co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G67260

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:2000505: regulation of energy homeostasis	0.00E+00
3	GO:0033494: ferulate metabolic process	0.00E+00
4	GO:0006066: alcohol metabolic process	0.00E+00
5	GO:0009773: photosynthetic electron transport in photosystem I	2.55E-11
6	GO:0015979: photosynthesis	6.89E-08
7	GO:0080170: hydrogen peroxide transmembrane transport	2.08E-05
8	GO:0016120: carotene biosynthetic process	6.05E-05
9	GO:0009735: response to cytokinin	1.02E-04
10	GO:0071277: cellular response to calcium ion	2.32E-04
11	GO:1904966: positive regulation of vitamin E biosynthetic process	2.32E-04
12	GO:1904964: positive regulation of phytol biosynthetic process	2.32E-04
13	GO:0033481: galacturonate biosynthetic process	2.32E-04
14	GO:0042371: vitamin K biosynthetic process	2.32E-04
15	GO:0071588: hydrogen peroxide mediated signaling pathway	2.32E-04
16	GO:0046520: sphingoid biosynthetic process	2.32E-04
17	GO:0010205: photoinhibition	3.67E-04
18	GO:0010115: regulation of abscisic acid biosynthetic process	5.15E-04
19	GO:0001736: establishment of planar polarity	5.15E-04
20	GO:0010024: phytochromobilin biosynthetic process	5.15E-04
21	GO:1902326: positive regulation of chlorophyll biosynthetic process	5.15E-04
22	GO:0043255: regulation of carbohydrate biosynthetic process	5.15E-04
23	GO:0018298: protein-chromophore linkage	5.47E-04
24	GO:0016024: CDP-diacylglycerol biosynthetic process	5.68E-04
25	GO:0010143: cutin biosynthetic process	7.26E-04
26	GO:0010167: response to nitrate	8.11E-04
27	GO:0015714: phosphoenolpyruvate transport	8.37E-04
28	GO:0006788: heme oxidation	8.37E-04
29	GO:0006636: unsaturated fatty acid biosynthetic process	9.01E-04
30	GO:0006168: adenine salvage	1.19E-03
31	GO:0006166: purine ribonucleoside salvage	1.19E-03
32	GO:0071484: cellular response to light intensity	1.19E-03
33	GO:0009650: UV protection	1.19E-03
34	GO:0016998: cell wall macromolecule catabolic process	1.20E-03
35	GO:0015713: phosphoglycerate transport	1.59E-03
36	GO:0045727: positive regulation of translation	1.59E-03
37	GO:0030104: water homeostasis	1.59E-03
38	GO:0006810: transport	1.61E-03
39	GO:0034220: ion transmembrane transport	1.81E-03
40	GO:0006564: L-serine biosynthetic process	2.03E-03
41	GO:0006461: protein complex assembly	2.03E-03
42	GO:0044209: AMP salvage	2.03E-03
43	GO:0071555: cell wall organization	2.46E-03
44	GO:0055114: oxidation-reduction process	2.50E-03
45	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.50E-03
46	GO:0035435: phosphate ion transmembrane transport	2.50E-03
47	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	2.50E-03
48	GO:0010337: regulation of salicylic acid metabolic process	2.50E-03
49	GO:0006561: proline biosynthetic process	2.50E-03
50	GO:0010405: arabinogalactan protein metabolic process	2.50E-03
51	GO:0006751: glutathione catabolic process	2.50E-03
52	GO:0042549: photosystem II stabilization	2.50E-03
53	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.50E-03
54	GO:0009913: epidermal cell differentiation	2.50E-03
55	GO:0006655: phosphatidylglycerol biosynthetic process	2.50E-03
56	GO:0006694: steroid biosynthetic process	3.00E-03
57	GO:0010019: chloroplast-nucleus signaling pathway	3.00E-03
58	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.00E-03
59	GO:0050829: defense response to Gram-negative bacterium	3.54E-03
60	GO:1900057: positive regulation of leaf senescence	3.54E-03
61	GO:0006400: tRNA modification	3.54E-03
62	GO:0009395: phospholipid catabolic process	3.54E-03
63	GO:0009772: photosynthetic electron transport in photosystem II	3.54E-03
64	GO:0016042: lipid catabolic process	3.84E-03
65	GO:0010411: xyloglucan metabolic process	4.07E-03
66	GO:0006633: fatty acid biosynthetic process	4.07E-03
67	GO:0046620: regulation of organ growth	4.10E-03
68	GO:0006605: protein targeting	4.10E-03
69	GO:0009704: de-etiolation	4.10E-03
70	GO:0055075: potassium ion homeostasis	4.10E-03
71	GO:0008610: lipid biosynthetic process	4.10E-03
72	GO:0030091: protein repair	4.10E-03
73	GO:0032544: plastid translation	4.70E-03
74	GO:0009808: lignin metabolic process	4.70E-03
75	GO:0009657: plastid organization	4.70E-03
76	GO:0010206: photosystem II repair	5.32E-03
77	GO:0090333: regulation of stomatal closure	5.32E-03
78	GO:0009638: phototropism	5.97E-03
79	GO:0006032: chitin catabolic process	6.65E-03
80	GO:0009688: abscisic acid biosynthetic process	6.65E-03
81	GO:0048829: root cap development	6.65E-03
82	GO:0009750: response to fructose	7.35E-03
83	GO:0018119: peptidyl-cysteine S-nitrosylation	7.35E-03
84	GO:0048765: root hair cell differentiation	7.35E-03
85	GO:0000038: very long-chain fatty acid metabolic process	7.35E-03
86	GO:0009926: auxin polar transport	7.36E-03
87	GO:0042546: cell wall biogenesis	7.65E-03
88	GO:0015706: nitrate transport	8.08E-03
89	GO:0010628: positive regulation of gene expression	8.84E-03
90	GO:0006006: glucose metabolic process	8.84E-03
91	GO:0009725: response to hormone	8.84E-03
92	GO:0009416: response to light stimulus	9.58E-03
93	GO:0019253: reductive pentose-phosphate cycle	9.62E-03
94	GO:0010207: photosystem II assembly	9.62E-03
95	GO:0009809: lignin biosynthetic process	9.93E-03
96	GO:0071732: cellular response to nitric oxide	1.04E-02
97	GO:0010030: positive regulation of seed germination	1.04E-02
98	GO:0010053: root epidermal cell differentiation	1.04E-02
99	GO:0009225: nucleotide-sugar metabolic process	1.04E-02
100	GO:0009825: multidimensional cell growth	1.04E-02
101	GO:0006857: oligopeptide transport	1.06E-02
102	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.10E-02
103	GO:0010025: wax biosynthetic process	1.13E-02
104	GO:0006833: water transport	1.13E-02
105	GO:0019762: glucosinolate catabolic process	1.13E-02
106	GO:0006096: glycolytic process	1.18E-02
107	GO:0006487: protein N-linked glycosylation	1.21E-02
108	GO:0009768: photosynthesis, light harvesting in photosystem I	1.30E-02
109	GO:0007017: microtubule-based process	1.30E-02
110	GO:0003333: amino acid transmembrane transport	1.39E-02
111	GO:0031408: oxylipin biosynthetic process	1.39E-02
112	GO:0030245: cellulose catabolic process	1.48E-02
113	GO:0006869: lipid transport	1.49E-02
114	GO:0009411: response to UV	1.57E-02
115	GO:0071369: cellular response to ethylene stimulus	1.57E-02
116	GO:0009306: protein secretion	1.67E-02
117	GO:0016117: carotenoid biosynthetic process	1.77E-02
118	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.77E-02
119	GO:0042631: cellular response to water deprivation	1.87E-02
120	GO:0042335: cuticle development	1.87E-02
121	GO:0010182: sugar mediated signaling pathway	1.97E-02
122	GO:0009958: positive gravitropism	1.97E-02
123	GO:0042744: hydrogen peroxide catabolic process	2.02E-02
124	GO:0015986: ATP synthesis coupled proton transport	2.07E-02
125	GO:0000302: response to reactive oxygen species	2.29E-02
126	GO:0016132: brassinosteroid biosynthetic process	2.29E-02
127	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.29E-02
128	GO:0016032: viral process	2.40E-02
129	GO:0007623: circadian rhythm	2.46E-02
130	GO:0010150: leaf senescence	2.46E-02
131	GO:0071281: cellular response to iron ion	2.51E-02
132	GO:0009651: response to salt stress	2.57E-02
133	GO:0009414: response to water deprivation	2.66E-02
134	GO:0006979: response to oxidative stress	2.79E-02
135	GO:0007165: signal transduction	2.95E-02
136	GO:0010027: thylakoid membrane organization	2.98E-02
137	GO:0042128: nitrate assimilation	3.22E-02
138	GO:0015995: chlorophyll biosynthetic process	3.34E-02
139	GO:0016311: dephosphorylation	3.47E-02
140	GO:0030244: cellulose biosynthetic process	3.59E-02
141	GO:0010311: lateral root formation	3.72E-02
142	GO:0048767: root hair elongation	3.72E-02
143	GO:0000160: phosphorelay signal transduction system	3.72E-02
144	GO:0010218: response to far red light	3.85E-02
145	GO:0009834: plant-type secondary cell wall biogenesis	3.85E-02
146	GO:0009407: toxin catabolic process	3.85E-02
147	GO:0009631: cold acclimation	3.98E-02
148	GO:0006865: amino acid transport	4.12E-02
149	GO:0009637: response to blue light	4.25E-02
150	GO:0009409: response to cold	4.27E-02
151	GO:0034599: cellular response to oxidative stress	4.39E-02
152	GO:0080167: response to karrikin	4.69E-02
153	GO:0055085: transmembrane transport	4.74E-02

Rank	GO Term	Adjusted P value
1	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
2	GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity	0.00E+00
3	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
4	GO:1990534: thermospermine oxidase activity	0.00E+00
5	GO:0050614: delta24-sterol reductase activity	0.00E+00
6	GO:0045436: lycopene beta cyclase activity	0.00E+00
7	GO:0046577: long-chain-alcohol oxidase activity	0.00E+00
8	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
9	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
10	GO:0045485: omega-6 fatty acid desaturase activity	2.32E-04
11	GO:0000170: sphingosine hydroxylase activity	2.32E-04
12	GO:0030794: (S)-coclaurine-N-methyltransferase activity	2.32E-04
13	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	2.32E-04
14	GO:0016788: hydrolase activity, acting on ester bonds	3.14E-04
15	GO:0016168: chlorophyll binding	4.18E-04
16	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	5.15E-04
17	GO:0003839: gamma-glutamylcyclotransferase activity	5.15E-04
18	GO:0004617: phosphoglycerate dehydrogenase activity	5.15E-04
19	GO:0042284: sphingolipid delta-4 desaturase activity	5.15E-04
20	GO:0052689: carboxylic ester hydrolase activity	5.40E-04
21	GO:0004565: beta-galactosidase activity	6.45E-04
22	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	8.37E-04
23	GO:0050734: hydroxycinnamoyltransferase activity	8.37E-04
24	GO:0015293: symporter activity	1.17E-03
25	GO:0003999: adenine phosphoribosyltransferase activity	1.19E-03
26	GO:0016851: magnesium chelatase activity	1.19E-03
27	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.19E-03
28	GO:0001872: (1->3)-beta-D-glucan binding	1.19E-03
29	GO:0022891: substrate-specific transmembrane transporter activity	1.42E-03
30	GO:0050378: UDP-glucuronate 4-epimerase activity	1.59E-03
31	GO:0004392: heme oxygenase (decyclizing) activity	1.59E-03
32	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	1.59E-03
33	GO:0015120: phosphoglycerate transmembrane transporter activity	1.59E-03
34	GO:0010011: auxin binding	1.59E-03
35	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.59E-03
36	GO:0010328: auxin influx transmembrane transporter activity	1.59E-03
37	GO:0052793: pectin acetylesterase activity	1.59E-03
38	GO:0043495: protein anchor	1.59E-03
39	GO:0016746: transferase activity, transferring acyl groups	2.38E-03
40	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.40E-03
41	GO:0016688: L-ascorbate peroxidase activity	2.50E-03
42	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.50E-03
43	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.50E-03
44	GO:0004629: phospholipase C activity	2.50E-03
45	GO:0004130: cytochrome-c peroxidase activity	2.50E-03
46	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.50E-03
47	GO:0004435: phosphatidylinositol phospholipase C activity	3.00E-03
48	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.00E-03
49	GO:0051753: mannan synthase activity	3.00E-03
50	GO:0004017: adenylate kinase activity	3.00E-03
51	GO:0004871: signal transducer activity	3.13E-03
52	GO:0015250: water channel activity	3.46E-03
53	GO:0019899: enzyme binding	3.54E-03
54	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.99E-03
55	GO:0030247: polysaccharide binding	4.07E-03
56	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.07E-03
57	GO:0052747: sinapyl alcohol dehydrogenase activity	4.10E-03
58	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	4.70E-03
59	GO:0015112: nitrate transmembrane transporter activity	5.97E-03
60	GO:0003993: acid phosphatase activity	5.97E-03
61	GO:0030234: enzyme regulator activity	6.65E-03
62	GO:0004568: chitinase activity	6.65E-03
63	GO:0045551: cinnamyl-alcohol dehydrogenase activity	8.08E-03
64	GO:0008081: phosphoric diester hydrolase activity	8.84E-03
65	GO:0004022: alcohol dehydrogenase (NAD) activity	8.84E-03
66	GO:0015114: phosphate ion transmembrane transporter activity	8.84E-03
67	GO:0051287: NAD binding	8.91E-03
68	GO:0008266: poly(U) RNA binding	9.62E-03
69	GO:0008131: primary amine oxidase activity	9.62E-03
70	GO:0003824: catalytic activity	9.91E-03
71	GO:0005215: transporter activity	1.00E-02
72	GO:0008146: sulfotransferase activity	1.04E-02
73	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.13E-02
74	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.13E-02
75	GO:0031409: pigment binding	1.13E-02
76	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.13E-02
77	GO:0005528: FK506 binding	1.21E-02
78	GO:0043424: protein histidine kinase binding	1.30E-02
79	GO:0008810: cellulase activity	1.57E-02
80	GO:0030570: pectate lyase activity	1.57E-02
81	GO:0008514: organic anion transmembrane transporter activity	1.67E-02
82	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.97E-02
83	GO:0050662: coenzyme binding	2.07E-02
84	GO:0019901: protein kinase binding	2.18E-02
85	GO:0004872: receptor activity	2.18E-02
86	GO:0015297: antiporter activity	2.34E-02
87	GO:0000156: phosphorelay response regulator activity	2.51E-02
88	GO:0016791: phosphatase activity	2.62E-02
89	GO:0005200: structural constituent of cytoskeleton	2.74E-02
90	GO:0016597: amino acid binding	2.86E-02
91	GO:0042802: identical protein binding	3.12E-02
92	GO:0008375: acetylglucosaminyltransferase activity	3.22E-02
93	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.59E-02
94	GO:0015238: drug transmembrane transporter activity	3.72E-02
95	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.85E-02
96	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.98E-02
97	GO:0016491: oxidoreductase activity	4.11E-02
98	GO:0050660: flavin adenine dinucleotide binding	4.38E-02
99	GO:0051539: 4 iron, 4 sulfur cluster binding	4.67E-02
100	GO:0050661: NADP binding	4.67E-02
101	GO:0004364: glutathione transferase activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0010240: plastid pyruvate dehydrogenase complex	0.00E+00
2	GO:0009535: chloroplast thylakoid membrane	1.02E-13
3	GO:0009507: chloroplast	1.85E-11
4	GO:0009579: thylakoid	1.88E-11
5	GO:0009534: chloroplast thylakoid	4.81E-08
6	GO:0009543: chloroplast thylakoid lumen	2.74E-07
7	GO:0016021: integral component of membrane	6.07E-07
8	GO:0031977: thylakoid lumen	6.47E-06
9	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	8.44E-06
10	GO:0009941: chloroplast envelope	2.99E-05
11	GO:0030095: chloroplast photosystem II	3.72E-05
12	GO:0048046: apoplast	4.12E-05
13	GO:0005886: plasma membrane	1.01E-04
14	GO:0009523: photosystem II	2.16E-04
15	GO:0043674: columella	2.32E-04
16	GO:0009570: chloroplast stroma	3.84E-04
17	GO:0031969: chloroplast membrane	4.51E-04
18	GO:0030093: chloroplast photosystem I	5.15E-04
19	GO:0010007: magnesium chelatase complex	8.37E-04
20	GO:0009654: photosystem II oxygen evolving complex	1.09E-03
21	GO:0015630: microtubule cytoskeleton	1.19E-03
22	GO:0005618: cell wall	1.88E-03
23	GO:0019898: extrinsic component of membrane	2.24E-03
24	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	2.50E-03
25	GO:0010287: plastoglobule	2.85E-03
26	GO:0042807: central vacuole	3.54E-03
27	GO:0009986: cell surface	3.54E-03
28	GO:0009533: chloroplast stromal thylakoid	3.54E-03
29	GO:0008180: COP9 signalosome	5.32E-03
30	GO:0031225: anchored component of membrane	5.35E-03
31	GO:0046658: anchored component of plasma membrane	6.56E-03
32	GO:0009508: plastid chromosome	8.84E-03
33	GO:0030076: light-harvesting complex	1.04E-02
34	GO:0042651: thylakoid membrane	1.30E-02
35	GO:0009522: photosystem I	2.07E-02
36	GO:0005773: vacuole	2.53E-02
37	GO:0032580: Golgi cisterna membrane	2.62E-02
38	GO:0010319: stromule	2.74E-02
39	GO:0009295: nucleoid	2.74E-02
40	GO:0005576: extracellular region	2.80E-02
41	GO:0016020: membrane	3.26E-02
42	GO:0019005: SCF ubiquitin ligase complex	3.59E-02
43	GO:0009505: plant-type cell wall	3.82E-02