co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G67030

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009877: nodulation	0.00E+00
2	GO:0046677: response to antibiotic	0.00E+00
3	GO:0090279: regulation of calcium ion import	0.00E+00
4	GO:0030644: cellular chloride ion homeostasis	0.00E+00
5	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
6	GO:0071474: cellular hyperosmotic response	0.00E+00
7	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
8	GO:0070584: mitochondrion morphogenesis	0.00E+00
9	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
10	GO:0015970: guanosine tetraphosphate biosynthetic process	0.00E+00
11	GO:1902171: regulation of tocopherol cyclase activity	0.00E+00
12	GO:0009768: photosynthesis, light harvesting in photosystem I	1.44E-12
13	GO:0015979: photosynthesis	6.98E-10
14	GO:0009645: response to low light intensity stimulus	8.59E-09
15	GO:0018298: protein-chromophore linkage	2.20E-08
16	GO:0010218: response to far red light	3.04E-08
17	GO:0010114: response to red light	1.09E-07
18	GO:0009637: response to blue light	1.62E-06
19	GO:0009644: response to high light intensity	3.90E-06
20	GO:0007623: circadian rhythm	4.46E-06
21	GO:0015995: chlorophyll biosynthetic process	1.90E-05
22	GO:0009416: response to light stimulus	4.74E-05
23	GO:0010017: red or far-red light signaling pathway	5.67E-05
24	GO:0009640: photomorphogenesis	6.13E-05
25	GO:0071470: cellular response to osmotic stress	8.20E-05
26	GO:0018002: N-terminal peptidyl-glutamic acid acetylation	1.80E-04
27	GO:0015812: gamma-aminobutyric acid transport	1.80E-04
28	GO:0006475: internal protein amino acid acetylation	1.80E-04
29	GO:0006474: N-terminal protein amino acid acetylation	1.80E-04
30	GO:0017198: N-terminal peptidyl-serine acetylation	1.80E-04
31	GO:0080065: 4-alpha-methyl-delta7-sterol oxidation	1.80E-04
32	GO:0010206: photosystem II repair	2.13E-04
33	GO:0009915: phloem sucrose loading	4.05E-04
34	GO:0051170: nuclear import	4.05E-04
35	GO:0042548: regulation of photosynthesis, light reaction	4.05E-04
36	GO:1902884: positive regulation of response to oxidative stress	4.05E-04
37	GO:0000256: allantoin catabolic process	4.05E-04
38	GO:0050992: dimethylallyl diphosphate biosynthetic process	4.05E-04
39	GO:0051262: protein tetramerization	4.05E-04
40	GO:0006883: cellular sodium ion homeostasis	4.05E-04
41	GO:0050684: regulation of mRNA processing	4.05E-04
42	GO:0055129: L-proline biosynthetic process	4.05E-04
43	GO:0009409: response to cold	6.05E-04
44	GO:1902448: positive regulation of shade avoidance	6.61E-04
45	GO:0010136: ureide catabolic process	6.61E-04
46	GO:1901562: response to paraquat	6.61E-04
47	GO:0048575: short-day photoperiodism, flowering	6.61E-04
48	GO:0003333: amino acid transmembrane transport	8.51E-04
49	GO:0048511: rhythmic process	8.51E-04
50	GO:0044211: CTP salvage	9.45E-04
51	GO:0030100: regulation of endocytosis	9.45E-04
52	GO:0006145: purine nucleobase catabolic process	9.45E-04
53	GO:1901000: regulation of response to salt stress	9.45E-04
54	GO:0010600: regulation of auxin biosynthetic process	1.25E-03
55	GO:1901002: positive regulation of response to salt stress	1.25E-03
56	GO:0015846: polyamine transport	1.25E-03
57	GO:0030104: water homeostasis	1.25E-03
58	GO:0044206: UMP salvage	1.25E-03
59	GO:0009765: photosynthesis, light harvesting	1.25E-03
60	GO:2000306: positive regulation of photomorphogenesis	1.25E-03
61	GO:0080167: response to karrikin	1.28E-03
62	GO:0006351: transcription, DNA-templated	1.34E-03
63	GO:0043097: pyrimidine nucleoside salvage	1.59E-03
64	GO:0006461: protein complex assembly	1.59E-03
65	GO:0045962: positive regulation of development, heterochronic	1.96E-03
66	GO:0006206: pyrimidine nucleobase metabolic process	1.96E-03
67	GO:0000060: protein import into nucleus, translocation	1.96E-03
68	GO:0002238: response to molecule of fungal origin	1.96E-03
69	GO:0009643: photosynthetic acclimation	1.96E-03
70	GO:0006561: proline biosynthetic process	1.96E-03
71	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.96E-03
72	GO:0006629: lipid metabolic process	2.31E-03
73	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.35E-03
74	GO:0000245: spliceosomal complex assembly	2.35E-03
75	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.35E-03
76	GO:0010077: maintenance of inflorescence meristem identity	2.35E-03
77	GO:0010196: nonphotochemical quenching	2.77E-03
78	GO:0009769: photosynthesis, light harvesting in photosystem II	2.77E-03
79	GO:0010161: red light signaling pathway	2.77E-03
80	GO:0055114: oxidation-reduction process	3.04E-03
81	GO:0010928: regulation of auxin mediated signaling pathway	3.21E-03
82	GO:0010078: maintenance of root meristem identity	3.21E-03
83	GO:0009704: de-etiolation	3.21E-03
84	GO:0050821: protein stabilization	3.21E-03
85	GO:0000160: phosphorelay signal transduction system	3.30E-03
86	GO:0006355: regulation of transcription, DNA-templated	3.51E-03
87	GO:0009827: plant-type cell wall modification	3.67E-03
88	GO:0007186: G-protein coupled receptor signaling pathway	3.67E-03
89	GO:0010100: negative regulation of photomorphogenesis	3.67E-03
90	GO:0010099: regulation of photomorphogenesis	3.67E-03
91	GO:0048507: meristem development	4.15E-03
92	GO:0090333: regulation of stomatal closure	4.15E-03
93	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.65E-03
94	GO:0042761: very long-chain fatty acid biosynthetic process	4.65E-03
95	GO:0008356: asymmetric cell division	4.65E-03
96	GO:0009735: response to cytokinin	4.81E-03
97	GO:0009658: chloroplast organization	5.04E-03
98	GO:0009641: shade avoidance	5.18E-03
99	GO:0015770: sucrose transport	5.72E-03
100	GO:0030148: sphingolipid biosynthetic process	5.72E-03
101	GO:0046856: phosphatidylinositol dephosphorylation	5.72E-03
102	GO:0009723: response to ethylene	6.07E-03
103	GO:0042538: hyperosmotic salinity response	6.43E-03
104	GO:2000028: regulation of photoperiodism, flowering	6.86E-03
105	GO:0050826: response to freezing	6.86E-03
106	GO:0018107: peptidyl-threonine phosphorylation	6.86E-03
107	GO:0009718: anthocyanin-containing compound biosynthetic process	6.86E-03
108	GO:0009767: photosynthetic electron transport chain	6.86E-03
109	GO:0009585: red, far-red light phototransduction	6.90E-03
110	GO:0010207: photosystem II assembly	7.46E-03
111	GO:0009266: response to temperature stimulus	7.46E-03
112	GO:0009909: regulation of flower development	7.64E-03
113	GO:0005985: sucrose metabolic process	8.08E-03
114	GO:0090351: seedling development	8.08E-03
115	GO:0006636: unsaturated fatty acid biosynthetic process	8.71E-03
116	GO:0009624: response to nematode	9.83E-03
117	GO:0006874: cellular calcium ion homeostasis	1.00E-02
118	GO:0009269: response to desiccation	1.07E-02
119	GO:0010431: seed maturation	1.07E-02
120	GO:0071215: cellular response to abscisic acid stimulus	1.22E-02
121	GO:0045492: xylan biosynthetic process	1.29E-02
122	GO:0070417: cellular response to cold	1.37E-02
123	GO:0010305: leaf vascular tissue pattern formation	1.52E-02
124	GO:0006814: sodium ion transport	1.60E-02
125	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.91E-02
126	GO:0030163: protein catabolic process	1.94E-02
127	GO:1901657: glycosyl compound metabolic process	1.94E-02
128	GO:0009908: flower development	1.98E-02
129	GO:0010286: heat acclimation	2.11E-02
130	GO:0009911: positive regulation of flower development	2.30E-02
131	GO:0016126: sterol biosynthetic process	2.30E-02
132	GO:0048573: photoperiodism, flowering	2.58E-02
133	GO:0016311: dephosphorylation	2.68E-02
134	GO:0007049: cell cycle	2.95E-02
135	GO:0006811: ion transport	2.97E-02
136	GO:0009631: cold acclimation	3.08E-02
137	GO:0007568: aging	3.08E-02
138	GO:0009910: negative regulation of flower development	3.08E-02
139	GO:0006865: amino acid transport	3.18E-02
140	GO:0034599: cellular response to oxidative stress	3.39E-02
141	GO:0044550: secondary metabolite biosynthetic process	3.56E-02
142	GO:0051707: response to other organism	3.93E-02
143	GO:0045892: negative regulation of transcription, DNA-templated	3.97E-02
144	GO:0009965: leaf morphogenesis	4.27E-02
145	GO:0006855: drug transmembrane transport	4.39E-02
146	GO:0000165: MAPK cascade	4.50E-02
147	GO:0032259: methylation	4.61E-02
148	GO:0006812: cation transport	4.62E-02
149	GO:0009408: response to heat	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0004567: beta-mannosidase activity	0.00E+00
2	GO:0080082: esculin beta-glucosidase activity	0.00E+00
3	GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	0.00E+00
4	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
5	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
6	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
7	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
8	GO:0019912: cyclin-dependent protein kinase activating kinase activity	0.00E+00
9	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
10	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
11	GO:0031409: pigment binding	7.72E-11
12	GO:0016168: chlorophyll binding	1.10E-08
13	GO:0046872: metal ion binding	2.71E-05
14	GO:1990189: peptide-serine-N-acetyltransferase activity	1.80E-04
15	GO:0004349: glutamate 5-kinase activity	1.80E-04
16	GO:0004350: glutamate-5-semialdehyde dehydrogenase activity	1.80E-04
17	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.80E-04
18	GO:1990190: peptide-glutamate-N-acetyltransferase activity	1.80E-04
19	GO:0052631: sphingolipid delta-8 desaturase activity	1.80E-04
20	GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	1.80E-04
21	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.80E-04
22	GO:0005227: calcium activated cation channel activity	1.80E-04
23	GO:0080079: cellobiose glucosidase activity	1.80E-04
24	GO:0016630: protochlorophyllide reductase activity	4.05E-04
25	GO:0008728: GTP diphosphokinase activity	4.05E-04
26	GO:0015180: L-alanine transmembrane transporter activity	4.05E-04
27	GO:0080045: quercetin 3'-O-glucosyltransferase activity	4.05E-04
28	GO:0015297: antiporter activity	4.44E-04
29	GO:0004848: ureidoglycolate hydrolase activity	6.61E-04
30	GO:0016805: dipeptidase activity	6.61E-04
31	GO:0004180: carboxypeptidase activity	6.61E-04
32	GO:0010277: chlorophyllide a oxygenase [overall] activity	6.61E-04
33	GO:0000254: C-4 methylsterol oxidase activity	9.45E-04
34	GO:0015181: arginine transmembrane transporter activity	9.45E-04
35	GO:0015203: polyamine transmembrane transporter activity	9.45E-04
36	GO:0015189: L-lysine transmembrane transporter activity	9.45E-04
37	GO:0005313: L-glutamate transmembrane transporter activity	1.25E-03
38	GO:0004930: G-protein coupled receptor activity	1.25E-03
39	GO:0004845: uracil phosphoribosyltransferase activity	1.25E-03
40	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.59E-03
41	GO:0051538: 3 iron, 4 sulfur cluster binding	1.59E-03
42	GO:0000156: phosphorelay response regulator activity	1.91E-03
43	GO:0004462: lactoylglutathione lyase activity	1.96E-03
44	GO:0080046: quercetin 4'-O-glucosyltransferase activity	1.96E-03
45	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.99E-03
46	GO:0005261: cation channel activity	2.35E-03
47	GO:0004849: uridine kinase activity	2.35E-03
48	GO:0004602: glutathione peroxidase activity	2.35E-03
49	GO:0008506: sucrose:proton symporter activity	2.77E-03
50	GO:0005515: protein binding	3.04E-03
51	GO:0008270: zinc ion binding	3.59E-03
52	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	3.67E-03
53	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	3.67E-03
54	GO:0000989: transcription factor activity, transcription factor binding	4.15E-03
55	GO:0005506: iron ion binding	4.34E-03
56	GO:0015174: basic amino acid transmembrane transporter activity	4.65E-03
57	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	5.18E-03
58	GO:0016787: hydrolase activity	5.36E-03
59	GO:0051537: 2 iron, 2 sulfur cluster binding	5.54E-03
60	GO:0008515: sucrose transmembrane transporter activity	5.72E-03
61	GO:0047372: acylglycerol lipase activity	5.72E-03
62	GO:0015293: symporter activity	5.75E-03
63	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	6.28E-03
64	GO:0004565: beta-galactosidase activity	6.86E-03
65	GO:0004022: alcohol dehydrogenase (NAD) activity	6.86E-03
66	GO:0005315: inorganic phosphate transmembrane transporter activity	6.86E-03
67	GO:0015171: amino acid transmembrane transporter activity	7.64E-03
68	GO:0005217: intracellular ligand-gated ion channel activity	8.08E-03
69	GO:0003712: transcription cofactor activity	8.08E-03
70	GO:0004970: ionotropic glutamate receptor activity	8.08E-03
71	GO:0004190: aspartic-type endopeptidase activity	8.08E-03
72	GO:0004672: protein kinase activity	8.71E-03
73	GO:0003677: DNA binding	8.99E-03
74	GO:0008134: transcription factor binding	9.37E-03
75	GO:0005216: ion channel activity	1.00E-02
76	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.03E-02
77	GO:0008514: organic anion transmembrane transporter activity	1.29E-02
78	GO:0016829: lyase activity	1.33E-02
79	GO:0015144: carbohydrate transmembrane transporter activity	1.48E-02
80	GO:0008080: N-acetyltransferase activity	1.52E-02
81	GO:0005351: sugar:proton symporter activity	1.67E-02
82	GO:0005215: transporter activity	1.86E-02
83	GO:0008237: metallopeptidase activity	2.11E-02
84	GO:0016491: oxidoreductase activity	2.41E-02
85	GO:0008168: methyltransferase activity	2.54E-02
86	GO:0102483: scopolin beta-glucosidase activity	2.58E-02
87	GO:0004674: protein serine/threonine kinase activity	2.65E-02
88	GO:0008236: serine-type peptidase activity	2.68E-02
89	GO:0015238: drug transmembrane transporter activity	2.87E-02
90	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.97E-02
91	GO:0004497: monooxygenase activity	3.27E-02
92	GO:0003993: acid phosphatase activity	3.39E-02
93	GO:0061630: ubiquitin protein ligase activity	3.44E-02
94	GO:0008422: beta-glucosidase activity	3.50E-02
95	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.22E-02
96	GO:0016298: lipase activity	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0009535: chloroplast thylakoid membrane	4.46E-14
2	GO:0009522: photosystem I	2.21E-11
3	GO:0009941: chloroplast envelope	2.44E-11
4	GO:0009534: chloroplast thylakoid	3.02E-11
5	GO:0010287: plastoglobule	7.02E-11
6	GO:0009579: thylakoid	4.62E-10
7	GO:0030076: light-harvesting complex	5.66E-09
8	GO:0009507: chloroplast	1.98E-06
9	GO:0009517: PSII associated light-harvesting complex II	2.45E-05
10	GO:0042651: thylakoid membrane	4.22E-05
11	GO:0009523: photosystem II	1.30E-04
12	GO:0009538: photosystem I reaction center	1.40E-04
13	GO:0009783: photosystem II antenna complex	1.80E-04
14	GO:0009706: chloroplast inner membrane	1.97E-04
15	GO:0031415: NatA complex	4.05E-04
16	GO:0016021: integral component of membrane	5.68E-04
17	GO:0016605: PML body	6.61E-04
18	GO:0009898: cytoplasmic side of plasma membrane	1.25E-03
19	GO:0030660: Golgi-associated vesicle membrane	1.25E-03
20	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.25E-03
21	GO:0005798: Golgi-associated vesicle	1.96E-03
22	GO:0016020: membrane	2.31E-03
23	GO:0009533: chloroplast stromal thylakoid	2.77E-03
24	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.21E-03
25	GO:0016604: nuclear body	4.65E-03
26	GO:0031977: thylakoid lumen	4.72E-03
27	GO:0005765: lysosomal membrane	5.72E-03
28	GO:0016607: nuclear speck	8.42E-03
29	GO:0005769: early endosome	8.71E-03
30	GO:0009543: chloroplast thylakoid lumen	1.23E-02
31	GO:0005887: integral component of plasma membrane	1.60E-02
32	GO:0009707: chloroplast outer membrane	2.77E-02
33	GO:0000151: ubiquitin ligase complex	2.77E-02
34	GO:0005789: endoplasmic reticulum membrane	3.00E-02
35	GO:0009570: chloroplast stroma	4.47E-02
36	GO:0031966: mitochondrial membrane	4.62E-02