5.24E-03
61	GO:0045551: cinnamyl-alcohol dehydrogenase activity	5.34E-03
62	GO:0005385: zinc ion transmembrane transporter activity	7.95E-03
63	GO:0016779: nucleotidyltransferase activity	9.69E-03
64	GO:0003756: protein disulfide isomerase activity	1.09E-02
65	GO:0008565: protein transporter activity	1.16E-02
66	GO:0046873: metal ion transmembrane transporter activity	1.29E-02
67	GO:0016853: isomerase activity	1.36E-02
68	GO:0050662: coenzyme binding	1.36E-02
69	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.64E-02
70	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.71E-02
71	GO:0051213: dioxygenase activity	1.94E-02
72	GO:0004672: protein kinase activity	2.00E-02
73	GO:0004683: calmodulin-dependent protein kinase activity	2.18E-02
74	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.26E-02
75	GO:0043531: ADP binding	2.29E-02
76	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.34E-02
77	GO:0005096: GTPase activator activity	2.43E-02
78	GO:0030246: carbohydrate binding	2.43E-02
79	GO:0030145: manganese ion binding	2.60E-02
80	GO:0005507: copper ion binding	2.60E-02
81	GO:0000149: SNARE binding	2.95E-02
82	GO:0005525: GTP binding	3.12E-02
83	GO:0051537: 2 iron, 2 sulfur cluster binding	3.52E-02
84	GO:0005506: iron ion binding	3.95E-02
85	GO:0016298: lipase activity	4.21E-02
86	GO:0015171: amino acid transmembrane transporter activity	4.42E-02
87	GO:0008234: cysteine-type peptidase activity	4.42E-02
88	GO:0045735: nutrient reservoir activity	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	2.22E-07
2	GO:0005911: cell-cell junction	1.52E-04
3	GO:0045252: oxoglutarate dehydrogenase complex	1.52E-04
4	GO:0016021: integral component of membrane	1.57E-04
5	GO:0000325: plant-type vacuole	3.07E-04
6	GO:0005829: cytosol	5.95E-04
7	GO:0005968: Rab-protein geranylgeranyltransferase complex	8.13E-04
8	GO:0030126: COPI vesicle coat	1.36E-03
9	GO:0005783: endoplasmic reticulum	1.67E-03
10	GO:0009514: glyoxysome	3.12E-03
11	GO:0005576: extracellular region	3.46E-03
12	GO:0000139: Golgi membrane	4.99E-03
13	GO:0005737: cytoplasm	6.28E-03
14	GO:0005774: vacuolar membrane	8.58E-03
15	GO:0009543: chloroplast thylakoid lumen	9.73E-03
16	GO:0009504: cell plate	1.42E-02
17	GO:0005789: endoplasmic reticulum membrane	2.12E-02
18	GO:0005643: nuclear pore	2.34E-02
19	GO:0005802: trans-Golgi network	3.02E-02
20	GO:0031201: SNARE complex	3.14E-02
21	GO:0031902: late endosome membrane	3.14E-02
22	GO:0031966: mitochondrial membrane	3.91E-02
23	GO:0005834: heterotrimeric G-protein complex	4.84E-02