co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G01550

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032497: detection of lipopolysaccharide	0.00E+00
2	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
3	GO:0035266: meristem growth	6.10E-05
4	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	6.10E-05
5	GO:0007292: female gamete generation	6.10E-05
6	GO:0046520: sphingoid biosynthetic process	6.10E-05
7	GO:0009727: detection of ethylene stimulus	1.48E-04
8	GO:0009308: amine metabolic process	1.48E-04
9	GO:0032509: endosome transport via multivesicular body sorting pathway	1.48E-04
10	GO:0050994: regulation of lipid catabolic process	1.48E-04
11	GO:0051788: response to misfolded protein	1.48E-04
12	GO:0051260: protein homooligomerization	2.01E-04
13	GO:1900140: regulation of seedling development	2.51E-04
14	GO:0030029: actin filament-based process	2.51E-04
15	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	2.51E-04
16	GO:0060968: regulation of gene silencing	2.51E-04
17	GO:0010182: sugar mediated signaling pathway	3.35E-04
18	GO:0000578: embryonic axis specification	3.65E-04
19	GO:0006624: vacuolar protein processing	3.65E-04
20	GO:2001289: lipid X metabolic process	3.65E-04
21	GO:0070301: cellular response to hydrogen peroxide	3.65E-04
22	GO:0006809: nitric oxide biosynthetic process	3.65E-04
23	GO:0071281: cellular response to iron ion	4.70E-04
24	GO:0006090: pyruvate metabolic process	6.19E-04
25	GO:0043097: pyrimidine nucleoside salvage	6.19E-04
26	GO:0050665: hydrogen peroxide biosynthetic process	7.57E-04
27	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	7.57E-04
28	GO:0048827: phyllome development	7.57E-04
29	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	7.57E-04
30	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	7.57E-04
31	GO:0048232: male gamete generation	7.57E-04
32	GO:0043248: proteasome assembly	7.57E-04
33	GO:0006206: pyrimidine nucleobase metabolic process	7.57E-04
34	GO:0010311: lateral root formation	8.02E-04
35	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	9.01E-04
36	GO:0009723: response to ethylene	9.56E-04
37	GO:0045087: innate immune response	9.58E-04
38	GO:0006333: chromatin assembly or disassembly	1.05E-03
39	GO:0010044: response to aluminum ion	1.05E-03
40	GO:0009395: phospholipid catabolic process	1.05E-03
41	GO:0046777: protein autophosphorylation	1.13E-03
42	GO:0009690: cytokinin metabolic process	1.21E-03
43	GO:0010078: maintenance of root meristem identity	1.21E-03
44	GO:0016559: peroxisome fission	1.21E-03
45	GO:0006491: N-glycan processing	1.21E-03
46	GO:0030968: endoplasmic reticulum unfolded protein response	1.38E-03
47	GO:0009808: lignin metabolic process	1.38E-03
48	GO:0009051: pentose-phosphate shunt, oxidative branch	1.55E-03
49	GO:0008202: steroid metabolic process	1.73E-03
50	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.73E-03
51	GO:0007064: mitotic sister chromatid cohesion	1.92E-03
52	GO:0048829: root cap development	1.92E-03
53	GO:0010015: root morphogenesis	2.12E-03
54	GO:0052544: defense response by callose deposition in cell wall	2.12E-03
55	GO:0010105: negative regulation of ethylene-activated signaling pathway	2.32E-03
56	GO:0006108: malate metabolic process	2.52E-03
57	GO:0007034: vacuolar transport	2.74E-03
58	GO:0002237: response to molecule of bacterial origin	2.74E-03
59	GO:0009933: meristem structural organization	2.74E-03
60	GO:0090351: seedling development	2.96E-03
61	GO:0007031: peroxisome organization	2.96E-03
62	GO:0010167: response to nitrate	2.96E-03
63	GO:0030433: ubiquitin-dependent ERAD pathway	4.15E-03
64	GO:0040007: growth	4.40E-03
65	GO:0001944: vasculature development	4.40E-03
66	GO:0009625: response to insect	4.40E-03
67	GO:0071215: cellular response to abscisic acid stimulus	4.40E-03
68	GO:0042631: cellular response to water deprivation	5.19E-03
69	GO:0009737: response to abscisic acid	5.37E-03
70	GO:0048544: recognition of pollen	5.74E-03
71	GO:0009749: response to glucose	6.03E-03
72	GO:0006635: fatty acid beta-oxidation	6.32E-03
73	GO:0006914: autophagy	7.21E-03
74	GO:0016192: vesicle-mediated transport	7.91E-03
75	GO:0001666: response to hypoxia	8.16E-03
76	GO:0010029: regulation of seed germination	8.48E-03
77	GO:0009816: defense response to bacterium, incompatible interaction	8.48E-03
78	GO:0042742: defense response to bacterium	8.51E-03
79	GO:0048573: photoperiodism, flowering	9.14E-03
80	GO:0006499: N-terminal protein myristoylation	1.05E-02
81	GO:0010119: regulation of stomatal movement	1.09E-02
82	GO:0009751: response to salicylic acid	1.10E-02
83	GO:0009408: response to heat	1.11E-02
84	GO:0009853: photorespiration	1.16E-02
85	GO:0048364: root development	1.16E-02
86	GO:0006099: tricarboxylic acid cycle	1.20E-02
87	GO:0009640: photomorphogenesis	1.39E-02
88	GO:0009873: ethylene-activated signaling pathway	1.44E-02
89	GO:0009636: response to toxic substance	1.51E-02
90	GO:0009965: leaf morphogenesis	1.51E-02
91	GO:0006813: potassium ion transport	1.71E-02
92	GO:0051603: proteolysis involved in cellular protein catabolic process	1.76E-02
93	GO:0048367: shoot system development	1.97E-02
94	GO:0009626: plant-type hypersensitive response	2.02E-02
95	GO:0009620: response to fungus	2.06E-02
96	GO:0016310: phosphorylation	2.65E-02
97	GO:0009058: biosynthetic process	2.68E-02
98	GO:0006511: ubiquitin-dependent protein catabolic process	2.69E-02
99	GO:0010150: leaf senescence	3.25E-02
100	GO:0010228: vegetative to reproductive phase transition of meristem	3.36E-02
101	GO:0009739: response to gibberellin	3.52E-02
102	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.52E-02
103	GO:0006470: protein dephosphorylation	3.57E-02
104	GO:0007166: cell surface receptor signaling pathway	3.57E-02
105	GO:0008380: RNA splicing	3.68E-02
106	GO:0010468: regulation of gene expression	3.68E-02
107	GO:0006468: protein phosphorylation	3.69E-02
108	GO:0009826: unidimensional cell growth	4.31E-02
109	GO:0009733: response to auxin	4.48E-02
110	GO:0055114: oxidation-reduction process	4.87E-02
111	GO:0048366: leaf development	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	6.10E-05
2	GO:0052595: aliphatic-amine oxidase activity	6.10E-05
3	GO:0000170: sphingosine hydroxylase activity	6.10E-05
4	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	6.10E-05
5	GO:0004112: cyclic-nucleotide phosphodiesterase activity	6.10E-05
6	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	6.10E-05
7	GO:0047209: coniferyl-alcohol glucosyltransferase activity	1.48E-04
8	GO:0004566: beta-glucuronidase activity	1.48E-04
9	GO:0038199: ethylene receptor activity	1.48E-04
10	GO:0042284: sphingolipid delta-4 desaturase activity	1.48E-04
11	GO:0016301: kinase activity	1.71E-04
12	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	2.51E-04
13	GO:0004108: citrate (Si)-synthase activity	3.65E-04
14	GO:0030527: structural constituent of chromatin	3.65E-04
15	GO:0051740: ethylene binding	3.65E-04
16	GO:0004470: malic enzyme activity	4.88E-04
17	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	4.88E-04
18	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	4.88E-04
19	GO:0008948: oxaloacetate decarboxylase activity	6.19E-04
20	GO:0036402: proteasome-activating ATPase activity	7.57E-04
21	GO:0003682: chromatin binding	8.57E-04
22	GO:0004849: uridine kinase activity	9.01E-04
23	GO:0004012: phospholipid-translocating ATPase activity	9.01E-04
24	GO:0008142: oxysterol binding	1.38E-03
25	GO:0004674: protein serine/threonine kinase activity	1.45E-03
26	GO:0071949: FAD binding	1.55E-03
27	GO:0004673: protein histidine kinase activity	1.92E-03
28	GO:0000976: transcription regulatory region sequence-specific DNA binding	2.32E-03
29	GO:0004521: endoribonuclease activity	2.32E-03
30	GO:0008081: phosphoric diester hydrolase activity	2.52E-03
31	GO:0000155: phosphorelay sensor kinase activity	2.52E-03
32	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.52E-03
33	GO:0008131: primary amine oxidase activity	2.74E-03
34	GO:0004175: endopeptidase activity	2.74E-03
35	GO:0005524: ATP binding	2.76E-03
36	GO:0017025: TBP-class protein binding	2.96E-03
37	GO:0043424: protein histidine kinase binding	3.65E-03
38	GO:0042802: identical protein binding	4.99E-03
39	GO:0005249: voltage-gated potassium channel activity	5.19E-03
40	GO:0001085: RNA polymerase II transcription factor binding	5.46E-03
41	GO:0048038: quinone binding	6.32E-03
42	GO:0004197: cysteine-type endopeptidase activity	6.61E-03
43	GO:0000156: phosphorelay response regulator activity	6.91E-03
44	GO:0005200: structural constituent of cytoskeleton	7.52E-03
45	GO:0004806: triglyceride lipase activity	9.14E-03
46	GO:0030247: polysaccharide binding	9.14E-03
47	GO:0004222: metalloendopeptidase activity	1.05E-02
48	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.09E-02
49	GO:0003993: acid phosphatase activity	1.20E-02
50	GO:0004672: protein kinase activity	1.39E-02
51	GO:0035091: phosphatidylinositol binding	1.47E-02
52	GO:0051287: NAD binding	1.59E-02
53	GO:0031625: ubiquitin protein ligase binding	1.84E-02
54	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.06E-02
55	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.06E-02
56	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.83E-02
57	GO:0046872: metal ion binding	2.86E-02
58	GO:0015144: carbohydrate transmembrane transporter activity	2.94E-02
59	GO:0005351: sugar:proton symporter activity	3.20E-02
60	GO:0008194: UDP-glycosyltransferase activity	3.52E-02
61	GO:0005506: iron ion binding	3.93E-02
62	GO:0044212: transcription regulatory region DNA binding	4.00E-02
63	GO:0000287: magnesium ion binding	4.37E-02
64	GO:0046982: protein heterodimerization activity	4.37E-02
65	GO:0016788: hydrolase activity, acting on ester bonds	4.49E-02
66	GO:0050660: flavin adenine dinucleotide binding	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0042406: extrinsic component of endoplasmic reticulum membrane	2.51E-04
2	GO:0000323: lytic vacuole	3.65E-04
3	GO:0008076: voltage-gated potassium channel complex	3.65E-04
4	GO:0005776: autophagosome	4.88E-04
5	GO:0005886: plasma membrane	6.52E-04
6	GO:0005789: endoplasmic reticulum membrane	6.98E-04
7	GO:0031597: cytosolic proteasome complex	9.01E-04
8	GO:0031595: nuclear proteasome complex	1.05E-03
9	GO:0005779: integral component of peroxisomal membrane	1.38E-03
10	GO:0008540: proteasome regulatory particle, base subcomplex	1.73E-03
11	GO:0005765: lysosomal membrane	2.12E-03
12	GO:0005783: endoplasmic reticulum	2.90E-03
13	GO:0045271: respiratory chain complex I	3.65E-03
14	GO:0005777: peroxisome	4.15E-03
15	GO:0031410: cytoplasmic vesicle	4.15E-03
16	GO:0016021: integral component of membrane	6.58E-03
17	GO:0000785: chromatin	6.61E-03
18	GO:0005778: peroxisomal membrane	7.52E-03
19	GO:0005667: transcription factor complex	8.81E-03
20	GO:0000151: ubiquitin ligase complex	9.82E-03
21	GO:0000786: nucleosome	1.12E-02
22	GO:0031902: late endosome membrane	1.31E-02
23	GO:0031966: mitochondrial membrane	1.63E-02
24	GO:0000502: proteasome complex	1.71E-02
25	GO:0005681: spliceosomal complex	1.93E-02
26	GO:0005747: mitochondrial respiratory chain complex I	1.97E-02
27	GO:0010008: endosome membrane	1.97E-02
28	GO:0005623: cell	2.63E-02
29	GO:0005615: extracellular space	3.52E-02
30	GO:0005774: vacuolar membrane	4.06E-02
31	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.73E-02