Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G01340

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072722: response to amitrole0.00E+00
2GO:0072660: maintenance of protein location in plasma membrane0.00E+00
3GO:0071327: cellular response to trehalose stimulus0.00E+00
4GO:0051245: negative regulation of cellular defense response0.00E+00
5GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
6GO:0015690: aluminum cation transport0.00E+00
7GO:0070212: protein poly-ADP-ribosylation0.00E+00
8GO:0045792: negative regulation of cell size0.00E+00
9GO:0042430: indole-containing compound metabolic process0.00E+00
10GO:1900367: positive regulation of defense response to insect0.00E+00
11GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)0.00E+00
12GO:0009617: response to bacterium5.34E-12
13GO:0042742: defense response to bacterium1.45E-09
14GO:0006952: defense response3.27E-09
15GO:0006468: protein phosphorylation5.30E-08
16GO:0009816: defense response to bacterium, incompatible interaction1.62E-07
17GO:0009627: systemic acquired resistance1.94E-07
18GO:0009626: plant-type hypersensitive response4.44E-07
19GO:0080142: regulation of salicylic acid biosynthetic process5.24E-07
20GO:0043069: negative regulation of programmed cell death6.63E-07
21GO:0006979: response to oxidative stress1.00E-06
22GO:0009751: response to salicylic acid1.58E-06
23GO:0010200: response to chitin4.31E-06
24GO:0031349: positive regulation of defense response4.77E-06
25GO:0080151: positive regulation of salicylic acid mediated signaling pathway4.77E-06
26GO:0009863: salicylic acid mediated signaling pathway5.07E-06
27GO:0048281: inflorescence morphogenesis1.69E-05
28GO:0010112: regulation of systemic acquired resistance1.91E-05
29GO:1900426: positive regulation of defense response to bacterium2.56E-05
30GO:0051707: response to other organism2.60E-05
31GO:0019438: aromatic compound biosynthetic process3.75E-05
32GO:0006612: protein targeting to membrane3.75E-05
33GO:0010150: leaf senescence4.72E-05
34GO:0010363: regulation of plant-type hypersensitive response6.70E-05
35GO:0002237: response to molecule of bacterial origin7.88E-05
36GO:0070588: calcium ion transmembrane transport9.40E-05
37GO:0009697: salicylic acid biosynthetic process1.05E-04
38GO:0000162: tryptophan biosynthetic process1.11E-04
39GO:0009117: nucleotide metabolic process1.52E-04
40GO:0010942: positive regulation of cell death1.52E-04
41GO:0031348: negative regulation of defense response1.96E-04
42GO:0009625: response to insect2.22E-04
43GO:0050691: regulation of defense response to virus by host3.24E-04
44GO:0010230: alternative respiration3.24E-04
45GO:0060862: negative regulation of floral organ abscission3.24E-04
46GO:0046244: salicylic acid catabolic process3.24E-04
47GO:0019276: UDP-N-acetylgalactosamine metabolic process3.24E-04
48GO:0006047: UDP-N-acetylglucosamine metabolic process3.24E-04
49GO:0009609: response to symbiotic bacterium3.24E-04
50GO:0055081: anion homeostasis3.24E-04
51GO:1901183: positive regulation of camalexin biosynthetic process3.24E-04
52GO:0009700: indole phytoalexin biosynthetic process3.24E-04
53GO:0030162: regulation of proteolysis3.40E-04
54GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.40E-04
55GO:0006886: intracellular protein transport3.58E-04
56GO:2000031: regulation of salicylic acid mediated signaling pathway4.17E-04
57GO:0010120: camalexin biosynthetic process4.17E-04
58GO:0006891: intra-Golgi vesicle-mediated transport4.51E-04
59GO:0000302: response to reactive oxygen species4.51E-04
60GO:2000072: regulation of defense response to fungus, incompatible interaction7.07E-04
61GO:0080185: effector dependent induction by symbiont of host immune response7.07E-04
62GO:0010618: aerenchyma formation7.07E-04
63GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)7.07E-04
64GO:0048229: gametophyte development7.96E-04
65GO:1900140: regulation of seedling development1.15E-03
66GO:0010581: regulation of starch biosynthetic process1.15E-03
67GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.15E-03
68GO:0002230: positive regulation of defense response to virus by host1.15E-03
69GO:0055074: calcium ion homeostasis1.15E-03
70GO:0072661: protein targeting to plasma membrane1.15E-03
71GO:0006011: UDP-glucose metabolic process1.15E-03
72GO:0010272: response to silver ion1.15E-03
73GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.15E-03
74GO:0042343: indole glucosinolate metabolic process1.29E-03
75GO:0009409: response to cold1.31E-03
76GO:0009867: jasmonic acid mediated signaling pathway1.35E-03
77GO:0009737: response to abscisic acid1.37E-03
78GO:0034976: response to endoplasmic reticulum stress1.44E-03
79GO:0080147: root hair cell development1.59E-03
80GO:0048530: fruit morphogenesis1.65E-03
81GO:0010148: transpiration1.65E-03
82GO:1902290: positive regulation of defense response to oomycetes1.65E-03
83GO:0000187: activation of MAPK activity1.65E-03
84GO:0048194: Golgi vesicle budding1.65E-03
85GO:0002239: response to oomycetes1.65E-03
86GO:0043207: response to external biotic stimulus1.65E-03
87GO:0015696: ammonium transport1.65E-03
88GO:0048278: vesicle docking1.93E-03
89GO:0071456: cellular response to hypoxia2.11E-03
90GO:0009814: defense response, incompatible interaction2.11E-03
91GO:2000022: regulation of jasmonic acid mediated signaling pathway2.11E-03
92GO:1901141: regulation of lignin biosynthetic process2.21E-03
93GO:0080037: negative regulation of cytokinin-activated signaling pathway2.21E-03
94GO:0060548: negative regulation of cell death2.21E-03
95GO:0048638: regulation of developmental growth2.21E-03
96GO:0045088: regulation of innate immune response2.21E-03
97GO:0072488: ammonium transmembrane transport2.21E-03
98GO:0000460: maturation of 5.8S rRNA2.21E-03
99GO:0006536: glutamate metabolic process2.21E-03
100GO:0071219: cellular response to molecule of bacterial origin2.21E-03
101GO:0006621: protein retention in ER lumen2.21E-03
102GO:0031347: regulation of defense response2.38E-03
103GO:0006457: protein folding2.70E-03
104GO:0046283: anthocyanin-containing compound metabolic process2.82E-03
105GO:0010225: response to UV-C2.82E-03
106GO:2000762: regulation of phenylpropanoid metabolic process2.82E-03
107GO:0030041: actin filament polymerization2.82E-03
108GO:0010224: response to UV-B2.85E-03
109GO:0050832: defense response to fungus3.23E-03
110GO:0061025: membrane fusion3.39E-03
111GO:0009646: response to absence of light3.39E-03
112GO:0000470: maturation of LSU-rRNA3.49E-03
113GO:0060918: auxin transport3.49E-03
114GO:0003006: developmental process involved in reproduction3.49E-03
115GO:0007165: signal transduction3.67E-03
116GO:0009620: response to fungus3.81E-03
117GO:0002229: defense response to oomycetes3.89E-03
118GO:0010193: response to ozone3.89E-03
119GO:0009094: L-phenylalanine biosynthetic process4.20E-03
120GO:0010199: organ boundary specification between lateral organs and the meristem4.20E-03
121GO:0010555: response to mannitol4.20E-03
122GO:0010310: regulation of hydrogen peroxide metabolic process4.20E-03
123GO:2000067: regulation of root morphogenesis4.20E-03
124GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.20E-03
125GO:0009624: response to nematode4.28E-03
126GO:0080167: response to karrikin4.69E-03
127GO:0050829: defense response to Gram-negative bacterium4.95E-03
128GO:0009610: response to symbiotic fungus4.95E-03
129GO:0071446: cellular response to salicylic acid stimulus4.95E-03
130GO:1900057: positive regulation of leaf senescence4.95E-03
131GO:0009615: response to virus5.63E-03
132GO:0043068: positive regulation of programmed cell death5.76E-03
133GO:0006605: protein targeting5.76E-03
134GO:0031540: regulation of anthocyanin biosynthetic process5.76E-03
135GO:0006102: isocitrate metabolic process5.76E-03
136GO:0030091: protein repair5.76E-03
137GO:0009787: regulation of abscisic acid-activated signaling pathway5.76E-03
138GO:0006906: vesicle fusion6.29E-03
139GO:0010497: plasmodesmata-mediated intercellular transport6.60E-03
140GO:0010204: defense response signaling pathway, resistance gene-independent6.60E-03
141GO:0043562: cellular response to nitrogen levels6.60E-03
142GO:0009699: phenylpropanoid biosynthetic process6.60E-03
143GO:0007186: G-protein coupled receptor signaling pathway6.60E-03
144GO:0008219: cell death7.35E-03
145GO:0032259: methylation7.94E-03
146GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.41E-03
147GO:0010205: photoinhibition8.41E-03
148GO:2000280: regulation of root development8.41E-03
149GO:0048268: clathrin coat assembly8.41E-03
150GO:0007568: aging8.51E-03
151GO:0010119: regulation of stomatal movement8.51E-03
152GO:0045087: innate immune response9.33E-03
153GO:0009870: defense response signaling pathway, resistance gene-dependent9.37E-03
154GO:0006032: chitin catabolic process9.37E-03
155GO:0006099: tricarboxylic acid cycle9.76E-03
156GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process9.91E-03
157GO:0000272: polysaccharide catabolic process1.04E-02
158GO:0009750: response to fructose1.04E-02
159GO:0009682: induced systemic resistance1.04E-02
160GO:0006887: exocytosis1.11E-02
161GO:0010105: negative regulation of ethylene-activated signaling pathway1.14E-02
162GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.14E-02
163GO:0071365: cellular response to auxin stimulus1.14E-02
164GO:0012501: programmed cell death1.14E-02
165GO:0015706: nitrate transport1.14E-02
166GO:0002213: defense response to insect1.14E-02
167GO:0042542: response to hydrogen peroxide1.16E-02
168GO:0010075: regulation of meristem growth1.25E-02
169GO:0009887: animal organ morphogenesis1.36E-02
170GO:0009934: regulation of meristem structural organization1.36E-02
171GO:0006541: glutamine metabolic process1.36E-02
172GO:0009636: response to toxic substance1.36E-02
173GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.46E-02
174GO:0010039: response to iron ion1.48E-02
175GO:0010167: response to nitrate1.48E-02
176GO:0003333: amino acid transmembrane transport1.97E-02
177GO:0016998: cell wall macromolecule catabolic process1.97E-02
178GO:0098542: defense response to other organism1.97E-02
179GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.05E-02
180GO:0009611: response to wounding2.08E-02
181GO:0030433: ubiquitin-dependent ERAD pathway2.10E-02
182GO:0016192: vesicle-mediated transport2.10E-02
183GO:0019748: secondary metabolic process2.10E-02
184GO:0009411: response to UV2.23E-02
185GO:0006508: proteolysis2.28E-02
186GO:0009306: protein secretion2.37E-02
187GO:0045454: cell redox homeostasis2.47E-02
188GO:0070417: cellular response to cold2.51E-02
189GO:0042147: retrograde transport, endosome to Golgi2.51E-02
190GO:0000413: protein peptidyl-prolyl isomerization2.65E-02
191GO:0010051: xylem and phloem pattern formation2.65E-02
192GO:0042631: cellular response to water deprivation2.65E-02
193GO:0009651: response to salt stress2.73E-02
194GO:0010197: polar nucleus fusion2.80E-02
195GO:0055114: oxidation-reduction process2.82E-02
196GO:0055085: transmembrane transport2.86E-02
197GO:0048544: recognition of pollen2.95E-02
198GO:0015031: protein transport2.96E-02
199GO:0055072: iron ion homeostasis3.10E-02
200GO:0006623: protein targeting to vacuole3.10E-02
201GO:0009749: response to glucose3.10E-02
202GO:0006629: lipid metabolic process3.20E-02
203GO:0051607: defense response to virus4.06E-02
204GO:0046686: response to cadmium ion4.13E-02
205GO:0001666: response to hypoxia4.23E-02
206GO:0007166: cell surface receptor signaling pathway4.57E-02
207GO:0042128: nitrate assimilation4.57E-02
208GO:0010468: regulation of gene expression4.77E-02
RankGO TermAdjusted P value
1GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
2GO:0005046: KDEL sequence binding0.00E+00
3GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
4GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
5GO:0051670: inulinase activity0.00E+00
6GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
7GO:0005524: ATP binding2.50E-08
8GO:0004674: protein serine/threonine kinase activity4.51E-08
9GO:0004385: guanylate kinase activity4.77E-06
10GO:0016301: kinase activity5.47E-06
11GO:0005516: calmodulin binding1.19E-05
12GO:0005388: calcium-transporting ATPase activity6.51E-05
13GO:0047631: ADP-ribose diphosphatase activity1.05E-04
14GO:0000210: NAD+ diphosphatase activity1.52E-04
15GO:0004656: procollagen-proline 4-dioxygenase activity2.07E-04
16GO:0031219: levanase activity3.24E-04
17GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity3.24E-04
18GO:0090353: polygalacturonase inhibitor activity3.24E-04
19GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity3.24E-04
20GO:0004425: indole-3-glycerol-phosphate synthase activity3.24E-04
21GO:1901149: salicylic acid binding3.24E-04
22GO:0080042: ADP-glucose pyrophosphohydrolase activity3.24E-04
23GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity3.24E-04
24GO:0051669: fructan beta-fructosidase activity3.24E-04
25GO:0004048: anthranilate phosphoribosyltransferase activity3.24E-04
26GO:0004714: transmembrane receptor protein tyrosine kinase activity3.40E-04
27GO:0008171: O-methyltransferase activity6.91E-04
28GO:0004775: succinate-CoA ligase (ADP-forming) activity7.07E-04
29GO:0004338: glucan exo-1,3-beta-glucosidase activity7.07E-04
30GO:0051980: iron-nicotianamine transmembrane transporter activity7.07E-04
31GO:0050736: O-malonyltransferase activity7.07E-04
32GO:0004776: succinate-CoA ligase (GDP-forming) activity7.07E-04
33GO:0004566: beta-glucuronidase activity7.07E-04
34GO:0080041: ADP-ribose pyrophosphohydrolase activity7.07E-04
35GO:0043021: ribonucleoprotein complex binding7.07E-04
36GO:0017110: nucleoside-diphosphatase activity7.07E-04
37GO:0051082: unfolded protein binding7.59E-04
38GO:0008559: xenobiotic-transporting ATPase activity7.96E-04
39GO:0004148: dihydrolipoyl dehydrogenase activity1.15E-03
40GO:0031683: G-protein beta/gamma-subunit complex binding1.15E-03
41GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity1.15E-03
42GO:0004049: anthranilate synthase activity1.15E-03
43GO:0001664: G-protein coupled receptor binding1.15E-03
44GO:0004190: aspartic-type endopeptidase activity1.29E-03
45GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.35E-03
46GO:0004672: protein kinase activity1.59E-03
47GO:0004449: isocitrate dehydrogenase (NAD+) activity1.65E-03
48GO:0004351: glutamate decarboxylase activity1.65E-03
49GO:0035529: NADH pyrophosphatase activity1.65E-03
50GO:0004707: MAP kinase activity1.93E-03
51GO:0043495: protein anchor2.21E-03
52GO:0047769: arogenate dehydratase activity2.21E-03
53GO:0004664: prephenate dehydratase activity2.21E-03
54GO:0046923: ER retention sequence binding2.21E-03
55GO:0051287: NAD binding2.38E-03
56GO:0031625: ubiquitin protein ligase binding3.10E-03
57GO:0008519: ammonium transmembrane transporter activity3.49E-03
58GO:0004029: aldehyde dehydrogenase (NAD) activity3.49E-03
59GO:0004012: phospholipid-translocating ATPase activity4.20E-03
60GO:0033743: peptide-methionine (R)-S-oxide reductase activity4.20E-03
61GO:0008320: protein transmembrane transporter activity4.95E-03
62GO:0005509: calcium ion binding5.56E-03
63GO:0004708: MAP kinase kinase activity5.76E-03
64GO:0004564: beta-fructofuranosidase activity5.76E-03
65GO:0005515: protein binding6.10E-03
66GO:0030247: polysaccharide binding6.63E-03
67GO:0004683: calmodulin-dependent protein kinase activity6.63E-03
68GO:0004806: triglyceride lipase activity6.63E-03
69GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen6.93E-03
70GO:0008757: S-adenosylmethionine-dependent methyltransferase activity6.99E-03
71GO:0015112: nitrate transmembrane transporter activity8.41E-03
72GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity8.41E-03
73GO:0004575: sucrose alpha-glucosidase activity8.41E-03
74GO:0004713: protein tyrosine kinase activity9.37E-03
75GO:0004568: chitinase activity9.37E-03
76GO:0005545: 1-phosphatidylinositol binding9.37E-03
77GO:0000149: SNARE binding1.02E-02
78GO:0005507: copper ion binding1.08E-02
79GO:0015198: oligopeptide transporter activity1.14E-02
80GO:0005484: SNAP receptor activity1.21E-02
81GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.25E-02
82GO:0005262: calcium channel activity1.25E-02
83GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.36E-02
84GO:0008083: growth factor activity1.36E-02
85GO:0008168: methyltransferase activity1.43E-02
86GO:0004867: serine-type endopeptidase inhibitor activity1.48E-02
87GO:0008061: chitin binding1.48E-02
88GO:0043531: ADP binding1.68E-02
89GO:0016298: lipase activity1.69E-02
90GO:0031418: L-ascorbic acid binding1.72E-02
91GO:0005506: iron ion binding1.92E-02
92GO:0033612: receptor serine/threonine kinase binding1.97E-02
93GO:0016779: nucleotidyltransferase activity2.10E-02
94GO:0008810: cellulase activity2.23E-02
95GO:0003756: protein disulfide isomerase activity2.37E-02
96GO:0004871: signal transducer activity2.62E-02
97GO:0004527: exonuclease activity2.80E-02
98GO:0030276: clathrin binding2.80E-02
99GO:0008080: N-acetyltransferase activity2.80E-02
100GO:0004872: receptor activity3.10E-02
101GO:0030246: carbohydrate binding3.12E-02
102GO:0019825: oxygen binding3.39E-02
103GO:0004197: cysteine-type endopeptidase activity3.41E-02
104GO:0008565: protein transporter activity3.48E-02
105GO:0009055: electron carrier activity3.49E-02
106GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.74E-02
107GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.89E-02
108GO:0016597: amino acid binding4.06E-02
109GO:0020037: heme binding4.22E-02
110GO:0051213: dioxygenase activity4.23E-02
111GO:0009931: calcium-dependent protein serine/threonine kinase activity4.57E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.40E-10
2GO:0005783: endoplasmic reticulum1.22E-07
3GO:0016021: integral component of membrane1.69E-06
4GO:0005788: endoplasmic reticulum lumen7.92E-05
5GO:0005801: cis-Golgi network2.07E-04
6GO:0005911: cell-cell junction3.24E-04
7GO:0030134: ER to Golgi transport vesicle7.07E-04
8GO:0005901: caveola7.07E-04
9GO:0070545: PeBoW complex7.07E-04
10GO:0005765: lysosomal membrane7.96E-04
11GO:0019005: SCF ubiquitin ligase complex1.01E-03
12GO:0031012: extracellular matrix1.03E-03
13GO:0005795: Golgi stack1.29E-03
14GO:0005789: endoplasmic reticulum membrane1.75E-03
15GO:0048046: apoplast2.10E-03
16GO:0030660: Golgi-associated vesicle membrane2.21E-03
17GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.21E-03
18GO:0005829: cytosol2.82E-03
19GO:0000164: protein phosphatase type 1 complex2.82E-03
20GO:0009506: plasmodesma3.52E-03
21GO:0005834: heterotrimeric G-protein complex3.66E-03
22GO:0031225: anchored component of membrane3.90E-03
23GO:0005774: vacuolar membrane4.77E-03
24GO:0030687: preribosome, large subunit precursor4.95E-03
25GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane5.76E-03
26GO:0031090: organelle membrane7.48E-03
27GO:0030665: clathrin-coated vesicle membrane8.41E-03
28GO:0000325: plant-type vacuole8.51E-03
29GO:0005740: mitochondrial envelope9.37E-03
30GO:0017119: Golgi transport complex9.37E-03
31GO:0005794: Golgi apparatus9.60E-03
32GO:0009505: plant-type cell wall1.01E-02
33GO:0031201: SNARE complex1.11E-02
34GO:0046658: anchored component of plasma membrane1.23E-02
35GO:0005887: integral component of plasma membrane1.35E-02
36GO:0005741: mitochondrial outer membrane1.97E-02
37GO:0005905: clathrin-coated pit1.97E-02
38GO:0005576: extracellular region2.31E-02
39GO:0030136: clathrin-coated vesicle2.51E-02
40GO:0005623: cell2.99E-02
41GO:0009504: cell plate3.10E-02
42GO:0043231: intracellular membrane-bounded organelle3.61E-02
43GO:0005618: cell wall3.82E-02
44GO:0005622: intracellular4.66E-02
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Gene type



Gene DE type