Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G02500

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043201: response to leucine0.00E+00
2GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
3GO:0080052: response to histidine0.00E+00
4GO:0042430: indole-containing compound metabolic process0.00E+00
5GO:0080053: response to phenylalanine0.00E+00
6GO:0006793: phosphorus metabolic process0.00E+00
7GO:0051238: sequestering of metal ion0.00E+00
8GO:0006182: cGMP biosynthetic process0.00E+00
9GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
10GO:0010055: atrichoblast differentiation0.00E+00
11GO:0009620: response to fungus5.04E-06
12GO:0009636: response to toxic substance2.32E-05
13GO:0006468: protein phosphorylation3.01E-05
14GO:0009617: response to bacterium4.84E-05
15GO:0009407: toxin catabolic process1.03E-04
16GO:0071456: cellular response to hypoxia1.55E-04
17GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.74E-04
18GO:1900057: positive regulation of leaf senescence2.27E-04
19GO:0051938: L-glutamate import2.89E-04
20GO:0006047: UDP-N-acetylglucosamine metabolic process2.89E-04
21GO:1990641: response to iron ion starvation2.89E-04
22GO:0080173: male-female gamete recognition during double fertilization2.89E-04
23GO:0099132: ATP hydrolysis coupled cation transmembrane transport2.89E-04
24GO:0010726: positive regulation of hydrogen peroxide metabolic process2.89E-04
25GO:0010421: hydrogen peroxide-mediated programmed cell death2.89E-04
26GO:0042759: long-chain fatty acid biosynthetic process2.89E-04
27GO:0019276: UDP-N-acetylgalactosamine metabolic process2.89E-04
28GO:0032107: regulation of response to nutrient levels2.89E-04
29GO:0010120: camalexin biosynthetic process3.53E-04
30GO:0042742: defense response to bacterium4.19E-04
31GO:0019521: D-gluconate metabolic process6.34E-04
32GO:0009866: induced systemic resistance, ethylene mediated signaling pathway6.34E-04
33GO:0006101: citrate metabolic process6.34E-04
34GO:0042939: tripeptide transport6.34E-04
35GO:0043091: L-arginine import6.34E-04
36GO:0051592: response to calcium ion6.34E-04
37GO:0080183: response to photooxidative stress6.34E-04
38GO:0015802: basic amino acid transport6.34E-04
39GO:0009805: coumarin biosynthetic process6.34E-04
40GO:0009682: induced systemic resistance6.77E-04
41GO:0009817: defense response to fungus, incompatible interaction8.19E-04
42GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.03E-03
43GO:0002230: positive regulation of defense response to virus by host1.03E-03
44GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.03E-03
45GO:0034051: negative regulation of plant-type hypersensitive response1.03E-03
46GO:0010351: lithium ion transport1.03E-03
47GO:0006011: UDP-glucose metabolic process1.03E-03
48GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.03E-03
49GO:1902290: positive regulation of defense response to oomycetes1.47E-03
50GO:0006882: cellular zinc ion homeostasis1.47E-03
51GO:0046513: ceramide biosynthetic process1.47E-03
52GO:0006874: cellular calcium ion homeostasis1.49E-03
53GO:0009751: response to salicylic acid1.54E-03
54GO:0003333: amino acid transmembrane transport1.64E-03
55GO:0016998: cell wall macromolecule catabolic process1.64E-03
56GO:0007166: cell surface receptor signaling pathway1.65E-03
57GO:0006536: glutamate metabolic process1.97E-03
58GO:0033358: UDP-L-arabinose biosynthetic process1.97E-03
59GO:0033356: UDP-L-arabinose metabolic process1.97E-03
60GO:0042938: dipeptide transport1.97E-03
61GO:0045227: capsule polysaccharide biosynthetic process1.97E-03
62GO:0046345: abscisic acid catabolic process1.97E-03
63GO:0000304: response to singlet oxygen2.52E-03
64GO:0030041: actin filament polymerization2.52E-03
65GO:0006097: glyoxylate cycle2.52E-03
66GO:0002238: response to molecule of fungal origin3.11E-03
67GO:0006561: proline biosynthetic process3.11E-03
68GO:0010942: positive regulation of cell death3.11E-03
69GO:0015691: cadmium ion transport3.11E-03
70GO:0010256: endomembrane system organization3.11E-03
71GO:0010555: response to mannitol3.74E-03
72GO:2000067: regulation of root morphogenesis3.74E-03
73GO:0010200: response to chitin3.82E-03
74GO:0006952: defense response4.17E-03
75GO:0055114: oxidation-reduction process4.28E-03
76GO:1900056: negative regulation of leaf senescence4.41E-03
77GO:0019745: pentacyclic triterpenoid biosynthetic process4.41E-03
78GO:0050829: defense response to Gram-negative bacterium4.41E-03
79GO:0030026: cellular manganese ion homeostasis4.41E-03
80GO:0000122: negative regulation of transcription from RNA polymerase II promoter4.41E-03
81GO:0009611: response to wounding4.51E-03
82GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.12E-03
83GO:0030091: protein repair5.12E-03
84GO:0009850: auxin metabolic process5.12E-03
85GO:0006102: isocitrate metabolic process5.12E-03
86GO:0050832: defense response to fungus5.67E-03
87GO:0007186: G-protein coupled receptor signaling pathway5.87E-03
88GO:0010497: plasmodesmata-mediated intercellular transport5.87E-03
89GO:0009699: phenylpropanoid biosynthetic process5.87E-03
90GO:0016042: lipid catabolic process6.28E-03
91GO:0009832: plant-type cell wall biogenesis6.53E-03
92GO:0006098: pentose-phosphate shunt6.65E-03
93GO:0009821: alkaloid biosynthetic process6.65E-03
94GO:0007568: aging7.19E-03
95GO:2000280: regulation of root development7.48E-03
96GO:1900426: positive regulation of defense response to bacterium7.48E-03
97GO:0006099: tricarboxylic acid cycle8.24E-03
98GO:0055062: phosphate ion homeostasis8.33E-03
99GO:0006032: chitin catabolic process8.33E-03
100GO:0009750: response to fructose9.22E-03
101GO:0006631: fatty acid metabolic process9.37E-03
102GO:0002213: defense response to insect1.01E-02
103GO:0015706: nitrate transport1.01E-02
104GO:0006807: nitrogen compound metabolic process1.11E-02
105GO:0006626: protein targeting to mitochondrion1.11E-02
106GO:0055046: microgametogenesis1.11E-02
107GO:0009718: anthocyanin-containing compound biosynthetic process1.11E-02
108GO:0006855: drug transmembrane transport1.19E-02
109GO:0010143: cutin biosynthetic process1.21E-02
110GO:0042538: hyperosmotic salinity response1.28E-02
111GO:0006812: cation transport1.28E-02
112GO:0009225: nucleotide-sugar metabolic process1.31E-02
113GO:0010167: response to nitrate1.31E-02
114GO:0070588: calcium ion transmembrane transport1.31E-02
115GO:0009969: xyloglucan biosynthetic process1.31E-02
116GO:0009809: lignin biosynthetic process1.38E-02
117GO:0010025: wax biosynthetic process1.41E-02
118GO:0006979: response to oxidative stress1.50E-02
119GO:0000027: ribosomal large subunit assembly1.52E-02
120GO:0030150: protein import into mitochondrial matrix1.52E-02
121GO:0080147: root hair cell development1.52E-02
122GO:0005992: trehalose biosynthetic process1.52E-02
123GO:0019748: secondary metabolic process1.86E-02
124GO:0010227: floral organ abscission1.98E-02
125GO:0006012: galactose metabolic process1.98E-02
126GO:0009561: megagametogenesis2.10E-02
127GO:0042391: regulation of membrane potential2.35E-02
128GO:0032259: methylation2.46E-02
129GO:0006885: regulation of pH2.48E-02
130GO:0009058: biosynthetic process2.59E-02
131GO:0006629: lipid metabolic process2.60E-02
132GO:0048544: recognition of pollen2.61E-02
133GO:0006814: sodium ion transport2.61E-02
134GO:0006623: protein targeting to vacuole2.75E-02
135GO:0009749: response to glucose2.75E-02
136GO:0002229: defense response to oomycetes2.88E-02
137GO:0010193: response to ozone2.88E-02
138GO:0032502: developmental process3.02E-02
139GO:0006633: fatty acid biosynthetic process3.09E-02
140GO:0010252: auxin homeostasis3.31E-02
141GO:0010150: leaf senescence3.39E-02
142GO:0051607: defense response to virus3.60E-02
143GO:0009615: response to virus3.75E-02
144GO:0009816: defense response to bacterium, incompatible interaction3.90E-02
145GO:0009607: response to biotic stimulus3.90E-02
146GO:0009627: systemic acquired resistance4.05E-02
147GO:0042128: nitrate assimilation4.05E-02
148GO:0006950: response to stress4.21E-02
149GO:0030244: cellulose biosynthetic process4.53E-02
150GO:0008219: cell death4.53E-02
RankGO TermAdjusted P value
1GO:0051670: inulinase activity0.00E+00
2GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
3GO:0004674: protein serine/threonine kinase activity1.05E-05
4GO:0016301: kinase activity1.93E-05
5GO:0005496: steroid binding8.74E-05
6GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.13E-04
7GO:0030145: manganese ion binding1.13E-04
8GO:0102391: decanoate--CoA ligase activity1.74E-04
9GO:0004364: glutathione transferase activity1.93E-04
10GO:0004467: long-chain fatty acid-CoA ligase activity2.27E-04
11GO:0051669: fructan beta-fructosidase activity2.89E-04
12GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity2.89E-04
13GO:0031957: very long-chain fatty acid-CoA ligase activity2.89E-04
14GO:0031219: levanase activity2.89E-04
15GO:0031127: alpha-(1,2)-fucosyltransferase activity2.89E-04
16GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity2.89E-04
17GO:0045735: nutrient reservoir activity4.41E-04
18GO:0005524: ATP binding5.53E-04
19GO:0004775: succinate-CoA ligase (ADP-forming) activity6.34E-04
20GO:0050736: O-malonyltransferase activity6.34E-04
21GO:0042937: tripeptide transporter activity6.34E-04
22GO:0004776: succinate-CoA ligase (GDP-forming) activity6.34E-04
23GO:0004103: choline kinase activity6.34E-04
24GO:0004566: beta-glucuronidase activity6.34E-04
25GO:0050291: sphingosine N-acyltransferase activity6.34E-04
26GO:0003994: aconitate hydratase activity6.34E-04
27GO:0042409: caffeoyl-CoA O-methyltransferase activity1.03E-03
28GO:0031683: G-protein beta/gamma-subunit complex binding1.03E-03
29GO:0004383: guanylate cyclase activity1.03E-03
30GO:0016805: dipeptidase activity1.03E-03
31GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity1.03E-03
32GO:0001664: G-protein coupled receptor binding1.03E-03
33GO:0015181: arginine transmembrane transporter activity1.47E-03
34GO:0042299: lupeol synthase activity1.47E-03
35GO:0010178: IAA-amino acid conjugate hydrolase activity1.47E-03
36GO:0004351: glutamate decarboxylase activity1.47E-03
37GO:0015189: L-lysine transmembrane transporter activity1.47E-03
38GO:0009055: electron carrier activity1.79E-03
39GO:0015369: calcium:proton antiporter activity1.97E-03
40GO:0005313: L-glutamate transmembrane transporter activity1.97E-03
41GO:0016866: intramolecular transferase activity1.97E-03
42GO:0010279: indole-3-acetic acid amido synthetase activity1.97E-03
43GO:0015368: calcium:cation antiporter activity1.97E-03
44GO:0050373: UDP-arabinose 4-epimerase activity1.97E-03
45GO:0042936: dipeptide transporter activity1.97E-03
46GO:0004040: amidase activity2.52E-03
47GO:0010294: abscisic acid glucosyltransferase activity2.52E-03
48GO:0005516: calmodulin binding2.60E-03
49GO:0047714: galactolipase activity3.11E-03
50GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity3.11E-03
51GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity3.11E-03
52GO:0050660: flavin adenine dinucleotide binding3.26E-03
53GO:0033743: peptide-methionine (R)-S-oxide reductase activity3.74E-03
54GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity3.74E-03
55GO:0003978: UDP-glucose 4-epimerase activity3.74E-03
56GO:0004656: procollagen-proline 4-dioxygenase activity3.74E-03
57GO:0008113: peptide-methionine (S)-S-oxide reductase activity3.74E-03
58GO:0008235: metalloexopeptidase activity4.41E-03
59GO:0008121: ubiquinol-cytochrome-c reductase activity4.41E-03
60GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity4.41E-03
61GO:0052747: sinapyl alcohol dehydrogenase activity5.12E-03
62GO:0015491: cation:cation antiporter activity5.12E-03
63GO:0004714: transmembrane receptor protein tyrosine kinase activity5.12E-03
64GO:0004564: beta-fructofuranosidase activity5.12E-03
65GO:0004806: triglyceride lipase activity5.61E-03
66GO:0030247: polysaccharide binding5.61E-03
67GO:0008970: phosphatidylcholine 1-acylhydrolase activity5.87E-03
68GO:0015238: drug transmembrane transporter activity6.53E-03
69GO:0008417: fucosyltransferase activity6.65E-03
70GO:0030246: carbohydrate binding7.28E-03
71GO:0004575: sucrose alpha-glucosidase activity7.48E-03
72GO:0015174: basic amino acid transmembrane transporter activity7.48E-03
73GO:0016844: strictosidine synthase activity7.48E-03
74GO:0015112: nitrate transmembrane transporter activity7.48E-03
75GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors7.88E-03
76GO:0004568: chitinase activity8.33E-03
77GO:0008171: O-methyltransferase activity8.33E-03
78GO:0004177: aminopeptidase activity9.22E-03
79GO:0045551: cinnamyl-alcohol dehydrogenase activity1.01E-02
80GO:0051537: 2 iron, 2 sulfur cluster binding1.10E-02
81GO:0005388: calcium-transporting ATPase activity1.11E-02
82GO:0015266: protein channel activity1.11E-02
83GO:0004022: alcohol dehydrogenase (NAD) activity1.11E-02
84GO:0030553: cGMP binding1.31E-02
85GO:0005217: intracellular ligand-gated ion channel activity1.31E-02
86GO:0004970: ionotropic glutamate receptor activity1.31E-02
87GO:0030552: cAMP binding1.31E-02
88GO:0016298: lipase activity1.42E-02
89GO:0015171: amino acid transmembrane transporter activity1.52E-02
90GO:0001046: core promoter sequence-specific DNA binding1.52E-02
91GO:0031418: L-ascorbic acid binding1.52E-02
92GO:0005216: ion channel activity1.63E-02
93GO:0004707: MAP kinase activity1.75E-02
94GO:0080044: quercetin 7-O-glucosyltransferase activity1.79E-02
95GO:0080043: quercetin 3-O-glucosyltransferase activity1.79E-02
96GO:0052689: carboxylic ester hydrolase activity1.80E-02
97GO:0016779: nucleotidyltransferase activity1.86E-02
98GO:0016757: transferase activity, transferring glycosyl groups1.98E-02
99GO:0015035: protein disulfide oxidoreductase activity2.02E-02
100GO:0016787: hydrolase activity2.04E-02
101GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.20E-02
102GO:0030551: cyclic nucleotide binding2.35E-02
103GO:0005451: monovalent cation:proton antiporter activity2.35E-02
104GO:0005249: voltage-gated potassium channel activity2.35E-02
105GO:0015299: solute:proton antiporter activity2.61E-02
106GO:0005507: copper ion binding2.64E-02
107GO:0030170: pyridoxal phosphate binding2.73E-02
108GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.16E-02
109GO:0015385: sodium:proton antiporter activity3.16E-02
110GO:0020037: heme binding3.20E-02
111GO:0015297: antiporter activity3.24E-02
112GO:0008237: metallopeptidase activity3.45E-02
113GO:0051213: dioxygenase activity3.75E-02
114GO:0008194: UDP-glycosyltransferase activity3.79E-02
115GO:0005509: calcium ion binding3.93E-02
116GO:0009931: calcium-dependent protein serine/threonine kinase activity4.05E-02
117GO:0004683: calmodulin-dependent protein kinase activity4.21E-02
118GO:0005506: iron ion binding4.31E-02
119GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.53E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0016021: integral component of membrane1.99E-07
3GO:0005886: plasma membrane1.44E-05
4GO:0005911: cell-cell junction2.89E-04
5GO:0030658: transport vesicle membrane1.47E-03
6GO:0005770: late endosome2.67E-03
7GO:0005783: endoplasmic reticulum3.27E-03
8GO:0032580: Golgi cisterna membrane3.99E-03
9GO:0031305: integral component of mitochondrial inner membrane5.12E-03
10GO:0005576: extracellular region6.02E-03
11GO:0048046: apoplast9.09E-03
12GO:0005765: lysosomal membrane9.22E-03
13GO:0005750: mitochondrial respiratory chain complex III1.21E-02
14GO:0005744: mitochondrial inner membrane presequence translocase complex2.10E-02
15GO:0005794: Golgi apparatus2.26E-02
16GO:0009543: chloroplast thylakoid lumen2.46E-02
17GO:0005618: cell wall2.71E-02
18GO:0019898: extrinsic component of membrane2.75E-02
19GO:0043231: intracellular membrane-bounded organelle2.93E-02
20GO:0016020: membrane3.13E-02
21GO:0071944: cell periphery3.16E-02
22GO:0009705: plant-type vacuole membrane3.39E-02
23GO:0005737: cytoplasm3.58E-02
24GO:0005829: cytosol4.33E-02
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Gene type



Gene DE type