co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G67280

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090470: shoot organ boundary specification	0.00E+00
2	GO:0042493: response to drug	0.00E+00
3	GO:1905499: trichome papilla formation	0.00E+00
4	GO:0009773: photosynthetic electron transport in photosystem I	3.15E-09
5	GO:0010196: nonphotochemical quenching	2.65E-06
6	GO:0090391: granum assembly	8.95E-06
7	GO:0015979: photosynthesis	1.11E-05
8	GO:0009735: response to cytokinin	1.41E-05
9	GO:0010027: thylakoid membrane organization	2.72E-05
10	GO:0010025: wax biosynthetic process	5.22E-05
11	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.09E-04
12	GO:0042335: cuticle development	1.55E-04
13	GO:0009772: photosynthetic electron transport in photosystem II	1.59E-04
14	GO:1902025: nitrate import	2.29E-04
15	GO:0042759: long-chain fatty acid biosynthetic process	2.29E-04
16	GO:0080051: cutin transport	2.29E-04
17	GO:0090548: response to nitrate starvation	2.29E-04
18	GO:0071588: hydrogen peroxide mediated signaling pathway	2.29E-04
19	GO:0009828: plant-type cell wall loosening	3.02E-04
20	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.66E-04
21	GO:0015995: chlorophyll biosynthetic process	4.72E-04
22	GO:0015908: fatty acid transport	5.10E-04
23	GO:0043255: regulation of carbohydrate biosynthetic process	5.10E-04
24	GO:0010115: regulation of abscisic acid biosynthetic process	5.10E-04
25	GO:0001736: establishment of planar polarity	5.10E-04
26	GO:0016024: CDP-diacylglycerol biosynthetic process	5.61E-04
27	GO:0006013: mannose metabolic process	8.29E-04
28	GO:0006518: peptide metabolic process	8.29E-04
29	GO:0016042: lipid catabolic process	8.34E-04
30	GO:0010239: chloroplast mRNA processing	1.18E-03
31	GO:0080170: hydrogen peroxide transmembrane transport	1.18E-03
32	GO:0009650: UV protection	1.18E-03
33	GO:1901332: negative regulation of lateral root development	1.18E-03
34	GO:0016998: cell wall macromolecule catabolic process	1.18E-03
35	GO:0010371: regulation of gibberellin biosynthetic process	1.18E-03
36	GO:0071484: cellular response to light intensity	1.18E-03
37	GO:0030245: cellulose catabolic process	1.29E-03
38	GO:0009664: plant-type cell wall organization	1.32E-03
39	GO:0009306: protein secretion	1.52E-03
40	GO:0045727: positive regulation of translation	1.57E-03
41	GO:0030104: water homeostasis	1.57E-03
42	GO:0010222: stem vascular tissue pattern formation	1.57E-03
43	GO:0042254: ribosome biogenesis	1.61E-03
44	GO:0034220: ion transmembrane transport	1.78E-03
45	GO:0010438: cellular response to sulfur starvation	2.01E-03
46	GO:0030308: negative regulation of cell growth	2.01E-03
47	GO:0009697: salicylic acid biosynthetic process	2.01E-03
48	GO:0006564: L-serine biosynthetic process	2.01E-03
49	GO:0006461: protein complex assembly	2.01E-03
50	GO:0006665: sphingolipid metabolic process	2.01E-03
51	GO:0009624: response to nematode	2.25E-03
52	GO:0009913: epidermal cell differentiation	2.48E-03
53	GO:0006655: phosphatidylglycerol biosynthetic process	2.48E-03
54	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	2.48E-03
55	GO:0010337: regulation of salicylic acid metabolic process	2.48E-03
56	GO:0009759: indole glucosinolate biosynthetic process	2.48E-03
57	GO:0006561: proline biosynthetic process	2.48E-03
58	GO:0042372: phylloquinone biosynthetic process	2.97E-03
59	GO:1901259: chloroplast rRNA processing	2.97E-03
60	GO:0010019: chloroplast-nucleus signaling pathway	2.97E-03
61	GO:0045893: positive regulation of transcription, DNA-templated	3.05E-03
62	GO:1900057: positive regulation of leaf senescence	3.50E-03
63	GO:0010444: guard mother cell differentiation	3.50E-03
64	GO:0006400: tRNA modification	3.50E-03
65	GO:0009395: phospholipid catabolic process	3.50E-03
66	GO:0006633: fatty acid biosynthetic process	4.00E-03
67	GO:0008610: lipid biosynthetic process	4.06E-03
68	GO:0030091: protein repair	4.06E-03
69	GO:0006353: DNA-templated transcription, termination	4.06E-03
70	GO:0006605: protein targeting	4.06E-03
71	GO:0031540: regulation of anthocyanin biosynthetic process	4.06E-03
72	GO:0045490: pectin catabolic process	4.51E-03
73	GO:0009657: plastid organization	4.65E-03
74	GO:0032544: plastid translation	4.65E-03
75	GO:0010311: lateral root formation	4.66E-03
76	GO:0010206: photosystem II repair	5.27E-03
77	GO:0034765: regulation of ion transmembrane transport	5.27E-03
78	GO:0010205: photoinhibition	5.91E-03
79	GO:0042761: very long-chain fatty acid biosynthetic process	5.91E-03
80	GO:0006032: chitin catabolic process	6.58E-03
81	GO:0009688: abscisic acid biosynthetic process	6.58E-03
82	GO:0048829: root cap development	6.58E-03
83	GO:0006949: syncytium formation	6.58E-03
84	GO:0010114: response to red light	7.25E-03
85	GO:0000038: very long-chain fatty acid metabolic process	7.28E-03
86	GO:0008285: negative regulation of cell proliferation	7.28E-03
87	GO:0009750: response to fructose	7.28E-03
88	GO:0018119: peptidyl-cysteine S-nitrosylation	7.28E-03
89	GO:0048765: root hair cell differentiation	7.28E-03
90	GO:0046856: phosphatidylinositol dephosphorylation	7.28E-03
91	GO:0009826: unidimensional cell growth	7.49E-03
92	GO:0002213: defense response to insect	8.00E-03
93	GO:0010588: cotyledon vascular tissue pattern formation	8.75E-03
94	GO:0010628: positive regulation of gene expression	8.75E-03
95	GO:0010229: inflorescence development	8.75E-03
96	GO:0009718: anthocyanin-containing compound biosynthetic process	8.75E-03
97	GO:0009725: response to hormone	8.75E-03
98	GO:0048467: gynoecium development	9.52E-03
99	GO:0010143: cutin biosynthetic process	9.52E-03
100	GO:0010207: photosystem II assembly	9.52E-03
101	GO:0009809: lignin biosynthetic process	9.78E-03
102	GO:0006364: rRNA processing	9.78E-03
103	GO:0009825: multidimensional cell growth	1.03E-02
104	GO:0010167: response to nitrate	1.03E-02
105	GO:0071732: cellular response to nitric oxide	1.03E-02
106	GO:0010030: positive regulation of seed germination	1.03E-02
107	GO:0010053: root epidermal cell differentiation	1.03E-02
108	GO:0080167: response to karrikin	1.03E-02
109	GO:0009737: response to abscisic acid	1.05E-02
110	GO:0000162: tryptophan biosynthetic process	1.11E-02
111	GO:0006636: unsaturated fatty acid biosynthetic process	1.11E-02
112	GO:0042023: DNA endoreduplication	1.11E-02
113	GO:0006833: water transport	1.11E-02
114	GO:2000377: regulation of reactive oxygen species metabolic process	1.20E-02
115	GO:0019953: sexual reproduction	1.28E-02
116	GO:0007017: microtubule-based process	1.28E-02
117	GO:0010073: meristem maintenance	1.28E-02
118	GO:0009269: response to desiccation	1.37E-02
119	GO:0003333: amino acid transmembrane transport	1.37E-02
120	GO:0010017: red or far-red light signaling pathway	1.46E-02
121	GO:0006869: lipid transport	1.46E-02
122	GO:0035428: hexose transmembrane transport	1.46E-02
123	GO:0009742: brassinosteroid mediated signaling pathway	1.48E-02
124	GO:0009411: response to UV	1.56E-02
125	GO:0071369: cellular response to ethylene stimulus	1.56E-02
126	GO:0010227: floral organ abscission	1.56E-02
127	GO:0010091: trichome branching	1.65E-02
128	GO:0042127: regulation of cell proliferation	1.65E-02
129	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.75E-02
130	GO:0042631: cellular response to water deprivation	1.85E-02
131	GO:0042391: regulation of membrane potential	1.85E-02
132	GO:0080022: primary root development	1.85E-02
133	GO:0071472: cellular response to salt stress	1.95E-02
134	GO:0009958: positive gravitropism	1.95E-02
135	GO:0010305: leaf vascular tissue pattern formation	1.95E-02
136	GO:0010182: sugar mediated signaling pathway	1.95E-02
137	GO:0046323: glucose import	1.95E-02
138	GO:0009741: response to brassinosteroid	1.95E-02
139	GO:0042744: hydrogen peroxide catabolic process	1.99E-02
140	GO:0015986: ATP synthesis coupled proton transport	2.05E-02
141	GO:0042752: regulation of circadian rhythm	2.05E-02
142	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.27E-02
143	GO:0000302: response to reactive oxygen species	2.27E-02
144	GO:0016032: viral process	2.37E-02
145	GO:0007623: circadian rhythm	2.42E-02
146	GO:0071281: cellular response to iron ion	2.48E-02
147	GO:0009651: response to salt stress	2.50E-02
148	GO:0010252: auxin homeostasis	2.60E-02
149	GO:0009734: auxin-activated signaling pathway	2.61E-02
150	GO:0071555: cell wall organization	2.70E-02
151	GO:0071805: potassium ion transmembrane transport	2.71E-02
152	GO:0009739: response to gibberellin	2.71E-02
153	GO:0009627: systemic acquired resistance	3.19E-02
154	GO:0010411: xyloglucan metabolic process	3.31E-02
155	GO:0048573: photoperiodism, flowering	3.31E-02
156	GO:0030244: cellulose biosynthetic process	3.56E-02
157	GO:0000160: phosphorelay signal transduction system	3.68E-02
158	GO:0009631: cold acclimation	3.94E-02
159	GO:0007568: aging	3.94E-02
160	GO:0006865: amino acid transport	4.08E-02
161	GO:0009637: response to blue light	4.21E-02
162	GO:0034599: cellular response to oxidative stress	4.34E-02
163	GO:0006810: transport	4.70E-02
164	GO:0005975: carbohydrate metabolic process	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
2	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
3	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
4	GO:0052689: carboxylic ester hydrolase activity	8.79E-05
5	GO:0045485: omega-6 fatty acid desaturase activity	2.29E-04
6	GO:0008909: isochorismate synthase activity	2.29E-04
7	GO:0019210: kinase inhibitor activity	2.29E-04
8	GO:0015245: fatty acid transporter activity	2.29E-04
9	GO:0016788: hydrolase activity, acting on ester bonds	3.05E-04
10	GO:0016746: transferase activity, transferring acyl groups	3.65E-04
11	GO:0019843: rRNA binding	4.96E-04
12	GO:0016630: protochlorophyllide reductase activity	5.10E-04
13	GO:0004617: phosphoglycerate dehydrogenase activity	5.10E-04
14	GO:0005528: FK506 binding	9.81E-04
15	GO:0016851: magnesium chelatase activity	1.18E-03
16	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.18E-03
17	GO:0030570: pectate lyase activity	1.40E-03
18	GO:0008810: cellulase activity	1.40E-03
19	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.57E-03
20	GO:0010328: auxin influx transmembrane transporter activity	1.57E-03
21	GO:0052793: pectin acetylesterase activity	1.57E-03
22	GO:0042277: peptide binding	1.57E-03
23	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	1.57E-03
24	GO:0010011: auxin binding	1.57E-03
25	GO:0009922: fatty acid elongase activity	2.01E-03
26	GO:0003959: NADPH dehydrogenase activity	2.01E-03
27	GO:0004130: cytochrome-c peroxidase activity	2.48E-03
28	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.48E-03
29	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	2.48E-03
30	GO:0016688: L-ascorbate peroxidase activity	2.48E-03
31	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.48E-03
32	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.97E-03
33	GO:0004559: alpha-mannosidase activity	2.97E-03
34	GO:0005242: inward rectifier potassium channel activity	2.97E-03
35	GO:0016597: amino acid binding	3.22E-03
36	GO:0015250: water channel activity	3.41E-03
37	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.89E-03
38	GO:0030246: carbohydrate binding	4.02E-03
39	GO:0052747: sinapyl alcohol dehydrogenase activity	4.06E-03
40	GO:0043022: ribosome binding	4.06E-03
41	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.44E-03
42	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	5.27E-03
43	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	6.12E-03
44	GO:0004568: chitinase activity	6.58E-03
45	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	8.00E-03
46	GO:0045551: cinnamyl-alcohol dehydrogenase activity	8.00E-03
47	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	8.46E-03
48	GO:0004565: beta-galactosidase activity	8.75E-03
49	GO:0004022: alcohol dehydrogenase (NAD) activity	8.75E-03
50	GO:0008266: poly(U) RNA binding	9.52E-03
51	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.11E-02
52	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.11E-02
53	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.11E-02
54	GO:0004176: ATP-dependent peptidase activity	1.37E-02
55	GO:0030551: cyclic nucleotide binding	1.85E-02
56	GO:0005249: voltage-gated potassium channel activity	1.85E-02
57	GO:0016829: lyase activity	1.90E-02
58	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.95E-02
59	GO:0005355: glucose transmembrane transporter activity	2.05E-02
60	GO:0050662: coenzyme binding	2.05E-02
61	GO:0004872: receptor activity	2.16E-02
62	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.27E-02
63	GO:0004518: nuclease activity	2.37E-02
64	GO:0000156: phosphorelay response regulator activity	2.48E-02
65	GO:0016791: phosphatase activity	2.60E-02
66	GO:0005200: structural constituent of cytoskeleton	2.71E-02
67	GO:0042802: identical protein binding	3.07E-02
68	GO:0030247: polysaccharide binding	3.31E-02
69	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.31E-02
70	GO:0004222: metalloendopeptidase activity	3.81E-02
71	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.81E-02
72	GO:0016491: oxidoreductase activity	4.02E-02
73	GO:0003993: acid phosphatase activity	4.34E-02
74	GO:0051539: 4 iron, 4 sulfur cluster binding	4.62E-02
75	GO:0004672: protein kinase activity	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0009515: granal stacked thylakoid	0.00E+00
2	GO:0010240: plastid pyruvate dehydrogenase complex	0.00E+00
3	GO:0009535: chloroplast thylakoid membrane	4.01E-17
4	GO:0009534: chloroplast thylakoid	3.57E-15
5	GO:0009507: chloroplast	3.53E-12
6	GO:0009579: thylakoid	2.52E-10
7	GO:0009543: chloroplast thylakoid lumen	4.42E-10
8	GO:0030095: chloroplast photosystem II	7.82E-07
9	GO:0009941: chloroplast envelope	1.08E-06
10	GO:0031977: thylakoid lumen	6.23E-06
11	GO:0005618: cell wall	1.23E-05
12	GO:0048046: apoplast	3.87E-05
13	GO:0009570: chloroplast stroma	1.18E-04
14	GO:0043674: columella	2.29E-04
15	GO:0009923: fatty acid elongase complex	2.29E-04
16	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.04E-04
17	GO:0005576: extracellular region	4.91E-04
18	GO:0030093: chloroplast photosystem I	5.10E-04
19	GO:0005886: plasma membrane	6.19E-04
20	GO:0010007: magnesium chelatase complex	8.29E-04
21	GO:0009897: external side of plasma membrane	8.29E-04
22	GO:0009654: photosystem II oxygen evolving complex	1.08E-03
23	GO:0015630: microtubule cytoskeleton	1.18E-03
24	GO:0009523: photosystem II	2.21E-03
25	GO:0019898: extrinsic component of membrane	2.21E-03
26	GO:0016020: membrane	2.41E-03
27	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	2.48E-03
28	GO:0010287: plastoglobule	2.80E-03
29	GO:0009295: nucleoid	3.04E-03
30	GO:0009533: chloroplast stromal thylakoid	3.50E-03
31	GO:0042807: central vacuole	3.50E-03
32	GO:0009986: cell surface	3.50E-03
33	GO:0009505: plant-type cell wall	3.73E-03
34	GO:0008180: COP9 signalosome	5.27E-03
35	GO:0016021: integral component of membrane	6.57E-03
36	GO:0009508: plastid chromosome	8.75E-03
37	GO:0005578: proteinaceous extracellular matrix	8.75E-03
38	GO:0005840: ribosome	8.92E-03
39	GO:0031969: chloroplast membrane	1.03E-02
40	GO:0031225: anchored component of membrane	1.83E-02
41	GO:0005887: integral component of plasma membrane	2.49E-02
42	GO:0010319: stromule	2.71E-02
43	GO:0046658: anchored component of plasma membrane	3.20E-02
44	GO:0019005: SCF ubiquitin ligase complex	3.56E-02