co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G03860

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0044794: positive regulation by host of viral process	0.00E+00
2	GO:0034050: host programmed cell death induced by symbiont	0.00E+00
3	GO:0006412: translation	4.38E-13
4	GO:0042254: ribosome biogenesis	6.08E-08
5	GO:0002181: cytoplasmic translation	9.05E-08
6	GO:0000494: box C/D snoRNA 3'-end processing	1.67E-05
7	GO:1990258: histone glutamine methylation	1.67E-05
8	GO:0006413: translational initiation	4.07E-05
9	GO:0045905: positive regulation of translational termination	4.35E-05
10	GO:0045901: positive regulation of translational elongation	4.35E-05
11	GO:0006452: translational frameshifting	4.35E-05
12	GO:0006457: protein folding	5.47E-05
13	GO:1902626: assembly of large subunit precursor of preribosome	7.77E-05
14	GO:0055074: calcium ion homeostasis	7.77E-05
15	GO:0070301: cellular response to hydrogen peroxide	1.17E-04
16	GO:0006241: CTP biosynthetic process	1.17E-04
17	GO:0006165: nucleoside diphosphate phosphorylation	1.17E-04
18	GO:0006228: UTP biosynthetic process	1.17E-04
19	GO:0006183: GTP biosynthetic process	1.61E-04
20	GO:0031167: rRNA methylation	2.09E-04
21	GO:0046686: response to cadmium ion	2.61E-04
22	GO:0009955: adaxial/abaxial pattern specification	3.11E-04
23	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.11E-04
24	GO:0009846: pollen germination	3.14E-04
25	GO:0030968: endoplasmic reticulum unfolded protein response	4.82E-04
26	GO:0001510: RNA methylation	4.82E-04
27	GO:0006189: 'de novo' IMP biosynthetic process	5.42E-04
28	GO:0015780: nucleotide-sugar transport	5.42E-04
29	GO:0012501: programmed cell death	8.01E-04
30	GO:0006820: anion transport	8.01E-04
31	GO:0006626: protein targeting to mitochondrion	8.70E-04
32	GO:0048467: gynoecium development	9.39E-04
33	GO:0034976: response to endoplasmic reticulum stress	1.08E-03
34	GO:0000027: ribosomal large subunit assembly	1.16E-03
35	GO:0030150: protein import into mitochondrial matrix	1.16E-03
36	GO:0008033: tRNA processing	1.73E-03
37	GO:0000413: protein peptidyl-prolyl isomerization	1.73E-03
38	GO:0016032: viral process	2.18E-03
39	GO:0030163: protein catabolic process	2.28E-03
40	GO:0006906: vesicle fusion	2.88E-03
41	GO:0009793: embryo development ending in seed dormancy	3.02E-03
42	GO:0006811: ion transport	3.42E-03
43	GO:0009555: pollen development	3.83E-03
44	GO:0006887: exocytosis	4.23E-03
45	GO:0009744: response to sucrose	4.47E-03
46	GO:0009651: response to salt stress	4.83E-03
47	GO:0006364: rRNA processing	5.48E-03
48	GO:0006486: protein glycosylation	5.48E-03
49	GO:0051603: proteolysis involved in cellular protein catabolic process	5.61E-03
50	GO:0009553: embryo sac development	6.84E-03
51	GO:0042742: defense response to bacterium	7.73E-03
52	GO:0009790: embryo development	9.10E-03
53	GO:0006633: fatty acid biosynthetic process	9.58E-03
54	GO:0009617: response to bacterium	1.16E-02
55	GO:0016192: vesicle-mediated transport	1.68E-02
56	GO:0045454: cell redox homeostasis	1.84E-02
57	GO:0048364: root development	2.21E-02
58	GO:0009734: auxin-activated signaling pathway	2.73E-02
59	GO:0009611: response to wounding	3.27E-02
60	GO:0055085: transmembrane transport	3.82E-02
61	GO:0006511: ubiquitin-dependent protein catabolic process	4.01E-02

Rank	GO Term	Adjusted P value
1	GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity	0.00E+00
2	GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity	0.00E+00
3	GO:0003735: structural constituent of ribosome	1.52E-15
4	GO:1990259: histone-glutamine methyltransferase activity	1.67E-05
5	GO:0004638: phosphoribosylaminoimidazole carboxylase activity	1.67E-05
6	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	1.67E-05
7	GO:0003729: mRNA binding	2.11E-05
8	GO:0003743: translation initiation factor activity	5.77E-05
9	GO:0008649: rRNA methyltransferase activity	7.77E-05
10	GO:0070180: large ribosomal subunit rRNA binding	7.77E-05
11	GO:0000030: mannosyltransferase activity	7.77E-05
12	GO:0005460: UDP-glucose transmembrane transporter activity	1.17E-04
13	GO:0004550: nucleoside diphosphate kinase activity	1.17E-04
14	GO:0003746: translation elongation factor activity	1.91E-04
15	GO:0005459: UDP-galactose transmembrane transporter activity	2.09E-04
16	GO:0031369: translation initiation factor binding	2.59E-04
17	GO:0030515: snoRNA binding	3.66E-04
18	GO:0043022: ribosome binding	4.23E-04
19	GO:0015288: porin activity	4.23E-04
20	GO:0008308: voltage-gated anion channel activity	4.82E-04
21	GO:0019843: rRNA binding	5.92E-04
22	GO:0015266: protein channel activity	8.70E-04
23	GO:0004298: threonine-type endopeptidase activity	1.31E-03
24	GO:0003756: protein disulfide isomerase activity	1.56E-03
25	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.20E-03
26	GO:0000149: SNARE binding	3.99E-03
27	GO:0005484: SNAP receptor activity	4.47E-03
28	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.96E-03
29	GO:0051287: NAD binding	5.09E-03
30	GO:0051082: unfolded protein binding	6.99E-03
31	GO:0005509: calcium ion binding	7.13E-03
32	GO:0005515: protein binding	7.86E-03
33	GO:0003723: RNA binding	1.41E-02
34	GO:0008233: peptidase activity	1.60E-02
35	GO:0003924: GTPase activity	2.14E-02
36	GO:0000166: nucleotide binding	3.22E-02
37	GO:0030246: carbohydrate binding	3.98E-02
38	GO:0005507: copper ion binding	4.14E-02
39	GO:0005516: calmodulin binding	4.31E-02

Rank	GO Term	Adjusted P value
1	GO:0022625: cytosolic large ribosomal subunit	2.79E-17
2	GO:0005840: ribosome	1.38E-13
3	GO:0022626: cytosolic ribosome	1.23E-11
4	GO:0009506: plasmodesma	3.32E-08
5	GO:0005730: nucleolus	6.64E-08
6	GO:0005737: cytoplasm	3.63E-07
7	GO:0005788: endoplasmic reticulum lumen	1.87E-06
8	GO:0005773: vacuole	3.35E-06
9	GO:0015934: large ribosomal subunit	3.50E-06
10	GO:0005783: endoplasmic reticulum	8.12E-06
11	GO:0005852: eukaryotic translation initiation factor 3 complex	1.03E-05
12	GO:0005774: vacuolar membrane	1.28E-05
13	GO:0071541: eukaryotic translation initiation factor 3 complex, eIF3m	1.67E-05
14	GO:0005829: cytosol	2.36E-05
15	GO:0009507: chloroplast	5.69E-05
16	GO:0031428: box C/D snoRNP complex	2.59E-04
17	GO:0016020: membrane	4.32E-04
18	GO:0046930: pore complex	4.82E-04
19	GO:0005742: mitochondrial outer membrane translocase complex	4.82E-04
20	GO:0015030: Cajal body	6.04E-04
21	GO:0032040: small-subunit processome	8.01E-04
22	GO:0030176: integral component of endoplasmic reticulum membrane	1.01E-03
23	GO:0005741: mitochondrial outer membrane	1.31E-03
24	GO:0005839: proteasome core complex	1.31E-03
25	GO:0005886: plasma membrane	3.16E-03
26	GO:0031201: SNARE complex	4.23E-03
27	GO:0048046: apoplast	5.35E-03
28	GO:0000502: proteasome complex	5.48E-03
29	GO:0005789: endoplasmic reticulum membrane	1.18E-02
30	GO:0022627: cytosolic small ribosomal subunit	1.25E-02
31	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.49E-02
32	GO:0005743: mitochondrial inner membrane	2.03E-02
33	GO:0005777: peroxisome	3.55E-02
34	GO:0009941: chloroplast envelope	3.65E-02