Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G04020

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046080: dUTP metabolic process0.00E+00
2GO:0016048: detection of temperature stimulus0.00E+00
3GO:0006216: cytidine catabolic process0.00E+00
4GO:0009202: deoxyribonucleoside triphosphate biosynthetic process0.00E+00
5GO:0009394: 2'-deoxyribonucleotide metabolic process0.00E+00
6GO:0006226: dUMP biosynthetic process0.00E+00
7GO:0006342: chromatin silencing1.91E-09
8GO:0044030: regulation of DNA methylation3.22E-06
9GO:0006260: DNA replication5.98E-06
10GO:0055047: generative cell mitosis1.39E-05
11GO:0006287: base-excision repair, gap-filling1.39E-05
12GO:0045004: DNA replication proofreading1.39E-05
13GO:0051973: positive regulation of telomerase activity1.39E-05
14GO:0010086: embryonic root morphogenesis3.65E-05
15GO:0006297: nucleotide-excision repair, DNA gap filling3.65E-05
16GO:0006272: leading strand elongation3.65E-05
17GO:0042276: error-prone translesion synthesis6.55E-05
18GO:0070828: heterochromatin organization6.55E-05
19GO:0006275: regulation of DNA replication6.55E-05
20GO:0009743: response to carbohydrate9.94E-05
21GO:0000278: mitotic cell cycle1.78E-04
22GO:0048579: negative regulation of long-day photoperiodism, flowering2.22E-04
23GO:0009972: cytidine deamination2.22E-04
24GO:0030162: regulation of proteolysis3.65E-04
25GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process5.23E-04
26GO:0000272: polysaccharide catabolic process6.34E-04
27GO:0016925: protein sumoylation6.93E-04
28GO:0010468: regulation of gene expression7.67E-04
29GO:0010167: response to nitrate8.75E-04
30GO:0051302: regulation of cell division1.07E-03
31GO:0010182: sugar mediated signaling pathway1.56E-03
32GO:0006281: DNA repair1.75E-03
33GO:0006310: DNA recombination2.04E-03
34GO:0009555: pollen development3.06E-03
35GO:0009611: response to wounding3.13E-03
36GO:0042542: response to hydrogen peroxide3.73E-03
37GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.36E-03
38GO:0009909: regulation of flower development5.03E-03
39GO:0048316: seed development5.38E-03
40GO:0016569: covalent chromatin modification5.74E-03
41GO:0009553: embryo sac development5.86E-03
42GO:0009790: embryo development7.78E-03
43GO:0007623: circadian rhythm8.74E-03
44GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process9.45E-03
45GO:0006970: response to osmotic stress1.25E-02
46GO:0045892: negative regulation of transcription, DNA-templated1.59E-02
47GO:0009751: response to salicylic acid1.80E-02
48GO:0009753: response to jasmonic acid1.92E-02
49GO:0009734: auxin-activated signaling pathway2.33E-02
50GO:0009908: flower development2.55E-02
51GO:0009735: response to cytokinin2.57E-02
52GO:0009738: abscisic acid-activated signaling pathway2.68E-02
53GO:0009416: response to light stimulus2.74E-02
54GO:0006511: ubiquitin-dependent protein catabolic process3.41E-02
55GO:0042742: defense response to bacterium4.54E-02
56GO:0009733: response to auxin4.93E-02
RankGO TermAdjusted P value
1GO:0047844: deoxycytidine deaminase activity0.00E+00
2GO:0004170: dUTP diphosphatase activity0.00E+00
3GO:0046982: protein heterodimerization activity3.74E-10
4GO:0003677: DNA binding1.16E-07
5GO:0030337: DNA polymerase processivity factor activity1.39E-05
6GO:0008310: single-stranded DNA 3'-5' exodeoxyribonuclease activity1.39E-05
7GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor3.65E-05
8GO:0031386: protein tag1.78E-04
9GO:0102229: amylopectin maltohydrolase activity2.22E-04
10GO:0004126: cytidine deaminase activity2.68E-04
11GO:0016161: beta-amylase activity2.68E-04
12GO:0008271: secondary active sulfate transmembrane transporter activity4.16E-04
13GO:0015116: sulfate transmembrane transporter activity6.93E-04
14GO:0003712: transcription cofactor activity8.75E-04
15GO:0003887: DNA-directed DNA polymerase activity9.38E-04
16GO:0004402: histone acetyltransferase activity1.49E-03
17GO:0015293: symporter activity4.15E-03
18GO:0031625: ubiquitin protein ligase binding5.03E-03
19GO:0004386: helicase activity6.35E-03
20GO:0042802: identical protein binding1.03E-02
21GO:0000287: magnesium ion binding1.17E-02
22GO:0003682: chromatin binding1.24E-02
23GO:0005515: protein binding1.43E-02
24GO:0004871: signal transducer activity1.62E-02
25GO:0042803: protein homodimerization activity1.62E-02
26GO:0005516: calmodulin binding3.67E-02
RankGO TermAdjusted P value
1GO:0005721: pericentric heterochromatin0.00E+00
2GO:0000786: nucleosome6.82E-13
3GO:0000790: nuclear chromatin1.32E-09
4GO:0005971: ribonucleoside-diphosphate reductase complex1.39E-05
5GO:0008622: epsilon DNA polymerase complex1.39E-05
6GO:0001673: male germ cell nucleus3.65E-05
7GO:0000792: heterochromatin3.65E-05
8GO:0019005: SCF ubiquitin ligase complex1.16E-04
9GO:0005634: nucleus1.51E-03
10GO:0005730: nucleolus1.52E-03
11GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.27E-02
12GO:0005887: integral component of plasma membrane2.27E-02
13GO:0005829: cytosol4.41E-02
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Gene type



Gene DE type