GO Enrichment Analysis of Co-expressed Genes with
AT1G01540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015822: ornithine transport | 0.00E+00 |
| 2 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 3 | GO:0051503: adenine nucleotide transport | 0.00E+00 |
| 4 | GO:0009416: response to light stimulus | 5.55E-07 |
| 5 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.15E-05 |
| 6 | GO:0006546: glycine catabolic process | 1.15E-05 |
| 7 | GO:0042335: cuticle development | 3.72E-05 |
| 8 | GO:0000902: cell morphogenesis | 1.11E-04 |
| 9 | GO:0006438: valyl-tRNA aminoacylation | 1.16E-04 |
| 10 | GO:0071370: cellular response to gibberellin stimulus | 1.16E-04 |
| 11 | GO:0006723: cuticle hydrocarbon biosynthetic process | 1.16E-04 |
| 12 | GO:0000066: mitochondrial ornithine transport | 1.16E-04 |
| 13 | GO:0000038: very long-chain fatty acid metabolic process | 1.86E-04 |
| 14 | GO:0007154: cell communication | 2.69E-04 |
| 15 | GO:1900111: positive regulation of histone H3-K9 dimethylation | 2.69E-04 |
| 16 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.69E-04 |
| 17 | GO:0048587: regulation of short-day photoperiodism, flowering | 2.69E-04 |
| 18 | GO:0019253: reductive pentose-phosphate cycle | 2.81E-04 |
| 19 | GO:0009744: response to sucrose | 2.96E-04 |
| 20 | GO:0010025: wax biosynthetic process | 3.52E-04 |
| 21 | GO:0006000: fructose metabolic process | 4.45E-04 |
| 22 | GO:0043447: alkane biosynthetic process | 4.45E-04 |
| 23 | GO:0032922: circadian regulation of gene expression | 4.45E-04 |
| 24 | GO:0006696: ergosterol biosynthetic process | 4.45E-04 |
| 25 | GO:0080092: regulation of pollen tube growth | 5.19E-04 |
| 26 | GO:0046902: regulation of mitochondrial membrane permeability | 6.38E-04 |
| 27 | GO:0051016: barbed-end actin filament capping | 6.38E-04 |
| 28 | GO:0009409: response to cold | 6.40E-04 |
| 29 | GO:0016117: carotenoid biosynthetic process | 6.61E-04 |
| 30 | GO:0006085: acetyl-CoA biosynthetic process | 8.47E-04 |
| 31 | GO:2000122: negative regulation of stomatal complex development | 8.47E-04 |
| 32 | GO:0010037: response to carbon dioxide | 8.47E-04 |
| 33 | GO:0015976: carbon utilization | 8.47E-04 |
| 34 | GO:0010583: response to cyclopentenone | 9.98E-04 |
| 35 | GO:0010236: plastoquinone biosynthetic process | 1.07E-03 |
| 36 | GO:1902183: regulation of shoot apical meristem development | 1.07E-03 |
| 37 | GO:0016123: xanthophyll biosynthetic process | 1.07E-03 |
| 38 | GO:0006633: fatty acid biosynthetic process | 1.19E-03 |
| 39 | GO:0042549: photosystem II stabilization | 1.31E-03 |
| 40 | GO:0045926: negative regulation of growth | 1.56E-03 |
| 41 | GO:0017148: negative regulation of translation | 1.56E-03 |
| 42 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.56E-03 |
| 43 | GO:0030497: fatty acid elongation | 1.84E-03 |
| 44 | GO:0010119: regulation of stomatal movement | 1.99E-03 |
| 45 | GO:0007155: cell adhesion | 2.13E-03 |
| 46 | GO:0008610: lipid biosynthetic process | 2.13E-03 |
| 47 | GO:0009850: auxin metabolic process | 2.13E-03 |
| 48 | GO:0045010: actin nucleation | 2.13E-03 |
| 49 | GO:0052543: callose deposition in cell wall | 2.13E-03 |
| 50 | GO:0006002: fructose 6-phosphate metabolic process | 2.43E-03 |
| 51 | GO:0048193: Golgi vesicle transport | 2.43E-03 |
| 52 | GO:2000024: regulation of leaf development | 2.74E-03 |
| 53 | GO:0006754: ATP biosynthetic process | 2.74E-03 |
| 54 | GO:0006810: transport | 2.96E-03 |
| 55 | GO:0016573: histone acetylation | 3.07E-03 |
| 56 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 3.41E-03 |
| 57 | GO:0009773: photosynthetic electron transport in photosystem I | 3.76E-03 |
| 58 | GO:0019684: photosynthesis, light reaction | 3.76E-03 |
| 59 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.76E-03 |
| 60 | GO:0005986: sucrose biosynthetic process | 4.50E-03 |
| 61 | GO:0006006: glucose metabolic process | 4.50E-03 |
| 62 | GO:0030036: actin cytoskeleton organization | 4.50E-03 |
| 63 | GO:0009725: response to hormone | 4.50E-03 |
| 64 | GO:0006094: gluconeogenesis | 4.50E-03 |
| 65 | GO:0009767: photosynthetic electron transport chain | 4.50E-03 |
| 66 | GO:0048316: seed development | 4.58E-03 |
| 67 | GO:0010207: photosystem II assembly | 4.89E-03 |
| 68 | GO:0005985: sucrose metabolic process | 5.29E-03 |
| 69 | GO:0009742: brassinosteroid mediated signaling pathway | 5.65E-03 |
| 70 | GO:0006833: water transport | 5.70E-03 |
| 71 | GO:0006338: chromatin remodeling | 6.12E-03 |
| 72 | GO:0009944: polarity specification of adaxial/abaxial axis | 6.12E-03 |
| 73 | GO:0006418: tRNA aminoacylation for protein translation | 6.56E-03 |
| 74 | GO:0048278: vesicle docking | 7.00E-03 |
| 75 | GO:0019722: calcium-mediated signaling | 8.40E-03 |
| 76 | GO:0000226: microtubule cytoskeleton organization | 9.38E-03 |
| 77 | GO:0080022: primary root development | 9.38E-03 |
| 78 | GO:0034220: ion transmembrane transport | 9.38E-03 |
| 79 | GO:0006342: chromatin silencing | 9.89E-03 |
| 80 | GO:0009741: response to brassinosteroid | 9.89E-03 |
| 81 | GO:0061025: membrane fusion | 1.04E-02 |
| 82 | GO:0019252: starch biosynthetic process | 1.09E-02 |
| 83 | GO:0006635: fatty acid beta-oxidation | 1.15E-02 |
| 84 | GO:0007264: small GTPase mediated signal transduction | 1.20E-02 |
| 85 | GO:0048235: pollen sperm cell differentiation | 1.20E-02 |
| 86 | GO:0046686: response to cadmium ion | 1.24E-02 |
| 87 | GO:0007267: cell-cell signaling | 1.37E-02 |
| 88 | GO:0016126: sterol biosynthetic process | 1.49E-02 |
| 89 | GO:0009860: pollen tube growth | 1.54E-02 |
| 90 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.55E-02 |
| 91 | GO:0042128: nitrate assimilation | 1.61E-02 |
| 92 | GO:0006906: vesicle fusion | 1.61E-02 |
| 93 | GO:0080167: response to karrikin | 1.78E-02 |
| 94 | GO:0048481: plant ovule development | 1.80E-02 |
| 95 | GO:0009853: photorespiration | 2.12E-02 |
| 96 | GO:0016051: carbohydrate biosynthetic process | 2.12E-02 |
| 97 | GO:0006839: mitochondrial transport | 2.33E-02 |
| 98 | GO:0006887: exocytosis | 2.40E-02 |
| 99 | GO:0055114: oxidation-reduction process | 2.56E-02 |
| 100 | GO:0006629: lipid metabolic process | 2.62E-02 |
| 101 | GO:0008152: metabolic process | 2.89E-02 |
| 102 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.22E-02 |
| 103 | GO:0006096: glycolytic process | 3.54E-02 |
| 104 | GO:0048367: shoot system development | 3.63E-02 |
| 105 | GO:0051726: regulation of cell cycle | 4.21E-02 |
| 106 | GO:0005975: carbohydrate metabolic process | 4.23E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 2 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 3 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 4 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 5 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 6 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 6.10E-06 |
| 7 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.12E-05 |
| 8 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.12E-05 |
| 9 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.12E-05 |
| 10 | GO:0009922: fatty acid elongase activity | 1.90E-05 |
| 11 | GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | 1.16E-04 |
| 12 | GO:0008252: nucleotidase activity | 1.16E-04 |
| 13 | GO:0051996: squalene synthase activity | 1.16E-04 |
| 14 | GO:0010313: phytochrome binding | 1.16E-04 |
| 15 | GO:0052638: indole-3-butyrate beta-glucosyltransferase activity | 1.16E-04 |
| 16 | GO:0004832: valine-tRNA ligase activity | 1.16E-04 |
| 17 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.86E-04 |
| 18 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.69E-04 |
| 19 | GO:0000064: L-ornithine transmembrane transporter activity | 2.69E-04 |
| 20 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.69E-04 |
| 21 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.69E-04 |
| 22 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 2.69E-04 |
| 23 | GO:0010291: carotene beta-ring hydroxylase activity | 2.69E-04 |
| 24 | GO:0004047: aminomethyltransferase activity | 2.69E-04 |
| 25 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.45E-04 |
| 26 | GO:0003878: ATP citrate synthase activity | 6.38E-04 |
| 27 | GO:0048027: mRNA 5'-UTR binding | 6.38E-04 |
| 28 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 6.38E-04 |
| 29 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 6.38E-04 |
| 30 | GO:0001872: (1->3)-beta-D-glucan binding | 6.38E-04 |
| 31 | GO:0005471: ATP:ADP antiporter activity | 1.07E-03 |
| 32 | GO:0042578: phosphoric ester hydrolase activity | 1.31E-03 |
| 33 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.31E-03 |
| 34 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.56E-03 |
| 35 | GO:0030247: polysaccharide binding | 1.56E-03 |
| 36 | GO:0004564: beta-fructofuranosidase activity | 2.13E-03 |
| 37 | GO:0035064: methylated histone binding | 2.13E-03 |
| 38 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 2.74E-03 |
| 39 | GO:0004575: sucrose alpha-glucosidase activity | 3.07E-03 |
| 40 | GO:0004089: carbonate dehydratase activity | 4.50E-03 |
| 41 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 4.89E-03 |
| 42 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 7.00E-03 |
| 43 | GO:0004812: aminoacyl-tRNA ligase activity | 8.88E-03 |
| 44 | GO:0019901: protein kinase binding | 1.09E-02 |
| 45 | GO:0004872: receptor activity | 1.09E-02 |
| 46 | GO:0004518: nuclease activity | 1.20E-02 |
| 47 | GO:0051015: actin filament binding | 1.26E-02 |
| 48 | GO:0008483: transaminase activity | 1.37E-02 |
| 49 | GO:0046982: protein heterodimerization activity | 1.40E-02 |
| 50 | GO:0016597: amino acid binding | 1.43E-02 |
| 51 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.47E-02 |
| 52 | GO:0015250: water channel activity | 1.49E-02 |
| 53 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.73E-02 |
| 54 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.92E-02 |
| 55 | GO:0050897: cobalt ion binding | 1.99E-02 |
| 56 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 2.19E-02 |
| 57 | GO:0003993: acid phosphatase activity | 2.19E-02 |
| 58 | GO:0004871: signal transducer activity | 2.23E-02 |
| 59 | GO:0000149: SNARE binding | 2.26E-02 |
| 60 | GO:0050661: NADP binding | 2.33E-02 |
| 61 | GO:0005484: SNAP receptor activity | 2.54E-02 |
| 62 | GO:0004185: serine-type carboxypeptidase activity | 2.54E-02 |
| 63 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.69E-02 |
| 64 | GO:0005198: structural molecule activity | 2.76E-02 |
| 65 | GO:0051287: NAD binding | 2.91E-02 |
| 66 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.79E-02 |
| 67 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.79E-02 |
| 68 | GO:0003779: actin binding | 3.96E-02 |
| 69 | GO:0016887: ATPase activity | 4.05E-02 |
| 70 | GO:0016746: transferase activity, transferring acyl groups | 4.13E-02 |
| 71 | GO:0016758: transferase activity, transferring hexosyl groups | 4.65E-02 |
| 72 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005960: glycine cleavage complex | 6.10E-06 |
| 2 | GO:0009505: plant-type cell wall | 1.12E-04 |
| 3 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.16E-04 |
| 4 | GO:0031519: PcG protein complex | 4.45E-04 |
| 5 | GO:0009570: chloroplast stroma | 5.23E-04 |
| 6 | GO:0009346: citrate lyase complex | 6.38E-04 |
| 7 | GO:0005775: vacuolar lumen | 6.38E-04 |
| 8 | GO:0009941: chloroplast envelope | 7.32E-04 |
| 9 | GO:0009507: chloroplast | 1.02E-03 |
| 10 | GO:0010319: stromule | 1.19E-03 |
| 11 | GO:0009535: chloroplast thylakoid membrane | 1.72E-03 |
| 12 | GO:0000123: histone acetyltransferase complex | 1.84E-03 |
| 13 | GO:0046658: anchored component of plasma membrane | 1.91E-03 |
| 14 | GO:0000786: nucleosome | 2.09E-03 |
| 15 | GO:0005677: chromatin silencing complex | 2.43E-03 |
| 16 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.74E-03 |
| 17 | GO:0009534: chloroplast thylakoid | 2.89E-03 |
| 18 | GO:0031969: chloroplast membrane | 3.05E-03 |
| 19 | GO:0005789: endoplasmic reticulum membrane | 3.18E-03 |
| 20 | GO:0009506: plasmodesma | 3.20E-03 |
| 21 | GO:0016324: apical plasma membrane | 3.41E-03 |
| 22 | GO:0030095: chloroplast photosystem II | 4.89E-03 |
| 23 | GO:0030659: cytoplasmic vesicle membrane | 4.89E-03 |
| 24 | GO:0030176: integral component of endoplasmic reticulum membrane | 5.29E-03 |
| 25 | GO:0009654: photosystem II oxygen evolving complex | 6.56E-03 |
| 26 | GO:0009543: chloroplast thylakoid lumen | 6.67E-03 |
| 27 | GO:0000790: nuclear chromatin | 8.88E-03 |
| 28 | GO:0009504: cell plate | 1.09E-02 |
| 29 | GO:0009523: photosystem II | 1.09E-02 |
| 30 | GO:0019898: extrinsic component of membrane | 1.09E-02 |
| 31 | GO:0009579: thylakoid | 1.30E-02 |
| 32 | GO:0048046: apoplast | 1.44E-02 |
| 33 | GO:0031225: anchored component of membrane | 1.82E-02 |
| 34 | GO:0000325: plant-type vacuole | 1.99E-02 |
| 35 | GO:0031201: SNARE complex | 2.40E-02 |
| 36 | GO:0031902: late endosome membrane | 2.40E-02 |
| 37 | GO:0031977: thylakoid lumen | 2.40E-02 |
| 38 | GO:0005743: mitochondrial inner membrane | 2.44E-02 |
| 39 | GO:0005886: plasma membrane | 2.94E-02 |
| 40 | GO:0005747: mitochondrial respiratory chain complex I | 3.63E-02 |
| 41 | GO:0022626: cytosolic ribosome | 4.44E-02 |
| 42 | GO:0010287: plastoglobule | 4.56E-02 |