co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G02870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0001881: receptor recycling	0.00E+00
2	GO:0000494: box C/D snoRNA 3'-end processing	9.64E-06
3	GO:0009962: regulation of flavonoid biosynthetic process	9.64E-06
4	GO:1990258: histone glutamine methylation	9.64E-06
5	GO:0045039: protein import into mitochondrial inner membrane	4.69E-05
6	GO:0008333: endosome to lysosome transport	4.69E-05
7	GO:0006515: misfolded or incompletely synthesized protein catabolic process	7.16E-05
8	GO:0051205: protein insertion into membrane	9.96E-05
9	GO:0009755: hormone-mediated signaling pathway	9.96E-05
10	GO:0031167: rRNA methylation	1.30E-04
11	GO:0006461: protein complex assembly	1.30E-04
12	GO:0006364: rRNA processing	1.69E-04
13	GO:0001510: RNA methylation	3.11E-04
14	GO:0010204: defense response signaling pathway, resistance gene-independent	3.11E-04
15	GO:0009051: pentose-phosphate shunt, oxidative branch	3.51E-04
16	GO:0010162: seed dormancy process	4.35E-04
17	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.35E-04
18	GO:0006006: glucose metabolic process	5.68E-04
19	GO:0007034: vacuolar transport	6.14E-04
20	GO:0009944: polarity specification of adaxial/abaxial axis	7.58E-04
21	GO:0007005: mitochondrion organization	9.08E-04
22	GO:0009294: DNA mediated transformation	9.61E-04
23	GO:0019722: calcium-mediated signaling	1.01E-03
24	GO:0010091: trichome branching	1.01E-03
25	GO:0042147: retrograde transport, endosome to Golgi	1.07E-03
26	GO:0008033: tRNA processing	1.12E-03
27	GO:0010154: fruit development	1.18E-03
28	GO:0010182: sugar mediated signaling pathway	1.18E-03
29	GO:0006623: protein targeting to vacuole	1.29E-03
30	GO:0048825: cotyledon development	1.29E-03
31	GO:0009749: response to glucose	1.29E-03
32	GO:0045087: innate immune response	2.40E-03
33	GO:0009644: response to high light intensity	3.01E-03
34	GO:0006412: translation	3.55E-03
35	GO:0016569: covalent chromatin modification	4.26E-03
36	GO:0000398: mRNA splicing, via spliceosome	4.89E-03
37	GO:0046686: response to cadmium ion	6.16E-03
38	GO:0042254: ribosome biogenesis	8.86E-03
39	GO:0048366: leaf development	9.80E-03
40	GO:0016192: vesicle-mediated transport	1.05E-02
41	GO:0045454: cell redox homeostasis	1.15E-02
42	GO:0045892: negative regulation of transcription, DNA-templated	1.17E-02
43	GO:0006886: intracellular protein transport	1.18E-02
44	GO:0048364: root development	1.38E-02
45	GO:0006351: transcription, DNA-templated	2.09E-02
46	GO:0045893: positive regulation of transcription, DNA-templated	2.22E-02
47	GO:0006414: translational elongation	2.67E-02
48	GO:0042742: defense response to bacterium	3.33E-02
49	GO:0015031: protein transport	3.95E-02

Rank	GO Term	Adjusted P value
1	GO:0030515: snoRNA binding	1.00E-06
2	GO:1990259: histone-glutamine methyltransferase activity	9.64E-06
3	GO:0042134: rRNA primary transcript binding	9.64E-06
4	GO:0070361: mitochondrial light strand promoter anti-sense binding	2.58E-05
5	GO:0001671: ATPase activator activity	2.58E-05
6	GO:0008649: rRNA methyltransferase activity	4.69E-05
7	GO:0004345: glucose-6-phosphate dehydrogenase activity	9.96E-05
8	GO:0051920: peroxiredoxin activity	1.98E-04
9	GO:0008320: protein transmembrane transporter activity	2.34E-04
10	GO:0016209: antioxidant activity	2.72E-04
11	GO:0001055: RNA polymerase II activity	3.93E-04
12	GO:0001054: RNA polymerase I activity	4.78E-04
13	GO:0001056: RNA polymerase III activity	5.23E-04
14	GO:0004407: histone deacetylase activity	7.58E-04
15	GO:0051087: chaperone binding	8.07E-04
16	GO:0004176: ATP-dependent peptidase activity	8.59E-04
17	GO:0003723: RNA binding	1.06E-03
18	GO:0008236: serine-type peptidase activity	1.98E-03
19	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.05E-03
20	GO:0050897: cobalt ion binding	2.26E-03
21	GO:0003746: translation elongation factor activity	2.40E-03
22	GO:0050661: NADP binding	2.62E-03
23	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.49E-03
24	GO:0005509: calcium ion binding	3.66E-03
25	GO:0008026: ATP-dependent helicase activity	4.61E-03
26	GO:0004252: serine-type endopeptidase activity	5.55E-03
27	GO:0003735: structural constituent of ribosome	7.86E-03
28	GO:0004601: peroxidase activity	8.74E-03
29	GO:0004722: protein serine/threonine phosphatase activity	1.23E-02
30	GO:0003924: GTPase activity	1.34E-02
31	GO:0000166: nucleotide binding	2.01E-02
32	GO:0005525: GTP binding	2.87E-02
33	GO:0003729: mRNA binding	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0034457: Mpp10 complex	0.00E+00
2	GO:0015030: Cajal body	2.89E-06
3	GO:0005730: nucleolus	5.09E-06
4	GO:0032040: small-subunit processome	5.20E-06
5	GO:0005662: DNA replication factor A complex	9.64E-06
6	GO:0030134: ER to Golgi transport vesicle	2.58E-05
7	GO:0030904: retromer complex	1.63E-04
8	GO:0031428: box C/D snoRNP complex	1.63E-04
9	GO:0000974: Prp19 complex	1.63E-04
10	GO:0005771: multivesicular body	1.63E-04
11	GO:0016363: nuclear matrix	1.98E-04
12	GO:0005801: cis-Golgi network	1.98E-04
13	GO:0005736: DNA-directed RNA polymerase I complex	3.51E-04
14	GO:0005666: DNA-directed RNA polymerase III complex	3.93E-04
15	GO:0071011: precatalytic spliceosome	3.93E-04
16	GO:0000418: DNA-directed RNA polymerase IV complex	4.35E-04
17	GO:0071013: catalytic step 2 spliceosome	4.78E-04
18	GO:0005665: DNA-directed RNA polymerase II, core complex	5.23E-04
19	GO:0019013: viral nucleocapsid	5.68E-04
20	GO:0015934: large ribosomal subunit	2.26E-03
21	GO:0031902: late endosome membrane	2.70E-03
22	GO:0005732: small nucleolar ribonucleoprotein complex	4.70E-03
23	GO:0005759: mitochondrial matrix	6.05E-03
24	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	9.33E-03
25	GO:0022625: cytosolic large ribosomal subunit	1.05E-02
26	GO:0005743: mitochondrial inner membrane	1.27E-02
27	GO:0043231: intracellular membrane-bounded organelle	1.43E-02
28	GO:0016020: membrane	1.94E-02
29	GO:0022626: cytosolic ribosome	1.95E-02
30	GO:0005829: cytosol	2.25E-02
31	GO:0005840: ribosome	3.44E-02
32	GO:0005789: endoplasmic reticulum membrane	4.50E-02