Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G01120

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006223: uracil salvage0.00E+00
2GO:0016553: base conversion or substitution editing0.00E+00
3GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
4GO:0033494: ferulate metabolic process0.00E+00
5GO:0015805: S-adenosyl-L-methionine transport0.00E+00
6GO:0010394: homogalacturonan metabolic process0.00E+00
7GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
8GO:0097164: ammonium ion metabolic process0.00E+00
9GO:0042493: response to drug0.00E+00
10GO:0006633: fatty acid biosynthetic process4.50E-07
11GO:0032544: plastid translation1.88E-05
12GO:0009658: chloroplast organization3.21E-05
13GO:0010583: response to cyclopentenone5.67E-05
14GO:0015976: carbon utilization8.29E-05
15GO:0006546: glycine catabolic process8.29E-05
16GO:0010190: cytochrome b6f complex assembly1.86E-04
17GO:0009826: unidimensional cell growth1.96E-04
18GO:0071555: cell wall organization3.06E-04
19GO:0055114: oxidation-reduction process3.19E-04
20GO:1902458: positive regulation of stomatal opening3.67E-04
21GO:0071588: hydrogen peroxide mediated signaling pathway3.67E-04
22GO:0060627: regulation of vesicle-mediated transport3.67E-04
23GO:0043489: RNA stabilization3.67E-04
24GO:1904966: positive regulation of vitamin E biosynthetic process3.67E-04
25GO:0010442: guard cell morphogenesis3.67E-04
26GO:0071370: cellular response to gibberellin stimulus3.67E-04
27GO:0042547: cell wall modification involved in multidimensional cell growth3.67E-04
28GO:1904964: positive regulation of phytol biosynthetic process3.67E-04
29GO:0042371: vitamin K biosynthetic process3.67E-04
30GO:0045488: pectin metabolic process3.67E-04
31GO:0042335: cuticle development3.94E-04
32GO:0007155: cell adhesion4.09E-04
33GO:0042255: ribosome assembly4.09E-04
34GO:0015979: photosynthesis4.50E-04
35GO:0042538: hyperosmotic salinity response5.28E-04
36GO:0000902: cell morphogenesis6.01E-04
37GO:0032502: developmental process6.22E-04
38GO:0009416: response to light stimulus6.66E-04
39GO:0006529: asparagine biosynthetic process8.00E-04
40GO:1903426: regulation of reactive oxygen species biosynthetic process8.00E-04
41GO:0052541: plant-type cell wall cellulose metabolic process8.00E-04
42GO:0070981: L-asparagine biosynthetic process8.00E-04
43GO:1902326: positive regulation of chlorophyll biosynthetic process8.00E-04
44GO:0060919: auxin influx8.00E-04
45GO:0071258: cellular response to gravity8.00E-04
46GO:0048829: root cap development8.26E-04
47GO:0010027: thylakoid membrane organization9.11E-04
48GO:0043085: positive regulation of catalytic activity9.51E-04
49GO:0010411: xyloglucan metabolic process1.12E-03
50GO:0030036: actin cytoskeleton organization1.23E-03
51GO:2001295: malonyl-CoA biosynthetic process1.29E-03
52GO:0006065: UDP-glucuronate biosynthetic process1.29E-03
53GO:0010581: regulation of starch biosynthetic process1.29E-03
54GO:0006833: water transport1.73E-03
55GO:0051639: actin filament network formation1.87E-03
56GO:0009650: UV protection1.87E-03
57GO:0006424: glutamyl-tRNA aminoacylation1.87E-03
58GO:0051016: barbed-end actin filament capping1.87E-03
59GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis1.87E-03
60GO:0009735: response to cytokinin1.97E-03
61GO:0009409: response to cold2.07E-03
62GO:0007017: microtubule-based process2.11E-03
63GO:0003333: amino acid transmembrane transport2.32E-03
64GO:0042546: cell wall biogenesis2.49E-03
65GO:0051764: actin crosslink formation2.51E-03
66GO:0019464: glycine decarboxylation via glycine cleavage system2.51E-03
67GO:0009765: photosynthesis, light harvesting2.51E-03
68GO:2000122: negative regulation of stomatal complex development2.51E-03
69GO:0006183: GTP biosynthetic process2.51E-03
70GO:0044206: UMP salvage2.51E-03
71GO:0010037: response to carbon dioxide2.51E-03
72GO:0006461: protein complex assembly3.21E-03
73GO:0016123: xanthophyll biosynthetic process3.21E-03
74GO:0032543: mitochondrial translation3.21E-03
75GO:0016120: carotene biosynthetic process3.21E-03
76GO:0006564: L-serine biosynthetic process3.21E-03
77GO:0045038: protein import into chloroplast thylakoid membrane3.21E-03
78GO:0043097: pyrimidine nucleoside salvage3.21E-03
79GO:0016117: carotenoid biosynthetic process3.26E-03
80GO:0034220: ion transmembrane transport3.53E-03
81GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.96E-03
82GO:0006086: acetyl-CoA biosynthetic process from pyruvate3.96E-03
83GO:0006206: pyrimidine nucleobase metabolic process3.96E-03
84GO:0016132: brassinosteroid biosynthetic process4.70E-03
85GO:0009955: adaxial/abaxial pattern specification4.78E-03
86GO:0042372: phylloquinone biosynthetic process4.78E-03
87GO:0009612: response to mechanical stimulus4.78E-03
88GO:0006694: steroid biosynthetic process4.78E-03
89GO:1901259: chloroplast rRNA processing4.78E-03
90GO:0030488: tRNA methylation4.78E-03
91GO:0009854: oxidative photosynthetic carbon pathway4.78E-03
92GO:0010019: chloroplast-nucleus signaling pathway4.78E-03
93GO:0006401: RNA catabolic process5.64E-03
94GO:0009610: response to symbiotic fungus5.64E-03
95GO:0051693: actin filament capping5.64E-03
96GO:0009645: response to low light intensity stimulus5.64E-03
97GO:0006400: tRNA modification5.64E-03
98GO:0006353: DNA-templated transcription, termination6.56E-03
99GO:2000070: regulation of response to water deprivation6.56E-03
100GO:0045010: actin nucleation6.56E-03
101GO:0016126: sterol biosynthetic process6.80E-03
102GO:0009808: lignin metabolic process7.52E-03
103GO:0009932: cell tip growth7.52E-03
104GO:0015996: chlorophyll catabolic process7.52E-03
105GO:0019430: removal of superoxide radicals7.52E-03
106GO:0007186: G-protein coupled receptor signaling pathway7.52E-03
107GO:0009657: plastid organization7.52E-03
108GO:0006526: arginine biosynthetic process7.52E-03
109GO:0046686: response to cadmium ion8.15E-03
110GO:0042744: hydrogen peroxide catabolic process8.54E-03
111GO:0009051: pentose-phosphate shunt, oxidative branch8.54E-03
112GO:0010206: photosystem II repair8.54E-03
113GO:0010380: regulation of chlorophyll biosynthetic process9.60E-03
114GO:0009631: cold acclimation1.03E-02
115GO:0006949: syncytium formation1.07E-02
116GO:0009870: defense response signaling pathway, resistance gene-dependent1.07E-02
117GO:0043069: negative regulation of programmed cell death1.07E-02
118GO:0006865: amino acid transport1.08E-02
119GO:0034599: cellular response to oxidative stress1.18E-02
120GO:0000038: very long-chain fatty acid metabolic process1.19E-02
121GO:0019684: photosynthesis, light reaction1.19E-02
122GO:0009089: lysine biosynthetic process via diaminopimelate1.19E-02
123GO:0009073: aromatic amino acid family biosynthetic process1.19E-02
124GO:0009773: photosynthetic electron transport in photosystem I1.19E-02
125GO:0006415: translational termination1.19E-02
126GO:0055085: transmembrane transport1.23E-02
127GO:0006839: mitochondrial transport1.29E-02
128GO:0045037: protein import into chloroplast stroma1.31E-02
129GO:0006631: fatty acid metabolic process1.34E-02
130GO:0009725: response to hormone1.43E-02
131GO:0006006: glucose metabolic process1.43E-02
132GO:0010207: photosystem II assembly1.56E-02
133GO:0010143: cutin biosynthetic process1.56E-02
134GO:0006541: glutamine metabolic process1.56E-02
135GO:0010020: chloroplast fission1.56E-02
136GO:0007015: actin filament organization1.56E-02
137GO:0005985: sucrose metabolic process1.69E-02
138GO:0006071: glycerol metabolic process1.82E-02
139GO:0006636: unsaturated fatty acid biosynthetic process1.82E-02
140GO:0042254: ribosome biogenesis1.95E-02
141GO:0005992: trehalose biosynthetic process1.96E-02
142GO:0009116: nucleoside metabolic process1.96E-02
143GO:0000027: ribosomal large subunit assembly1.96E-02
144GO:0051017: actin filament bundle assembly1.96E-02
145GO:0006412: translation2.10E-02
146GO:0009695: jasmonic acid biosynthetic process2.11E-02
147GO:0010026: trichome differentiation2.11E-02
148GO:0043622: cortical microtubule organization2.11E-02
149GO:0061077: chaperone-mediated protein folding2.25E-02
150GO:0031408: oxylipin biosynthetic process2.25E-02
151GO:0030245: cellulose catabolic process2.40E-02
152GO:0009814: defense response, incompatible interaction2.40E-02
153GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.56E-02
154GO:0009294: DNA mediated transformation2.56E-02
155GO:0009411: response to UV2.56E-02
156GO:0040007: growth2.56E-02
157GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.60E-02
158GO:0019722: calcium-mediated signaling2.71E-02
159GO:0080022: primary root development3.04E-02
160GO:0008033: tRNA processing3.04E-02
161GO:0045454: cell redox homeostasis3.12E-02
162GO:0009741: response to brassinosteroid3.20E-02
163GO:0006520: cellular amino acid metabolic process3.20E-02
164GO:0045489: pectin biosynthetic process3.20E-02
165GO:0006662: glycerol ether metabolic process3.20E-02
166GO:0010182: sugar mediated signaling pathway3.20E-02
167GO:0048868: pollen tube development3.20E-02
168GO:0009646: response to absence of light3.37E-02
169GO:0006869: lipid transport3.50E-02
170GO:0071554: cell wall organization or biogenesis3.72E-02
171GO:0000302: response to reactive oxygen species3.72E-02
172GO:1901657: glycosyl compound metabolic process4.08E-02
173GO:0010090: trichome morphogenesis4.08E-02
174GO:0009828: plant-type cell wall loosening4.27E-02
175GO:0071805: potassium ion transmembrane transport4.45E-02
176GO:0007267: cell-cell signaling4.45E-02
177GO:0045490: pectin catabolic process4.83E-02
RankGO TermAdjusted P value
1GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
2GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
3GO:0050614: delta24-sterol reductase activity0.00E+00
4GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
5GO:0008859: exoribonuclease II activity0.00E+00
6GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
7GO:0008887: glycerate kinase activity0.00E+00
8GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
9GO:0050613: delta14-sterol reductase activity0.00E+00
10GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
11GO:0045435: lycopene epsilon cyclase activity0.00E+00
12GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
13GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
14GO:0019843: rRNA binding9.93E-09
15GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity6.07E-06
16GO:0010328: auxin influx transmembrane transporter activity8.29E-05
17GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.51E-04
18GO:0000248: C-5 sterol desaturase activity3.67E-04
19GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity3.67E-04
20GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity3.67E-04
21GO:0047259: glucomannan 4-beta-mannosyltransferase activity3.67E-04
22GO:0004560: alpha-L-fucosidase activity3.67E-04
23GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.67E-04
24GO:0080132: fatty acid alpha-hydroxylase activity3.67E-04
25GO:0004321: fatty-acyl-CoA synthase activity3.67E-04
26GO:0004071: aspartate-ammonia ligase activity3.67E-04
27GO:0052689: carboxylic ester hydrolase activity4.20E-04
28GO:0016762: xyloglucan:xyloglucosyl transferase activity5.72E-04
29GO:0005200: structural constituent of cytoskeleton7.88E-04
30GO:0004617: phosphoglycerate dehydrogenase activity8.00E-04
31GO:0003938: IMP dehydrogenase activity8.00E-04
32GO:0004047: aminomethyltransferase activity8.00E-04
33GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity8.00E-04
34GO:0004802: transketolase activity8.00E-04
35GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase8.00E-04
36GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity8.00E-04
37GO:0042389: omega-3 fatty acid desaturase activity8.00E-04
38GO:0008047: enzyme activator activity8.26E-04
39GO:0016798: hydrolase activity, acting on glycosyl bonds1.12E-03
40GO:0004089: carbonate dehydratase activity1.23E-03
41GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.29E-03
42GO:0003979: UDP-glucose 6-dehydrogenase activity1.29E-03
43GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity1.29E-03
44GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity1.29E-03
45GO:0070330: aromatase activity1.29E-03
46GO:0050734: hydroxycinnamoyltransferase activity1.29E-03
47GO:0004148: dihydrolipoyl dehydrogenase activity1.29E-03
48GO:0004075: biotin carboxylase activity1.29E-03
49GO:0030267: glyoxylate reductase (NADP) activity1.29E-03
50GO:0008266: poly(U) RNA binding1.38E-03
51GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.73E-03
52GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.73E-03
53GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.73E-03
54GO:0004375: glycine dehydrogenase (decarboxylating) activity1.87E-03
55GO:0016149: translation release factor activity, codon specific1.87E-03
56GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.87E-03
57GO:0003735: structural constituent of ribosome1.88E-03
58GO:0004871: signal transducer activity2.23E-03
59GO:0004845: uracil phosphoribosyltransferase activity2.51E-03
60GO:0004345: glucose-6-phosphate dehydrogenase activity2.51E-03
61GO:0016836: hydro-lyase activity2.51E-03
62GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity2.51E-03
63GO:0052793: pectin acetylesterase activity2.51E-03
64GO:0043495: protein anchor2.51E-03
65GO:0030570: pectate lyase activity2.77E-03
66GO:0003924: GTPase activity2.97E-03
67GO:0003727: single-stranded RNA binding3.01E-03
68GO:0051287: NAD binding3.02E-03
69GO:0003989: acetyl-CoA carboxylase activity3.21E-03
70GO:0009922: fatty acid elongase activity3.21E-03
71GO:0018685: alkane 1-monooxygenase activity3.21E-03
72GO:0016773: phosphotransferase activity, alcohol group as acceptor3.21E-03
73GO:0016208: AMP binding3.96E-03
74GO:0004130: cytochrome-c peroxidase activity3.96E-03
75GO:0016688: L-ascorbate peroxidase activity3.96E-03
76GO:0004791: thioredoxin-disulfide reductase activity4.09E-03
77GO:0016788: hydrolase activity, acting on ester bonds4.63E-03
78GO:0051920: peroxiredoxin activity4.78E-03
79GO:0051753: mannan synthase activity4.78E-03
80GO:0004849: uridine kinase activity4.78E-03
81GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity4.78E-03
82GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor5.35E-03
83GO:0051015: actin filament binding5.35E-03
84GO:0019899: enzyme binding5.64E-03
85GO:0016722: oxidoreductase activity, oxidizing metal ions6.05E-03
86GO:0005525: GTP binding6.28E-03
87GO:0004564: beta-fructofuranosidase activity6.56E-03
88GO:0016209: antioxidant activity6.56E-03
89GO:0004033: aldo-keto reductase (NADP) activity6.56E-03
90GO:0015250: water channel activity6.80E-03
91GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water7.52E-03
92GO:0003747: translation release factor activity8.54E-03
93GO:0016207: 4-coumarate-CoA ligase activity8.54E-03
94GO:0008889: glycerophosphodiester phosphodiesterase activity8.54E-03
95GO:0004575: sucrose alpha-glucosidase activity9.60E-03
96GO:0047617: acyl-CoA hydrolase activity9.60E-03
97GO:0004805: trehalose-phosphatase activity1.07E-02
98GO:0000175: 3'-5'-exoribonuclease activity1.43E-02
99GO:0042802: identical protein binding1.48E-02
100GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.56E-02
101GO:0005198: structural molecule activity1.64E-02
102GO:0015293: symporter activity1.64E-02
103GO:0008146: sulfotransferase activity1.69E-02
104GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.70E-02
105GO:0051536: iron-sulfur cluster binding1.96E-02
106GO:0005528: FK506 binding1.96E-02
107GO:0003690: double-stranded DNA binding2.04E-02
108GO:0015079: potassium ion transmembrane transporter activity2.11E-02
109GO:0015171: amino acid transmembrane transporter activity2.18E-02
110GO:0019706: protein-cysteine S-palmitoyltransferase activity2.25E-02
111GO:0004540: ribonuclease activity2.25E-02
112GO:0022891: substrate-specific transmembrane transporter activity2.56E-02
113GO:0004650: polygalacturonase activity2.56E-02
114GO:0008810: cellulase activity2.56E-02
115GO:0008514: organic anion transmembrane transporter activity2.71E-02
116GO:0047134: protein-disulfide reductase activity2.87E-02
117GO:0005215: transporter activity3.21E-02
118GO:0004872: receptor activity3.55E-02
119GO:0016740: transferase activity3.56E-02
120GO:0000156: phosphorelay response regulator activity4.08E-02
121GO:0016759: cellulose synthase activity4.27E-02
122GO:0016491: oxidoreductase activity4.28E-02
123GO:0008483: transaminase activity4.45E-02
124GO:0005507: copper ion binding4.45E-02
125GO:0016413: O-acetyltransferase activity4.64E-02
126GO:0016597: amino acid binding4.64E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0009507: chloroplast2.12E-23
3GO:0009570: chloroplast stroma8.39E-21
4GO:0009941: chloroplast envelope4.73E-16
5GO:0009579: thylakoid1.46E-10
6GO:0009535: chloroplast thylakoid membrane3.11E-09
7GO:0031977: thylakoid lumen3.52E-09
8GO:0009543: chloroplast thylakoid lumen9.93E-09
9GO:0009505: plant-type cell wall2.31E-08
10GO:0046658: anchored component of plasma membrane1.46E-07
11GO:0045298: tubulin complex4.48E-07
12GO:0048046: apoplast6.43E-07
13GO:0031225: anchored component of membrane6.64E-07
14GO:0009534: chloroplast thylakoid1.45E-06
15GO:0005618: cell wall5.48E-06
16GO:0016020: membrane8.31E-05
17GO:0009654: photosystem II oxygen evolving complex1.95E-04
18GO:0042651: thylakoid membrane1.95E-04
19GO:0009547: plastid ribosome3.67E-04
20GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex3.67E-04
21GO:0005576: extracellular region4.29E-04
22GO:0005886: plasma membrane5.55E-04
23GO:0008290: F-actin capping protein complex8.00E-04
24GO:0042170: plastid membrane8.00E-04
25GO:0005884: actin filament9.51E-04
26GO:0000311: plastid large ribosomal subunit1.08E-03
27GO:0005840: ribosome1.12E-03
28GO:0009528: plastid inner membrane1.29E-03
29GO:0030095: chloroplast photosystem II1.38E-03
30GO:0005775: vacuolar lumen1.87E-03
31GO:0005960: glycine cleavage complex1.87E-03
32GO:0032432: actin filament bundle1.87E-03
33GO:0009532: plastid stroma2.32E-03
34GO:0009527: plastid outer membrane2.51E-03
35GO:0000178: exosome (RNase complex)3.21E-03
36GO:0009506: plasmodesma3.21E-03
37GO:0031209: SCAR complex3.96E-03
38GO:0019898: extrinsic component of membrane4.39E-03
39GO:0009523: photosystem II4.39E-03
40GO:0009533: chloroplast stromal thylakoid5.64E-03
41GO:0010319: stromule6.05E-03
42GO:0009539: photosystem II reaction center7.52E-03
43GO:0005763: mitochondrial small ribosomal subunit8.54E-03
44GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)8.54E-03
45GO:0015934: large ribosomal subunit1.03E-02
46GO:0030659: cytoplasmic vesicle membrane1.56E-02
47GO:0016021: integral component of membrane1.63E-02
48GO:0030176: integral component of endoplasmic reticulum membrane1.69E-02
49GO:0000139: Golgi membrane1.69E-02
50GO:0005769: early endosome1.82E-02
51GO:0005802: trans-Golgi network1.83E-02
52GO:0005773: vacuole2.20E-02
53GO:0005768: endosome2.28E-02
54GO:0005874: microtubule2.39E-02
55GO:0031969: chloroplast membrane2.49E-02
56GO:0022626: cytosolic ribosome2.49E-02
57GO:0009504: cell plate3.55E-02
58GO:0005774: vacuolar membrane4.25E-02
59GO:0005778: peroxisomal membrane4.45E-02
60GO:0030529: intracellular ribonucleoprotein complex4.83E-02
61GO:0000932: P-body4.83E-02
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Gene type



Gene DE type