GO Enrichment Analysis of Co-expressed Genes with
AT5G66680
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017126: nucleologenesis | 0.00E+00 |
| 2 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 3 | GO:0019427: acetyl-CoA biosynthetic process from acetate | 0.00E+00 |
| 4 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 5 | GO:0032264: IMP salvage | 0.00E+00 |
| 6 | GO:0034976: response to endoplasmic reticulum stress | 1.50E-05 |
| 7 | GO:0046686: response to cadmium ion | 5.97E-05 |
| 8 | GO:0009651: response to salt stress | 1.28E-04 |
| 9 | GO:0006083: acetate metabolic process | 1.31E-04 |
| 10 | GO:0080120: CAAX-box protein maturation | 1.31E-04 |
| 11 | GO:0009168: purine ribonucleoside monophosphate biosynthetic process | 1.31E-04 |
| 12 | GO:0071586: CAAX-box protein processing | 1.31E-04 |
| 13 | GO:0006422: aspartyl-tRNA aminoacylation | 1.31E-04 |
| 14 | GO:0030198: extracellular matrix organization | 1.31E-04 |
| 15 | GO:0043687: post-translational protein modification | 1.31E-04 |
| 16 | GO:0045454: cell redox homeostasis | 1.36E-04 |
| 17 | GO:0043067: regulation of programmed cell death | 1.62E-04 |
| 18 | GO:0009790: embryo development | 1.79E-04 |
| 19 | GO:0006413: translational initiation | 2.12E-04 |
| 20 | GO:0006099: tricarboxylic acid cycle | 2.82E-04 |
| 21 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 3.03E-04 |
| 22 | GO:0008535: respiratory chain complex IV assembly | 3.03E-04 |
| 23 | GO:0080009: mRNA methylation | 3.03E-04 |
| 24 | GO:0010155: regulation of proton transport | 3.03E-04 |
| 25 | GO:0002230: positive regulation of defense response to virus by host | 4.99E-04 |
| 26 | GO:0009735: response to cytokinin | 5.13E-04 |
| 27 | GO:0061077: chaperone-mediated protein folding | 5.61E-04 |
| 28 | GO:0006096: glycolytic process | 6.73E-04 |
| 29 | GO:1902290: positive regulation of defense response to oomycetes | 7.14E-04 |
| 30 | GO:0033617: mitochondrial respiratory chain complex IV assembly | 7.14E-04 |
| 31 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 9.47E-04 |
| 32 | GO:0006542: glutamine biosynthetic process | 9.47E-04 |
| 33 | GO:0042273: ribosomal large subunit biogenesis | 9.47E-04 |
| 34 | GO:0033356: UDP-L-arabinose metabolic process | 9.47E-04 |
| 35 | GO:0018279: protein N-linked glycosylation via asparagine | 1.20E-03 |
| 36 | GO:0045116: protein neddylation | 1.20E-03 |
| 37 | GO:0030041: actin filament polymerization | 1.20E-03 |
| 38 | GO:0001731: formation of translation preinitiation complex | 1.47E-03 |
| 39 | GO:0045040: protein import into mitochondrial outer membrane | 1.47E-03 |
| 40 | GO:0047484: regulation of response to osmotic stress | 1.47E-03 |
| 41 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.47E-03 |
| 42 | GO:0042026: protein refolding | 1.76E-03 |
| 43 | GO:0006458: 'de novo' protein folding | 1.76E-03 |
| 44 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 2.06E-03 |
| 45 | GO:0042773: ATP synthesis coupled electron transport | 2.06E-03 |
| 46 | GO:1900057: positive regulation of leaf senescence | 2.06E-03 |
| 47 | GO:0048658: anther wall tapetum development | 2.39E-03 |
| 48 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 2.39E-03 |
| 49 | GO:0009699: phenylpropanoid biosynthetic process | 2.73E-03 |
| 50 | GO:0009060: aerobic respiration | 3.08E-03 |
| 51 | GO:0080144: amino acid homeostasis | 3.08E-03 |
| 52 | GO:1900426: positive regulation of defense response to bacterium | 3.46E-03 |
| 53 | GO:0010205: photoinhibition | 3.46E-03 |
| 54 | GO:0055114: oxidation-reduction process | 3.60E-03 |
| 55 | GO:0016485: protein processing | 4.24E-03 |
| 56 | GO:0006364: rRNA processing | 4.47E-03 |
| 57 | GO:0045037: protein import into chloroplast stroma | 4.65E-03 |
| 58 | GO:0006417: regulation of translation | 4.95E-03 |
| 59 | GO:0006626: protein targeting to mitochondrion | 5.08E-03 |
| 60 | GO:0006006: glucose metabolic process | 5.08E-03 |
| 61 | GO:0010102: lateral root morphogenesis | 5.08E-03 |
| 62 | GO:0006807: nitrogen compound metabolic process | 5.08E-03 |
| 63 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 5.08E-03 |
| 64 | GO:0006446: regulation of translational initiation | 5.52E-03 |
| 65 | GO:0000162: tryptophan biosynthetic process | 6.43E-03 |
| 66 | GO:0006487: protein N-linked glycosylation | 6.91E-03 |
| 67 | GO:0030150: protein import into mitochondrial matrix | 6.91E-03 |
| 68 | GO:0051302: regulation of cell division | 7.40E-03 |
| 69 | GO:0015992: proton transport | 7.91E-03 |
| 70 | GO:0009414: response to water deprivation | 7.97E-03 |
| 71 | GO:0007005: mitochondrion organization | 8.42E-03 |
| 72 | GO:0007131: reciprocal meiotic recombination | 8.42E-03 |
| 73 | GO:0009793: embryo development ending in seed dormancy | 8.92E-03 |
| 74 | GO:0080022: primary root development | 1.06E-02 |
| 75 | GO:0008033: tRNA processing | 1.06E-02 |
| 76 | GO:0010501: RNA secondary structure unwinding | 1.06E-02 |
| 77 | GO:0080156: mitochondrial mRNA modification | 1.30E-02 |
| 78 | GO:0010252: auxin homeostasis | 1.49E-02 |
| 79 | GO:0009615: response to virus | 1.68E-02 |
| 80 | GO:0016126: sterol biosynthetic process | 1.68E-02 |
| 81 | GO:0006457: protein folding | 1.79E-02 |
| 82 | GO:0042128: nitrate assimilation | 1.82E-02 |
| 83 | GO:0030244: cellulose biosynthetic process | 2.03E-02 |
| 84 | GO:0009832: plant-type cell wall biogenesis | 2.11E-02 |
| 85 | GO:0009407: toxin catabolic process | 2.18E-02 |
| 86 | GO:0010043: response to zinc ion | 2.25E-02 |
| 87 | GO:0007568: aging | 2.25E-02 |
| 88 | GO:0009853: photorespiration | 2.41E-02 |
| 89 | GO:0006839: mitochondrial transport | 2.64E-02 |
| 90 | GO:0006631: fatty acid metabolic process | 2.72E-02 |
| 91 | GO:0000209: protein polyubiquitination | 2.96E-02 |
| 92 | GO:0009644: response to high light intensity | 3.05E-02 |
| 93 | GO:0000154: rRNA modification | 3.13E-02 |
| 94 | GO:0009636: response to toxic substance | 3.13E-02 |
| 95 | GO:0009965: leaf morphogenesis | 3.13E-02 |
| 96 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.30E-02 |
| 97 | GO:0048316: seed development | 4.11E-02 |
| 98 | GO:0009734: auxin-activated signaling pathway | 4.39E-02 |
| 99 | GO:0006396: RNA processing | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050269: coniferyl-aldehyde dehydrogenase activity | 0.00E+00 |
| 2 | GO:0005201: extracellular matrix structural constituent | 0.00E+00 |
| 3 | GO:0003876: AMP deaminase activity | 0.00E+00 |
| 4 | GO:0004631: phosphomevalonate kinase activity | 0.00E+00 |
| 5 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 6 | GO:0005507: copper ion binding | 2.55E-08 |
| 7 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 2.35E-05 |
| 8 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 3.53E-05 |
| 9 | GO:0003756: protein disulfide isomerase activity | 3.79E-05 |
| 10 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.31E-04 |
| 11 | GO:0003987: acetate-CoA ligase activity | 1.31E-04 |
| 12 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.31E-04 |
| 13 | GO:0004815: aspartate-tRNA ligase activity | 1.31E-04 |
| 14 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 1.31E-04 |
| 15 | GO:0008802: betaine-aldehyde dehydrogenase activity | 1.31E-04 |
| 16 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 1.62E-04 |
| 17 | GO:0004222: metalloendopeptidase activity | 2.20E-04 |
| 18 | GO:0001054: RNA polymerase I activity | 2.24E-04 |
| 19 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 3.03E-04 |
| 20 | GO:0019781: NEDD8 activating enzyme activity | 3.03E-04 |
| 21 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 3.03E-04 |
| 22 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 3.03E-04 |
| 23 | GO:0003743: translation initiation factor activity | 3.07E-04 |
| 24 | GO:0003723: RNA binding | 4.45E-04 |
| 25 | GO:0004324: ferredoxin-NADP+ reductase activity | 4.99E-04 |
| 26 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.99E-04 |
| 27 | GO:0000339: RNA cap binding | 7.14E-04 |
| 28 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 7.14E-04 |
| 29 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 7.14E-04 |
| 30 | GO:0016491: oxidoreductase activity | 8.61E-04 |
| 31 | GO:0008026: ATP-dependent helicase activity | 9.10E-04 |
| 32 | GO:0004576: oligosaccharyl transferase activity | 9.47E-04 |
| 33 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 9.47E-04 |
| 34 | GO:0010181: FMN binding | 9.69E-04 |
| 35 | GO:0003729: mRNA binding | 1.09E-03 |
| 36 | GO:0004356: glutamate-ammonia ligase activity | 1.20E-03 |
| 37 | GO:0008641: small protein activating enzyme activity | 1.20E-03 |
| 38 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.47E-03 |
| 39 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.47E-03 |
| 40 | GO:0016208: AMP binding | 1.47E-03 |
| 41 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.76E-03 |
| 42 | GO:0004004: ATP-dependent RNA helicase activity | 1.85E-03 |
| 43 | GO:0043295: glutathione binding | 2.06E-03 |
| 44 | GO:0004427: inorganic diphosphatase activity | 2.06E-03 |
| 45 | GO:0030515: snoRNA binding | 2.06E-03 |
| 46 | GO:0005524: ATP binding | 2.19E-03 |
| 47 | GO:0050897: cobalt ion binding | 2.37E-03 |
| 48 | GO:0008312: 7S RNA binding | 2.39E-03 |
| 49 | GO:0000166: nucleotide binding | 2.83E-03 |
| 50 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.94E-03 |
| 51 | GO:0003678: DNA helicase activity | 3.08E-03 |
| 52 | GO:0030955: potassium ion binding | 3.46E-03 |
| 53 | GO:0004743: pyruvate kinase activity | 3.46E-03 |
| 54 | GO:0044183: protein binding involved in protein folding | 4.24E-03 |
| 55 | GO:0004129: cytochrome-c oxidase activity | 4.24E-03 |
| 56 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.47E-03 |
| 57 | GO:0009982: pseudouridine synthase activity | 5.08E-03 |
| 58 | GO:0031624: ubiquitin conjugating enzyme binding | 5.52E-03 |
| 59 | GO:0004175: endopeptidase activity | 5.52E-03 |
| 60 | GO:0051536: iron-sulfur cluster binding | 6.91E-03 |
| 61 | GO:0031418: L-ascorbic acid binding | 6.91E-03 |
| 62 | GO:0003954: NADH dehydrogenase activity | 6.91E-03 |
| 63 | GO:0005528: FK506 binding | 6.91E-03 |
| 64 | GO:0004386: helicase activity | 6.93E-03 |
| 65 | GO:0043424: protein histidine kinase binding | 7.40E-03 |
| 66 | GO:0001085: RNA polymerase II transcription factor binding | 1.12E-02 |
| 67 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 1.30E-02 |
| 68 | GO:0004806: triglyceride lipase activity | 1.89E-02 |
| 69 | GO:0004721: phosphoprotein phosphatase activity | 1.89E-02 |
| 70 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.96E-02 |
| 71 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.03E-02 |
| 72 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.25E-02 |
| 73 | GO:0005515: protein binding | 2.41E-02 |
| 74 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.41E-02 |
| 75 | GO:0003746: translation elongation factor activity | 2.41E-02 |
| 76 | GO:0003697: single-stranded DNA binding | 2.41E-02 |
| 77 | GO:0050661: NADP binding | 2.64E-02 |
| 78 | GO:0004364: glutathione transferase activity | 2.80E-02 |
| 79 | GO:0046872: metal ion binding | 2.87E-02 |
| 80 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.05E-02 |
| 81 | GO:0043621: protein self-association | 3.05E-02 |
| 82 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.22E-02 |
| 83 | GO:0051287: NAD binding | 3.30E-02 |
| 84 | GO:0003779: actin binding | 4.48E-02 |
| 85 | GO:0051082: unfolded protein binding | 4.58E-02 |
| 86 | GO:0016746: transferase activity, transferring acyl groups | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036396: MIS complex | 0.00E+00 |
| 2 | GO:0019034: viral replication complex | 0.00E+00 |
| 3 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 4 | GO:0005783: endoplasmic reticulum | 7.73E-08 |
| 5 | GO:0005829: cytosol | 4.99E-07 |
| 6 | GO:0005774: vacuolar membrane | 4.69E-06 |
| 7 | GO:0005788: endoplasmic reticulum lumen | 6.12E-06 |
| 8 | GO:0008250: oligosaccharyltransferase complex | 2.35E-05 |
| 9 | GO:0005730: nucleolus | 7.69E-05 |
| 10 | GO:0005911: cell-cell junction | 1.31E-04 |
| 11 | GO:0045252: oxoglutarate dehydrogenase complex | 1.31E-04 |
| 12 | GO:0005736: DNA-directed RNA polymerase I complex | 1.34E-04 |
| 13 | GO:0005743: mitochondrial inner membrane | 1.80E-04 |
| 14 | GO:0005750: mitochondrial respiratory chain complex III | 3.34E-04 |
| 15 | GO:0005741: mitochondrial outer membrane | 5.61E-04 |
| 16 | GO:0005794: Golgi apparatus | 6.85E-04 |
| 17 | GO:0005747: mitochondrial respiratory chain complex I | 7.00E-04 |
| 18 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 7.24E-04 |
| 19 | GO:0005739: mitochondrion | 9.47E-04 |
| 20 | GO:0005746: mitochondrial respiratory chain | 1.20E-03 |
| 21 | GO:0016282: eukaryotic 43S preinitiation complex | 1.47E-03 |
| 22 | GO:0031428: box C/D snoRNP complex | 1.47E-03 |
| 23 | GO:0005759: mitochondrial matrix | 1.48E-03 |
| 24 | GO:0033290: eukaryotic 48S preinitiation complex | 1.76E-03 |
| 25 | GO:0030687: preribosome, large subunit precursor | 2.06E-03 |
| 26 | GO:0045273: respiratory chain complex II | 2.39E-03 |
| 27 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 2.39E-03 |
| 28 | GO:0034399: nuclear periphery | 2.39E-03 |
| 29 | GO:0000326: protein storage vacuole | 2.73E-03 |
| 30 | GO:0009514: glyoxysome | 2.73E-03 |
| 31 | GO:0005742: mitochondrial outer membrane translocase complex | 2.73E-03 |
| 32 | GO:0009507: chloroplast | 2.77E-03 |
| 33 | GO:0005763: mitochondrial small ribosomal subunit | 3.08E-03 |
| 34 | GO:0010494: cytoplasmic stress granule | 3.08E-03 |
| 35 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.26E-03 |
| 36 | GO:0005852: eukaryotic translation initiation factor 3 complex | 4.24E-03 |
| 37 | GO:0032040: small-subunit processome | 4.65E-03 |
| 38 | GO:0031307: integral component of mitochondrial outer membrane | 4.65E-03 |
| 39 | GO:0030176: integral component of endoplasmic reticulum membrane | 5.97E-03 |
| 40 | GO:0043234: protein complex | 6.43E-03 |
| 41 | GO:0005758: mitochondrial intermembrane space | 6.91E-03 |
| 42 | GO:0045271: respiratory chain complex I | 7.40E-03 |
| 43 | GO:0005737: cytoplasm | 1.16E-02 |
| 44 | GO:0022626: cytosolic ribosome | 1.22E-02 |
| 45 | GO:0009506: plasmodesma | 1.28E-02 |
| 46 | GO:0005773: vacuole | 1.32E-02 |
| 47 | GO:0046658: anchored component of plasma membrane | 1.46E-02 |
| 48 | GO:0005789: endoplasmic reticulum membrane | 1.57E-02 |
| 49 | GO:0000932: P-body | 1.68E-02 |
| 50 | GO:0005667: transcription factor complex | 1.82E-02 |
| 51 | GO:0000151: ubiquitin ligase complex | 2.03E-02 |
| 52 | GO:0005618: cell wall | 2.25E-02 |
| 53 | GO:0031966: mitochondrial membrane | 3.39E-02 |
| 54 | GO:0016607: nuclear speck | 4.11E-02 |
| 55 | GO:0009505: plant-type cell wall | 4.15E-02 |
| 56 | GO:0009706: chloroplast inner membrane | 4.58E-02 |