GO Enrichment Analysis of Co-expressed Genes with
AT1G01610
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1904964: positive regulation of phytol biosynthetic process | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 4 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 5 | GO:1904966: positive regulation of vitamin E biosynthetic process | 0.00E+00 |
| 6 | GO:0009773: photosynthetic electron transport in photosystem I | 1.51E-07 |
| 7 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.62E-06 |
| 8 | GO:0015979: photosynthesis | 4.01E-06 |
| 9 | GO:0018298: protein-chromophore linkage | 2.51E-05 |
| 10 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 6.12E-05 |
| 11 | GO:0042335: cuticle development | 9.90E-05 |
| 12 | GO:0010196: nonphotochemical quenching | 1.13E-04 |
| 13 | GO:0008610: lipid biosynthetic process | 1.45E-04 |
| 14 | GO:0032544: plastid translation | 1.81E-04 |
| 15 | GO:0071482: cellular response to light stimulus | 1.81E-04 |
| 16 | GO:0070509: calcium ion import | 1.84E-04 |
| 17 | GO:0007263: nitric oxide mediated signal transduction | 1.84E-04 |
| 18 | GO:0043489: RNA stabilization | 1.84E-04 |
| 19 | GO:0000373: Group II intron splicing | 2.21E-04 |
| 20 | GO:0006352: DNA-templated transcription, initiation | 3.60E-04 |
| 21 | GO:0006869: lipid transport | 4.06E-04 |
| 22 | GO:0009637: response to blue light | 4.90E-04 |
| 23 | GO:0010025: wax biosynthetic process | 6.59E-04 |
| 24 | GO:0051604: protein maturation | 6.76E-04 |
| 25 | GO:0030865: cortical cytoskeleton organization | 6.76E-04 |
| 26 | GO:0000913: preprophase band assembly | 6.76E-04 |
| 27 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 6.76E-04 |
| 28 | GO:0009768: photosynthesis, light harvesting in photosystem I | 8.02E-04 |
| 29 | GO:0031408: oxylipin biosynthetic process | 8.78E-04 |
| 30 | GO:2001141: regulation of RNA biosynthetic process | 9.65E-04 |
| 31 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 9.65E-04 |
| 32 | GO:0006096: glycolytic process | 1.20E-03 |
| 33 | GO:0010021: amylopectin biosynthetic process | 1.28E-03 |
| 34 | GO:0009765: photosynthesis, light harvesting | 1.28E-03 |
| 35 | GO:0045727: positive regulation of translation | 1.28E-03 |
| 36 | GO:0015994: chlorophyll metabolic process | 1.28E-03 |
| 37 | GO:2000122: negative regulation of stomatal complex development | 1.28E-03 |
| 38 | GO:0071483: cellular response to blue light | 1.28E-03 |
| 39 | GO:0006564: L-serine biosynthetic process | 1.63E-03 |
| 40 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.63E-03 |
| 41 | GO:0006461: protein complex assembly | 1.63E-03 |
| 42 | GO:0030308: negative regulation of cell growth | 1.63E-03 |
| 43 | GO:0010375: stomatal complex patterning | 1.63E-03 |
| 44 | GO:0000304: response to singlet oxygen | 1.63E-03 |
| 45 | GO:0042549: photosystem II stabilization | 2.01E-03 |
| 46 | GO:0000470: maturation of LSU-rRNA | 2.01E-03 |
| 47 | GO:0009913: epidermal cell differentiation | 2.01E-03 |
| 48 | GO:0010190: cytochrome b6f complex assembly | 2.01E-03 |
| 49 | GO:0009409: response to cold | 2.32E-03 |
| 50 | GO:0030488: tRNA methylation | 2.41E-03 |
| 51 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.41E-03 |
| 52 | GO:0010027: thylakoid membrane organization | 2.50E-03 |
| 53 | GO:0006400: tRNA modification | 2.83E-03 |
| 54 | GO:0010374: stomatal complex development | 2.83E-03 |
| 55 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.83E-03 |
| 56 | GO:0009645: response to low light intensity stimulus | 2.83E-03 |
| 57 | GO:0015995: chlorophyll biosynthetic process | 2.94E-03 |
| 58 | GO:0005978: glycogen biosynthetic process | 3.28E-03 |
| 59 | GO:0009657: plastid organization | 3.75E-03 |
| 60 | GO:0010052: guard cell differentiation | 3.75E-03 |
| 61 | GO:0009051: pentose-phosphate shunt, oxidative branch | 4.25E-03 |
| 62 | GO:0006098: pentose-phosphate shunt | 4.25E-03 |
| 63 | GO:0005982: starch metabolic process | 4.76E-03 |
| 64 | GO:0042761: very long-chain fatty acid biosynthetic process | 4.76E-03 |
| 65 | GO:0009735: response to cytokinin | 5.07E-03 |
| 66 | GO:0009658: chloroplast organization | 5.27E-03 |
| 67 | GO:0010114: response to red light | 5.30E-03 |
| 68 | GO:0045036: protein targeting to chloroplast | 5.30E-03 |
| 69 | GO:0006535: cysteine biosynthetic process from serine | 5.30E-03 |
| 70 | GO:0000038: very long-chain fatty acid metabolic process | 5.85E-03 |
| 71 | GO:0006415: translational termination | 5.85E-03 |
| 72 | GO:0009073: aromatic amino acid family biosynthetic process | 5.85E-03 |
| 73 | GO:0006855: drug transmembrane transport | 6.18E-03 |
| 74 | GO:0010152: pollen maturation | 6.43E-03 |
| 75 | GO:0009664: plant-type cell wall organization | 6.65E-03 |
| 76 | GO:0080167: response to karrikin | 6.92E-03 |
| 77 | GO:0006006: glucose metabolic process | 7.03E-03 |
| 78 | GO:0009718: anthocyanin-containing compound biosynthetic process | 7.03E-03 |
| 79 | GO:0006094: gluconeogenesis | 7.03E-03 |
| 80 | GO:0009767: photosynthetic electron transport chain | 7.03E-03 |
| 81 | GO:0010628: positive regulation of gene expression | 7.03E-03 |
| 82 | GO:0006364: rRNA processing | 7.14E-03 |
| 83 | GO:0045893: positive regulation of transcription, DNA-templated | 7.16E-03 |
| 84 | GO:0090351: seedling development | 8.27E-03 |
| 85 | GO:0019344: cysteine biosynthetic process | 9.60E-03 |
| 86 | GO:0007017: microtubule-based process | 1.03E-02 |
| 87 | GO:0009695: jasmonic acid biosynthetic process | 1.03E-02 |
| 88 | GO:0006397: mRNA processing | 1.20E-02 |
| 89 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.25E-02 |
| 90 | GO:0008152: metabolic process | 1.29E-02 |
| 91 | GO:0048443: stamen development | 1.32E-02 |
| 92 | GO:0006952: defense response | 1.39E-02 |
| 93 | GO:0000226: microtubule cytoskeleton organization | 1.48E-02 |
| 94 | GO:0042391: regulation of membrane potential | 1.48E-02 |
| 95 | GO:0080022: primary root development | 1.48E-02 |
| 96 | GO:0048868: pollen tube development | 1.56E-02 |
| 97 | GO:0019252: starch biosynthetic process | 1.73E-02 |
| 98 | GO:0009791: post-embryonic development | 1.73E-02 |
| 99 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.81E-02 |
| 100 | GO:0071554: cell wall organization or biogenesis | 1.81E-02 |
| 101 | GO:0002229: defense response to oomycetes | 1.81E-02 |
| 102 | GO:0016032: viral process | 1.90E-02 |
| 103 | GO:0009828: plant-type cell wall loosening | 2.07E-02 |
| 104 | GO:0071805: potassium ion transmembrane transport | 2.17E-02 |
| 105 | GO:0009416: response to light stimulus | 2.35E-02 |
| 106 | GO:0001666: response to hypoxia | 2.35E-02 |
| 107 | GO:0009816: defense response to bacterium, incompatible interaction | 2.45E-02 |
| 108 | GO:0009826: unidimensional cell growth | 2.63E-02 |
| 109 | GO:0048573: photoperiodism, flowering | 2.64E-02 |
| 110 | GO:0042254: ribosome biogenesis | 2.79E-02 |
| 111 | GO:0030244: cellulose biosynthetic process | 2.84E-02 |
| 112 | GO:0010311: lateral root formation | 2.94E-02 |
| 113 | GO:0006810: transport | 2.98E-02 |
| 114 | GO:0010218: response to far red light | 3.05E-02 |
| 115 | GO:0009407: toxin catabolic process | 3.05E-02 |
| 116 | GO:0009631: cold acclimation | 3.15E-02 |
| 117 | GO:0055085: transmembrane transport | 3.16E-02 |
| 118 | GO:0045087: innate immune response | 3.36E-02 |
| 119 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.50E-02 |
| 120 | GO:0006631: fatty acid metabolic process | 3.80E-02 |
| 121 | GO:0045454: cell redox homeostasis | 4.05E-02 |
| 122 | GO:0009644: response to high light intensity | 4.26E-02 |
| 123 | GO:0009636: response to toxic substance | 4.38E-02 |
| 124 | GO:0009809: lignin biosynthetic process | 4.98E-02 |
| 125 | GO:0006813: potassium ion transport | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005048: signal sequence binding | 0.00E+00 |
| 2 | GO:0005222: intracellular cAMP activated cation channel activity | 0.00E+00 |
| 3 | GO:0038198: auxin receptor activity | 0.00E+00 |
| 4 | GO:0016168: chlorophyll binding | 1.63E-05 |
| 5 | GO:0001053: plastid sigma factor activity | 2.56E-05 |
| 6 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 2.56E-05 |
| 7 | GO:0016987: sigma factor activity | 2.56E-05 |
| 8 | GO:0043495: protein anchor | 2.56E-05 |
| 9 | GO:0019899: enzyme binding | 1.13E-04 |
| 10 | GO:0030941: chloroplast targeting sequence binding | 1.84E-04 |
| 11 | GO:0005221: intracellular cyclic nucleotide activated cation channel activity | 1.84E-04 |
| 12 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.84E-04 |
| 13 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.84E-04 |
| 14 | GO:0004321: fatty-acyl-CoA synthase activity | 1.84E-04 |
| 15 | GO:0019843: rRNA binding | 3.02E-04 |
| 16 | GO:0050017: L-3-cyanoalanine synthase activity | 4.15E-04 |
| 17 | GO:0047746: chlorophyllase activity | 4.15E-04 |
| 18 | GO:0004617: phosphoglycerate dehydrogenase activity | 4.15E-04 |
| 19 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 4.15E-04 |
| 20 | GO:0000822: inositol hexakisphosphate binding | 4.15E-04 |
| 21 | GO:0004802: transketolase activity | 4.15E-04 |
| 22 | GO:0008266: poly(U) RNA binding | 5.30E-04 |
| 23 | GO:0031409: pigment binding | 6.59E-04 |
| 24 | GO:0070330: aromatase activity | 6.76E-04 |
| 25 | GO:0043169: cation binding | 6.76E-04 |
| 26 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 6.76E-04 |
| 27 | GO:0005528: FK506 binding | 7.29E-04 |
| 28 | GO:0015079: potassium ion transmembrane transporter activity | 8.02E-04 |
| 29 | GO:0016149: translation release factor activity, codon specific | 9.65E-04 |
| 30 | GO:0022891: substrate-specific transmembrane transporter activity | 1.04E-03 |
| 31 | GO:0005319: lipid transporter activity | 1.28E-03 |
| 32 | GO:0010011: auxin binding | 1.28E-03 |
| 33 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.28E-03 |
| 34 | GO:0051861: glycolipid binding | 1.28E-03 |
| 35 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.28E-03 |
| 36 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.28E-03 |
| 37 | GO:0018685: alkane 1-monooxygenase activity | 1.63E-03 |
| 38 | GO:0004332: fructose-bisphosphate aldolase activity | 2.01E-03 |
| 39 | GO:0005242: inward rectifier potassium channel activity | 2.41E-03 |
| 40 | GO:0004124: cysteine synthase activity | 2.41E-03 |
| 41 | GO:0005261: cation channel activity | 2.41E-03 |
| 42 | GO:0004620: phospholipase activity | 2.83E-03 |
| 43 | GO:0008312: 7S RNA binding | 3.28E-03 |
| 44 | GO:0004033: aldo-keto reductase (NADP) activity | 3.28E-03 |
| 45 | GO:0052747: sinapyl alcohol dehydrogenase activity | 3.28E-03 |
| 46 | GO:0043022: ribosome binding | 3.28E-03 |
| 47 | GO:0015238: drug transmembrane transporter activity | 3.42E-03 |
| 48 | GO:0008289: lipid binding | 4.01E-03 |
| 49 | GO:0003747: translation release factor activity | 4.25E-03 |
| 50 | GO:0016207: 4-coumarate-CoA ligase activity | 4.25E-03 |
| 51 | GO:0047372: acylglycerol lipase activity | 5.85E-03 |
| 52 | GO:0015386: potassium:proton antiporter activity | 5.85E-03 |
| 53 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.18E-03 |
| 54 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 6.43E-03 |
| 55 | GO:0005262: calcium channel activity | 7.03E-03 |
| 56 | GO:0004565: beta-galactosidase activity | 7.03E-03 |
| 57 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 7.14E-03 |
| 58 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 7.64E-03 |
| 59 | GO:0030552: cAMP binding | 8.27E-03 |
| 60 | GO:0030553: cGMP binding | 8.27E-03 |
| 61 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 8.93E-03 |
| 62 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 8.93E-03 |
| 63 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 8.93E-03 |
| 64 | GO:0016874: ligase activity | 9.58E-03 |
| 65 | GO:0051536: iron-sulfur cluster binding | 9.60E-03 |
| 66 | GO:0043424: protein histidine kinase binding | 1.03E-02 |
| 67 | GO:0005216: ion channel activity | 1.03E-02 |
| 68 | GO:0003924: GTPase activity | 1.14E-02 |
| 69 | GO:0005525: GTP binding | 1.23E-02 |
| 70 | GO:0030551: cyclic nucleotide binding | 1.48E-02 |
| 71 | GO:0050662: coenzyme binding | 1.64E-02 |
| 72 | GO:0015297: antiporter activity | 1.68E-02 |
| 73 | GO:0016787: hydrolase activity | 1.77E-02 |
| 74 | GO:0048038: quinone binding | 1.81E-02 |
| 75 | GO:0005200: structural constituent of cytoskeleton | 2.17E-02 |
| 76 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.24E-02 |
| 77 | GO:0042802: identical protein binding | 2.24E-02 |
| 78 | GO:0016413: O-acetyltransferase activity | 2.26E-02 |
| 79 | GO:0016597: amino acid binding | 2.26E-02 |
| 80 | GO:0004601: peroxidase activity | 2.73E-02 |
| 81 | GO:0008236: serine-type peptidase activity | 2.74E-02 |
| 82 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 2.74E-02 |
| 83 | GO:0016740: transferase activity | 3.01E-02 |
| 84 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.15E-02 |
| 85 | GO:0003746: translation elongation factor activity | 3.36E-02 |
| 86 | GO:0030246: carbohydrate binding | 3.40E-02 |
| 87 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 3.47E-02 |
| 88 | GO:0050661: NADP binding | 3.69E-02 |
| 89 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.69E-02 |
| 90 | GO:0005515: protein binding | 3.81E-02 |
| 91 | GO:0004364: glutathione transferase activity | 3.92E-02 |
| 92 | GO:0004871: signal transducer activity | 4.24E-02 |
| 93 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.26E-02 |
| 94 | GO:0005198: structural molecule activity | 4.38E-02 |
| 95 | GO:0051287: NAD binding | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 6.37E-24 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 1.99E-22 |
| 3 | GO:0009941: chloroplast envelope | 3.43E-12 |
| 4 | GO:0009570: chloroplast stroma | 6.16E-11 |
| 5 | GO:0009534: chloroplast thylakoid | 5.96E-10 |
| 6 | GO:0009579: thylakoid | 1.08E-07 |
| 7 | GO:0042651: thylakoid membrane | 1.07E-06 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.89E-06 |
| 9 | GO:0031977: thylakoid lumen | 2.80E-06 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.82E-06 |
| 11 | GO:0016021: integral component of membrane | 5.22E-05 |
| 12 | GO:0016020: membrane | 1.09E-04 |
| 13 | GO:0009523: photosystem II | 1.36E-04 |
| 14 | GO:0009782: photosystem I antenna complex | 1.84E-04 |
| 15 | GO:0030529: intracellular ribonucleoprotein complex | 2.52E-04 |
| 16 | GO:0080085: signal recognition particle, chloroplast targeting | 4.15E-04 |
| 17 | GO:0030981: cortical microtubule cytoskeleton | 4.15E-04 |
| 18 | GO:0030076: light-harvesting complex | 5.92E-04 |
| 19 | GO:0046658: anchored component of plasma membrane | 7.72E-04 |
| 20 | GO:0005886: plasma membrane | 7.81E-04 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 8.02E-04 |
| 22 | GO:0015630: microtubule cytoskeleton | 9.65E-04 |
| 23 | GO:0009526: plastid envelope | 1.28E-03 |
| 24 | GO:0019898: extrinsic component of membrane | 1.63E-03 |
| 25 | GO:0055035: plastid thylakoid membrane | 1.63E-03 |
| 26 | GO:0009512: cytochrome b6f complex | 1.63E-03 |
| 27 | GO:0010287: plastoglobule | 1.88E-03 |
| 28 | GO:0031359: integral component of chloroplast outer membrane | 2.83E-03 |
| 29 | GO:0009533: chloroplast stromal thylakoid | 2.83E-03 |
| 30 | GO:0009501: amyloplast | 3.28E-03 |
| 31 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 3.75E-03 |
| 32 | GO:0045298: tubulin complex | 4.25E-03 |
| 33 | GO:0031969: chloroplast membrane | 6.92E-03 |
| 34 | GO:0000312: plastid small ribosomal subunit | 7.64E-03 |
| 35 | GO:0030095: chloroplast photosystem II | 7.64E-03 |
| 36 | GO:0043234: protein complex | 8.93E-03 |
| 37 | GO:0015935: small ribosomal subunit | 1.10E-02 |
| 38 | GO:0048046: apoplast | 1.60E-02 |
| 39 | GO:0009522: photosystem I | 1.64E-02 |
| 40 | GO:0005618: cell wall | 1.88E-02 |
| 41 | GO:0009505: plant-type cell wall | 2.36E-02 |
| 42 | GO:0019005: SCF ubiquitin ligase complex | 2.84E-02 |
| 43 | GO:0009707: chloroplast outer membrane | 2.84E-02 |
| 44 | GO:0000151: ubiquitin ligase complex | 2.84E-02 |
| 45 | GO:0031225: anchored component of membrane | 4.08E-02 |