co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G01430

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002184: cytoplasmic translational termination	0.00E+00
2	GO:0045176: apical protein localization	0.00E+00
3	GO:0035674: tricarboxylic acid transmembrane transport	0.00E+00
4	GO:0016553: base conversion or substitution editing	0.00E+00
5	GO:0061635: regulation of protein complex stability	0.00E+00
6	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
7	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
8	GO:0006399: tRNA metabolic process	0.00E+00
9	GO:0015979: photosynthesis	3.07E-10
10	GO:0032544: plastid translation	2.20E-07
11	GO:0042335: cuticle development	7.95E-07
12	GO:0009773: photosynthetic electron transport in photosystem I	1.13E-06
13	GO:1902326: positive regulation of chlorophyll biosynthetic process	5.29E-06
14	GO:0009735: response to cytokinin	1.55E-05
15	GO:0034220: ion transmembrane transport	2.27E-05
16	GO:0080170: hydrogen peroxide transmembrane transport	4.12E-05
17	GO:0010027: thylakoid membrane organization	8.25E-05
18	GO:0006833: water transport	1.24E-04
19	GO:0010025: wax biosynthetic process	1.24E-04
20	GO:0018298: protein-chromophore linkage	1.34E-04
21	GO:0010196: nonphotochemical quenching	2.93E-04
22	GO:0034337: RNA folding	3.42E-04
23	GO:0006835: dicarboxylic acid transport	3.42E-04
24	GO:0071588: hydrogen peroxide mediated signaling pathway	3.42E-04
25	GO:0015936: coenzyme A metabolic process	3.42E-04
26	GO:0070509: calcium ion import	3.42E-04
27	GO:0007263: nitric oxide mediated signal transduction	3.42E-04
28	GO:0043489: RNA stabilization	3.42E-04
29	GO:0000481: maturation of 5S rRNA	3.42E-04
30	GO:0042371: vitamin K biosynthetic process	3.42E-04
31	GO:0008610: lipid biosynthetic process	3.67E-04
32	GO:0009416: response to light stimulus	5.21E-04
33	GO:0006810: transport	6.45E-04
34	GO:0030388: fructose 1,6-bisphosphate metabolic process	7.45E-04
35	GO:0010289: homogalacturonan biosynthetic process	7.45E-04
36	GO:0043255: regulation of carbohydrate biosynthetic process	7.45E-04
37	GO:0010115: regulation of abscisic acid biosynthetic process	7.45E-04
38	GO:0000038: very long-chain fatty acid metabolic process	8.59E-04
39	GO:0055085: transmembrane transport	8.85E-04
40	GO:0016024: CDP-diacylglycerol biosynthetic process	9.79E-04
41	GO:0006094: gluconeogenesis	1.11E-03
42	GO:0006000: fructose metabolic process	1.21E-03
43	GO:0090391: granum assembly	1.21E-03
44	GO:0006518: peptide metabolic process	1.21E-03
45	GO:0010143: cutin biosynthetic process	1.25E-03
46	GO:0009825: multidimensional cell growth	1.39E-03
47	GO:0055114: oxidation-reduction process	1.55E-03
48	GO:0009409: response to cold	1.59E-03
49	GO:0051639: actin filament network formation	1.74E-03
50	GO:1901332: negative regulation of lateral root development	1.74E-03
51	GO:2001141: regulation of RNA biosynthetic process	1.74E-03
52	GO:0007017: microtubule-based process	1.90E-03
53	GO:0006869: lipid transport	1.99E-03
54	GO:0031408: oxylipin biosynthetic process	2.09E-03
55	GO:0016998: cell wall macromolecule catabolic process	2.09E-03
56	GO:0051764: actin crosslink formation	2.33E-03
57	GO:0009765: photosynthesis, light harvesting	2.33E-03
58	GO:0006085: acetyl-CoA biosynthetic process	2.33E-03
59	GO:0006183: GTP biosynthetic process	2.33E-03
60	GO:0045727: positive regulation of translation	2.33E-03
61	GO:0030104: water homeostasis	2.33E-03
62	GO:0015994: chlorophyll metabolic process	2.33E-03
63	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	2.33E-03
64	GO:0006629: lipid metabolic process	2.45E-03
65	GO:0071555: cell wall organization	2.46E-03
66	GO:0009306: protein secretion	2.71E-03
67	GO:0008152: metabolic process	2.91E-03
68	GO:0016120: carotene biosynthetic process	2.98E-03
69	GO:0006564: L-serine biosynthetic process	2.98E-03
70	GO:0006461: protein complex assembly	2.98E-03
71	GO:0006751: glutathione catabolic process	3.68E-03
72	GO:0048827: phyllome development	3.68E-03
73	GO:0042549: photosystem II stabilization	3.68E-03
74	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.68E-03
75	GO:0009913: epidermal cell differentiation	3.68E-03
76	GO:0006655: phosphatidylglycerol biosynthetic process	3.68E-03
77	GO:0010190: cytochrome b6f complex assembly	3.68E-03
78	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	3.68E-03
79	GO:0010337: regulation of salicylic acid metabolic process	3.68E-03
80	GO:0006561: proline biosynthetic process	3.68E-03
81	GO:0009658: chloroplast organization	3.81E-03
82	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	4.43E-03
83	GO:0048280: vesicle fusion with Golgi apparatus	4.43E-03
84	GO:0030488: tRNA methylation	4.43E-03
85	GO:0010019: chloroplast-nucleus signaling pathway	4.43E-03
86	GO:0030497: fatty acid elongation	5.23E-03
87	GO:1900057: positive regulation of leaf senescence	5.23E-03
88	GO:0015693: magnesium ion transport	5.23E-03
89	GO:0030091: protein repair	6.08E-03
90	GO:0006605: protein targeting	6.08E-03
91	GO:0032508: DNA duplex unwinding	6.08E-03
92	GO:0005975: carbohydrate metabolic process	6.09E-03
93	GO:0006002: fructose 6-phosphate metabolic process	6.98E-03
94	GO:0071482: cellular response to light stimulus	6.98E-03
95	GO:0009657: plastid organization	6.98E-03
96	GO:0015995: chlorophyll biosynthetic process	7.19E-03
97	GO:0042744: hydrogen peroxide catabolic process	7.43E-03
98	GO:0009051: pentose-phosphate shunt, oxidative branch	7.91E-03
99	GO:0006098: pentose-phosphate shunt	7.91E-03
100	GO:0030244: cellulose biosynthetic process	7.97E-03
101	GO:0006633: fatty acid biosynthetic process	8.42E-03
102	GO:0010205: photoinhibition	8.89E-03
103	GO:0009638: phototropism	8.89E-03
104	GO:0042761: very long-chain fatty acid biosynthetic process	8.89E-03
105	GO:0009631: cold acclimation	9.22E-03
106	GO:0006896: Golgi to vacuole transport	9.92E-03
107	GO:0006032: chitin catabolic process	9.92E-03
108	GO:0009688: abscisic acid biosynthetic process	9.92E-03
109	GO:0043069: negative regulation of programmed cell death	9.92E-03
110	GO:0048829: root cap development	9.92E-03
111	GO:0016051: carbohydrate biosynthetic process	1.01E-02
112	GO:0009637: response to blue light	1.01E-02
113	GO:0034599: cellular response to oxidative stress	1.06E-02
114	GO:0019684: photosynthesis, light reaction	1.10E-02
115	GO:0009089: lysine biosynthetic process via diaminopimelate	1.10E-02
116	GO:0009073: aromatic amino acid family biosynthetic process	1.10E-02
117	GO:0043085: positive regulation of catalytic activity	1.10E-02
118	GO:1903507: negative regulation of nucleic acid-templated transcription	1.10E-02
119	GO:0006415: translational termination	1.10E-02
120	GO:0006352: DNA-templated transcription, initiation	1.10E-02
121	GO:0009750: response to fructose	1.10E-02
122	GO:0010114: response to red light	1.31E-02
123	GO:0009718: anthocyanin-containing compound biosynthetic process	1.32E-02
124	GO:0005986: sucrose biosynthetic process	1.32E-02
125	GO:0010628: positive regulation of gene expression	1.32E-02
126	GO:0006006: glucose metabolic process	1.32E-02
127	GO:0010229: inflorescence development	1.32E-02
128	GO:0010540: basipetal auxin transport	1.44E-02
129	GO:0019253: reductive pentose-phosphate cycle	1.44E-02
130	GO:0006855: drug transmembrane transport	1.53E-02
131	GO:0010053: root epidermal cell differentiation	1.56E-02
132	GO:0010167: response to nitrate	1.56E-02
133	GO:0005985: sucrose metabolic process	1.56E-02
134	GO:0071732: cellular response to nitric oxide	1.56E-02
135	GO:0006412: translation	1.61E-02
136	GO:0042538: hyperosmotic salinity response	1.64E-02
137	GO:0006636: unsaturated fatty acid biosynthetic process	1.69E-02
138	GO:0009833: plant-type primary cell wall biogenesis	1.69E-02
139	GO:0042254: ribosome biogenesis	1.70E-02
140	GO:0009809: lignin biosynthetic process	1.77E-02
141	GO:0000027: ribosomal large subunit assembly	1.82E-02
142	GO:0051017: actin filament bundle assembly	1.82E-02
143	GO:0008299: isoprenoid biosynthetic process	1.95E-02
144	GO:0009695: jasmonic acid biosynthetic process	1.95E-02
145	GO:0009768: photosynthesis, light harvesting in photosystem I	1.95E-02
146	GO:0003333: amino acid transmembrane transport	2.08E-02
147	GO:0006096: glycolytic process	2.09E-02
148	GO:0009414: response to water deprivation	2.17E-02
149	GO:0030245: cellulose catabolic process	2.22E-02
150	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.22E-02
151	GO:0035428: hexose transmembrane transport	2.22E-02
152	GO:0071369: cellular response to ethylene stimulus	2.37E-02
153	GO:0019722: calcium-mediated signaling	2.51E-02
154	GO:0042147: retrograde transport, endosome to Golgi	2.66E-02
155	GO:0045454: cell redox homeostasis	2.73E-02
156	GO:0042391: regulation of membrane potential	2.81E-02
157	GO:0000413: protein peptidyl-prolyl isomerization	2.81E-02
158	GO:0006662: glycerol ether metabolic process	2.96E-02
159	GO:0010182: sugar mediated signaling pathway	2.96E-02
160	GO:0046323: glucose import	2.96E-02
161	GO:0009651: response to salt stress	3.21E-02
162	GO:0006623: protein targeting to vacuole	3.28E-02
163	GO:0048825: cotyledon development	3.28E-02
164	GO:0008654: phospholipid biosynthetic process	3.28E-02
165	GO:0016042: lipid catabolic process	3.41E-02
166	GO:0000302: response to reactive oxygen species	3.44E-02
167	GO:0006891: intra-Golgi vesicle-mediated transport	3.44E-02
168	GO:0010583: response to cyclopentenone	3.61E-02
169	GO:1901657: glycosyl compound metabolic process	3.78E-02
170	GO:0071281: cellular response to iron ion	3.78E-02
171	GO:0007267: cell-cell signaling	4.12E-02
172	GO:0007623: circadian rhythm	4.34E-02
173	GO:0016126: sterol biosynthetic process	4.47E-02
174	GO:0001666: response to hypoxia	4.47E-02
175	GO:0009911: positive regulation of flower development	4.47E-02
176	GO:0042128: nitrate assimilation	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0015142: tricarboxylic acid transmembrane transporter activity	0.00E+00
2	GO:0005222: intracellular cAMP activated cation channel activity	0.00E+00
3	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
4	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
5	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
6	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
7	GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity	0.00E+00
8	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
9	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
10	GO:0019843: rRNA binding	1.96E-06
11	GO:0043495: protein anchor	7.33E-05
12	GO:0015250: water channel activity	8.25E-05
13	GO:0016168: chlorophyll binding	9.16E-05
14	GO:0016746: transferase activity, transferring acyl groups	1.41E-04
15	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.66E-04
16	GO:0022891: substrate-specific transmembrane transporter activity	2.47E-04
17	GO:0019899: enzyme binding	2.93E-04
18	GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	3.42E-04
19	GO:0004420: hydroxymethylglutaryl-CoA reductase (NADPH) activity	3.42E-04
20	GO:0042282: hydroxymethylglutaryl-CoA reductase activity	3.42E-04
21	GO:0080132: fatty acid alpha-hydroxylase activity	3.42E-04
22	GO:0004321: fatty-acyl-CoA synthase activity	3.42E-04
23	GO:0005221: intracellular cyclic nucleotide activated cation channel activity	3.42E-04
24	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.98E-04
25	GO:0003839: gamma-glutamylcyclotransferase activity	7.45E-04
26	GO:0004617: phosphoglycerate dehydrogenase activity	7.45E-04
27	GO:0003938: IMP dehydrogenase activity	7.45E-04
28	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	7.45E-04
29	GO:0008805: carbon-monoxide oxygenase activity	7.45E-04
30	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	7.45E-04
31	GO:0047746: chlorophyllase activity	7.45E-04
32	GO:0004565: beta-galactosidase activity	1.11E-03
33	GO:0008081: phosphoric diester hydrolase activity	1.11E-03
34	GO:0004022: alcohol dehydrogenase (NAD) activity	1.11E-03
35	GO:0005310: dicarboxylic acid transmembrane transporter activity	1.21E-03
36	GO:0008266: poly(U) RNA binding	1.25E-03
37	GO:0052689: carboxylic ester hydrolase activity	1.47E-03
38	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.55E-03
39	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.55E-03
40	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.55E-03
41	GO:0005528: FK506 binding	1.72E-03
42	GO:0017077: oxidative phosphorylation uncoupler activity	1.74E-03
43	GO:0001872: (1->3)-beta-D-glucan binding	1.74E-03
44	GO:0003878: ATP citrate synthase activity	1.74E-03
45	GO:0016149: translation release factor activity, codon specific	1.74E-03
46	GO:0016851: magnesium chelatase activity	1.74E-03
47	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.74E-03
48	GO:0043023: ribosomal large subunit binding	1.74E-03
49	GO:0004871: signal transducer activity	1.84E-03
50	GO:0001053: plastid sigma factor activity	2.33E-03
51	GO:0004345: glucose-6-phosphate dehydrogenase activity	2.33E-03
52	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	2.33E-03
53	GO:0004045: aminoacyl-tRNA hydrolase activity	2.33E-03
54	GO:0016987: sigma factor activity	2.33E-03
55	GO:0010328: auxin influx transmembrane transporter activity	2.33E-03
56	GO:0052793: pectin acetylesterase activity	2.33E-03
57	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	2.33E-03
58	GO:0042802: identical protein binding	2.82E-03
59	GO:0009922: fatty acid elongase activity	2.98E-03
60	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.98E-03
61	GO:0004332: fructose-bisphosphate aldolase activity	3.68E-03
62	GO:0004130: cytochrome-c peroxidase activity	3.68E-03
63	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.68E-03
64	GO:0016688: L-ascorbate peroxidase activity	3.68E-03
65	GO:0016788: hydrolase activity, acting on ester bonds	3.92E-03
66	GO:0008289: lipid binding	4.38E-03
67	GO:0051920: peroxiredoxin activity	4.43E-03
68	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	4.43E-03
69	GO:0005261: cation channel activity	4.43E-03
70	GO:0005242: inward rectifier potassium channel activity	4.43E-03
71	GO:0016491: oxidoreductase activity	4.48E-03
72	GO:0016791: phosphatase activity	5.11E-03
73	GO:0004620: phospholipase activity	5.23E-03
74	GO:0005200: structural constituent of cytoskeleton	5.43E-03
75	GO:0016209: antioxidant activity	6.08E-03
76	GO:0052747: sinapyl alcohol dehydrogenase activity	6.08E-03
77	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	6.98E-03
78	GO:0030247: polysaccharide binding	7.19E-03
79	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	7.91E-03
80	GO:0016207: 4-coumarate-CoA ligase activity	7.91E-03
81	GO:0003747: translation release factor activity	7.91E-03
82	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	7.97E-03
83	GO:0005215: transporter activity	9.26E-03
84	GO:0004568: chitinase activity	9.92E-03
85	GO:0008047: enzyme activator activity	9.92E-03
86	GO:0015020: glucuronosyltransferase activity	9.92E-03
87	GO:0003735: structural constituent of ribosome	1.09E-02
88	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.09E-02
89	GO:0047372: acylglycerol lipase activity	1.10E-02
90	GO:0050661: NADP binding	1.15E-02
91	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.21E-02
92	GO:0016787: hydrolase activity	1.27E-02
93	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.29E-02
94	GO:0005262: calcium channel activity	1.32E-02
95	GO:0015095: magnesium ion transmembrane transporter activity	1.32E-02
96	GO:0015293: symporter activity	1.47E-02
97	GO:0030552: cAMP binding	1.56E-02
98	GO:0030553: cGMP binding	1.56E-02
99	GO:0004601: peroxidase activity	1.66E-02
100	GO:0031409: pigment binding	1.69E-02
101	GO:0003714: transcription corepressor activity	1.82E-02
102	GO:0051536: iron-sulfur cluster binding	1.82E-02
103	GO:0005216: ion channel activity	1.95E-02
104	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.22E-02
105	GO:0016760: cellulose synthase (UDP-forming) activity	2.37E-02
106	GO:0008810: cellulase activity	2.37E-02
107	GO:0008514: organic anion transmembrane transporter activity	2.51E-02
108	GO:0047134: protein-disulfide reductase activity	2.66E-02
109	GO:0030551: cyclic nucleotide binding	2.81E-02
110	GO:0004791: thioredoxin-disulfide reductase activity	3.12E-02
111	GO:0005355: glucose transmembrane transporter activity	3.12E-02
112	GO:0050662: coenzyme binding	3.12E-02
113	GO:0016829: lyase activity	3.41E-02
114	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.44E-02
115	GO:0000156: phosphorelay response regulator activity	3.78E-02
116	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.78E-02
117	GO:0051015: actin filament binding	3.78E-02
118	GO:0016759: cellulose synthase activity	3.95E-02
119	GO:0016597: amino acid binding	4.30E-02
120	GO:0003729: mRNA binding	4.37E-02
121	GO:0008375: acetylglucosaminyltransferase activity	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	8.99E-27
2	GO:0009570: chloroplast stroma	5.49E-14
3	GO:0009941: chloroplast envelope	7.69E-14
4	GO:0009535: chloroplast thylakoid membrane	2.24E-13
5	GO:0009543: chloroplast thylakoid lumen	1.13E-11
6	GO:0009579: thylakoid	6.85E-11
7	GO:0031977: thylakoid lumen	2.27E-09
8	GO:0009534: chloroplast thylakoid	9.49E-09
9	GO:0016020: membrane	4.76E-06
10	GO:0016021: integral component of membrane	1.38E-05
11	GO:0009523: photosystem II	3.54E-05
12	GO:0046658: anchored component of plasma membrane	1.15E-04
13	GO:0005886: plasma membrane	1.17E-04
14	GO:0048046: apoplast	1.23E-04
15	GO:0009654: photosystem II oxygen evolving complex	1.68E-04
16	GO:0042651: thylakoid membrane	1.68E-04
17	GO:0009533: chloroplast stromal thylakoid	2.93E-04
18	GO:0043674: columella	3.42E-04
19	GO:0009515: granal stacked thylakoid	3.42E-04
20	GO:0009505: plant-type cell wall	4.22E-04
21	GO:0019898: extrinsic component of membrane	4.57E-04
22	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	5.41E-04
23	GO:0010007: magnesium chelatase complex	1.21E-03
24	GO:0031969: chloroplast membrane	1.23E-03
25	GO:0030095: chloroplast photosystem II	1.25E-03
26	GO:0015630: microtubule cytoskeleton	1.74E-03
27	GO:0032432: actin filament bundle	1.74E-03
28	GO:0009346: citrate lyase complex	1.74E-03
29	GO:0005887: integral component of plasma membrane	4.19E-03
30	GO:0031225: anchored component of membrane	4.57E-03
31	GO:0042807: central vacuole	5.23E-03
32	GO:0010287: plastoglobule	5.88E-03
33	GO:0012507: ER to Golgi transport vesicle membrane	6.08E-03
34	GO:0030529: intracellular ribonucleoprotein complex	6.10E-03
35	GO:0008180: COP9 signalosome	7.91E-03
36	GO:0045298: tubulin complex	7.91E-03
37	GO:0005840: ribosome	8.35E-03
38	GO:0005884: actin filament	1.10E-02
39	GO:0009536: plastid	1.13E-02
40	GO:0032040: small-subunit processome	1.21E-02
41	GO:0000312: plastid small ribosomal subunit	1.44E-02
42	GO:0030076: light-harvesting complex	1.56E-02
43	GO:0009506: plasmodesma	1.96E-02
44	GO:0005618: cell wall	1.96E-02
45	GO:0005770: late endosome	2.96E-02
46	GO:0009522: photosystem I	3.12E-02
47	GO:0005783: endoplasmic reticulum	3.24E-02
48	GO:0010319: stromule	4.12E-02
49	GO:0005789: endoplasmic reticulum membrane	4.56E-02