GO Enrichment Analysis of Co-expressed Genes with
AT5G65760
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 2 | GO:0070291: N-acylethanolamine metabolic process | 0.00E+00 |
| 3 | GO:0016236: macroautophagy | 0.00E+00 |
| 4 | GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase | 0.00E+00 |
| 5 | GO:0009594: detection of nutrient | 0.00E+00 |
| 6 | GO:0010111: glyoxysome organization | 0.00E+00 |
| 7 | GO:0070482: response to oxygen levels | 0.00E+00 |
| 8 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 9 | GO:0044249: cellular biosynthetic process | 0.00E+00 |
| 10 | GO:0071732: cellular response to nitric oxide | 6.70E-06 |
| 11 | GO:0071369: cellular response to ethylene stimulus | 1.85E-05 |
| 12 | GO:0019509: L-methionine salvage from methylthioadenosine | 3.24E-05 |
| 13 | GO:0006623: protein targeting to vacuole | 3.91E-05 |
| 14 | GO:0006635: fatty acid beta-oxidation | 4.35E-05 |
| 15 | GO:0006333: chromatin assembly or disassembly | 4.38E-05 |
| 16 | GO:0071281: cellular response to iron ion | 5.36E-05 |
| 17 | GO:1903648: positive regulation of chlorophyll catabolic process | 1.00E-04 |
| 18 | GO:0034063: stress granule assembly | 1.00E-04 |
| 19 | GO:0010603: regulation of cytoplasmic mRNA processing body assembly | 1.00E-04 |
| 20 | GO:0030242: pexophagy | 1.00E-04 |
| 21 | GO:0010213: non-photoreactive DNA repair | 1.00E-04 |
| 22 | GO:0006896: Golgi to vacuole transport | 1.30E-04 |
| 23 | GO:0006897: endocytosis | 2.05E-04 |
| 24 | GO:0019395: fatty acid oxidation | 2.36E-04 |
| 25 | GO:0015914: phospholipid transport | 2.36E-04 |
| 26 | GO:0050684: regulation of mRNA processing | 2.36E-04 |
| 27 | GO:0009695: jasmonic acid biosynthetic process | 3.58E-04 |
| 28 | GO:0016050: vesicle organization | 3.92E-04 |
| 29 | GO:0008333: endosome to lysosome transport | 3.92E-04 |
| 30 | GO:0032784: regulation of DNA-templated transcription, elongation | 3.92E-04 |
| 31 | GO:0032456: endocytic recycling | 5.64E-04 |
| 32 | GO:0010222: stem vascular tissue pattern formation | 7.50E-04 |
| 33 | GO:0070534: protein K63-linked ubiquitination | 7.50E-04 |
| 34 | GO:0045324: late endosome to vacuole transport | 7.50E-04 |
| 35 | GO:0006891: intra-Golgi vesicle-mediated transport | 7.83E-04 |
| 36 | GO:0006633: fatty acid biosynthetic process | 9.44E-04 |
| 37 | GO:0006656: phosphatidylcholine biosynthetic process | 9.47E-04 |
| 38 | GO:0006014: D-ribose metabolic process | 1.16E-03 |
| 39 | GO:0006301: postreplication repair | 1.16E-03 |
| 40 | GO:0003006: developmental process involved in reproduction | 1.16E-03 |
| 41 | GO:0048280: vesicle fusion with Golgi apparatus | 1.38E-03 |
| 42 | GO:0006401: RNA catabolic process | 1.62E-03 |
| 43 | GO:0010050: vegetative phase change | 1.62E-03 |
| 44 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.62E-03 |
| 45 | GO:1900057: positive regulation of leaf senescence | 1.62E-03 |
| 46 | GO:0006491: N-glycan processing | 1.87E-03 |
| 47 | GO:0030091: protein repair | 1.87E-03 |
| 48 | GO:0006605: protein targeting | 1.87E-03 |
| 49 | GO:0019375: galactolipid biosynthetic process | 1.87E-03 |
| 50 | GO:0006972: hyperosmotic response | 2.14E-03 |
| 51 | GO:0048193: Golgi vesicle transport | 2.14E-03 |
| 52 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 2.41E-03 |
| 53 | GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 2.41E-03 |
| 54 | GO:0008202: steroid metabolic process | 2.70E-03 |
| 55 | GO:0007034: vacuolar transport | 4.30E-03 |
| 56 | GO:0010053: root epidermal cell differentiation | 4.64E-03 |
| 57 | GO:0010039: response to iron ion | 4.64E-03 |
| 58 | GO:0000398: mRNA splicing, via spliceosome | 5.09E-03 |
| 59 | GO:0006406: mRNA export from nucleus | 5.37E-03 |
| 60 | GO:0006289: nucleotide-excision repair | 5.37E-03 |
| 61 | GO:2000377: regulation of reactive oxygen species metabolic process | 5.37E-03 |
| 62 | GO:0051260: protein homooligomerization | 6.14E-03 |
| 63 | GO:0031408: oxylipin biosynthetic process | 6.14E-03 |
| 64 | GO:0030433: ubiquitin-dependent ERAD pathway | 6.54E-03 |
| 65 | GO:0009306: protein secretion | 7.35E-03 |
| 66 | GO:0010150: leaf senescence | 7.61E-03 |
| 67 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 7.78E-03 |
| 68 | GO:0042147: retrograde transport, endosome to Golgi | 7.78E-03 |
| 69 | GO:0009738: abscisic acid-activated signaling pathway | 7.78E-03 |
| 70 | GO:0080022: primary root development | 8.21E-03 |
| 71 | GO:0010051: xylem and phloem pattern formation | 8.21E-03 |
| 72 | GO:0010182: sugar mediated signaling pathway | 8.65E-03 |
| 73 | GO:0009958: positive gravitropism | 8.65E-03 |
| 74 | GO:0019252: starch biosynthetic process | 9.56E-03 |
| 75 | GO:0008654: phospholipid biosynthetic process | 9.56E-03 |
| 76 | GO:0009630: gravitropism | 1.05E-02 |
| 77 | GO:0019760: glucosinolate metabolic process | 1.15E-02 |
| 78 | GO:0010252: auxin homeostasis | 1.15E-02 |
| 79 | GO:0006904: vesicle docking involved in exocytosis | 1.20E-02 |
| 80 | GO:0016579: protein deubiquitination | 1.25E-02 |
| 81 | GO:0042128: nitrate assimilation | 1.40E-02 |
| 82 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.46E-02 |
| 83 | GO:0009910: negative regulation of flower development | 1.74E-02 |
| 84 | GO:0009631: cold acclimation | 1.74E-02 |
| 85 | GO:0016051: carbohydrate biosynthetic process | 1.86E-02 |
| 86 | GO:0006099: tricarboxylic acid cycle | 1.91E-02 |
| 87 | GO:0034599: cellular response to oxidative stress | 1.91E-02 |
| 88 | GO:0000209: protein polyubiquitination | 2.29E-02 |
| 89 | GO:0009846: pollen germination | 2.61E-02 |
| 90 | GO:0042538: hyperosmotic salinity response | 2.61E-02 |
| 91 | GO:0010224: response to UV-B | 2.81E-02 |
| 92 | GO:0009742: brassinosteroid mediated signaling pathway | 3.68E-02 |
| 93 | GO:0009611: response to wounding | 3.92E-02 |
| 94 | GO:0035556: intracellular signal transduction | 4.05E-02 |
| 95 | GO:0009845: seed germination | 4.38E-02 |
| 96 | GO:0006413: translational initiation | 4.95E-02 |
| 97 | GO:0016036: cellular response to phosphate starvation | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000384: first spliceosomal transesterification activity | 0.00E+00 |
| 2 | GO:0047412: N-(long-chain-acyl)ethanolamine deacylase activity | 0.00E+00 |
| 3 | GO:0046522: S-methyl-5-thioribose kinase activity | 0.00E+00 |
| 4 | GO:0047787: delta4-3-oxosteroid 5beta-reductase activity | 0.00E+00 |
| 5 | GO:0008901: ferredoxin hydrogenase activity | 0.00E+00 |
| 6 | GO:0103073: anandamide amidohydrolase activity | 0.00E+00 |
| 7 | GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity | 0.00E+00 |
| 8 | GO:0102077: oleamide hydrolase activity | 0.00E+00 |
| 9 | GO:0070191: methionine-R-sulfoxide reductase activity | 0.00E+00 |
| 10 | GO:0030527: structural constituent of chromatin | 4.78E-06 |
| 11 | GO:0035671: enone reductase activity | 1.00E-04 |
| 12 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 1.00E-04 |
| 13 | GO:0034450: ubiquitin-ubiquitin ligase activity | 1.00E-04 |
| 14 | GO:0019707: protein-cysteine S-acyltransferase activity | 1.00E-04 |
| 15 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 2.36E-04 |
| 16 | GO:0003988: acetyl-CoA C-acyltransferase activity | 2.36E-04 |
| 17 | GO:0004180: carboxypeptidase activity | 3.92E-04 |
| 18 | GO:0005047: signal recognition particle binding | 3.92E-04 |
| 19 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 5.64E-04 |
| 20 | GO:0004300: enoyl-CoA hydratase activity | 5.64E-04 |
| 21 | GO:0004108: citrate (Si)-synthase activity | 5.64E-04 |
| 22 | GO:0008526: phosphatidylinositol transporter activity | 7.50E-04 |
| 23 | GO:0005525: GTP binding | 7.53E-04 |
| 24 | GO:0004518: nuclease activity | 8.35E-04 |
| 25 | GO:0004040: amidase activity | 9.47E-04 |
| 26 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 1.38E-03 |
| 27 | GO:0008195: phosphatidate phosphatase activity | 1.38E-03 |
| 28 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.38E-03 |
| 29 | GO:0004747: ribokinase activity | 1.38E-03 |
| 30 | GO:0003730: mRNA 3'-UTR binding | 1.38E-03 |
| 31 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 1.87E-03 |
| 32 | GO:0008865: fructokinase activity | 1.87E-03 |
| 33 | GO:0003682: chromatin binding | 1.96E-03 |
| 34 | GO:0003729: mRNA binding | 2.16E-03 |
| 35 | GO:0035091: phosphatidylinositol binding | 2.51E-03 |
| 36 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 3.63E-03 |
| 37 | GO:0003924: GTPase activity | 3.92E-03 |
| 38 | GO:0005509: calcium ion binding | 4.18E-03 |
| 39 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 6.14E-03 |
| 40 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 6.14E-03 |
| 41 | GO:0004527: exonuclease activity | 8.65E-03 |
| 42 | GO:0016853: isomerase activity | 9.10E-03 |
| 43 | GO:0004872: receptor activity | 9.56E-03 |
| 44 | GO:0004197: cysteine-type endopeptidase activity | 1.05E-02 |
| 45 | GO:0005515: protein binding | 1.34E-02 |
| 46 | GO:0008236: serine-type peptidase activity | 1.51E-02 |
| 47 | GO:0050897: cobalt ion binding | 1.74E-02 |
| 48 | GO:0003746: translation elongation factor activity | 1.86E-02 |
| 49 | GO:0003697: single-stranded DNA binding | 1.86E-02 |
| 50 | GO:0000149: SNARE binding | 1.97E-02 |
| 51 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.03E-02 |
| 52 | GO:0005484: SNAP receptor activity | 2.22E-02 |
| 53 | GO:0031625: ubiquitin protein ligase binding | 2.95E-02 |
| 54 | GO:0016746: transferase activity, transferring acyl groups | 3.61E-02 |
| 55 | GO:0003723: RNA binding | 3.75E-02 |
| 56 | GO:0000166: nucleotide binding | 3.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005785: signal recognition particle receptor complex | 0.00E+00 |
| 2 | GO:0005684: U2-type spliceosomal complex | 0.00E+00 |
| 3 | GO:0071561: nucleus-vacuole junction | 0.00E+00 |
| 4 | GO:0070274: RES complex | 0.00E+00 |
| 5 | GO:0031902: late endosome membrane | 1.07E-05 |
| 6 | GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I | 1.00E-04 |
| 7 | GO:0000152: nuclear ubiquitin ligase complex | 1.00E-04 |
| 8 | GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II | 1.00E-04 |
| 9 | GO:0005686: U2 snRNP | 1.30E-04 |
| 10 | GO:0005768: endosome | 1.79E-04 |
| 11 | GO:0005794: Golgi apparatus | 5.72E-04 |
| 12 | GO:0005770: late endosome | 6.40E-04 |
| 13 | GO:0031372: UBC13-MMS2 complex | 7.50E-04 |
| 14 | GO:0000785: chromatin | 8.35E-04 |
| 15 | GO:0005851: eukaryotic translation initiation factor 2B complex | 1.16E-03 |
| 16 | GO:0005771: multivesicular body | 1.16E-03 |
| 17 | GO:0030904: retromer complex | 1.16E-03 |
| 18 | GO:0030140: trans-Golgi network transport vesicle | 1.16E-03 |
| 19 | GO:0000815: ESCRT III complex | 1.38E-03 |
| 20 | GO:0030173: integral component of Golgi membrane | 1.38E-03 |
| 21 | GO:0000139: Golgi membrane | 1.83E-03 |
| 22 | GO:0012507: ER to Golgi transport vesicle membrane | 1.87E-03 |
| 23 | GO:0030131: clathrin adaptor complex | 1.87E-03 |
| 24 | GO:0009514: glyoxysome | 2.14E-03 |
| 25 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.14E-03 |
| 26 | GO:0010494: cytoplasmic stress granule | 2.41E-03 |
| 27 | GO:0071011: precatalytic spliceosome | 2.70E-03 |
| 28 | GO:0030125: clathrin vesicle coat | 3.00E-03 |
| 29 | GO:0005802: trans-Golgi network | 3.31E-03 |
| 30 | GO:0071013: catalytic step 2 spliceosome | 3.31E-03 |
| 31 | GO:0005829: cytosol | 3.64E-03 |
| 32 | GO:0005905: clathrin-coated pit | 6.14E-03 |
| 33 | GO:0005774: vacuolar membrane | 9.45E-03 |
| 34 | GO:0019898: extrinsic component of membrane | 9.56E-03 |
| 35 | GO:0005777: peroxisome | 9.68E-03 |
| 36 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.30E-02 |
| 37 | GO:0000151: ubiquitin ligase complex | 1.57E-02 |
| 38 | GO:0005643: nuclear pore | 1.57E-02 |
| 39 | GO:0015934: large ribosomal subunit | 1.74E-02 |
| 40 | GO:0000325: plant-type vacuole | 1.74E-02 |
| 41 | GO:0005773: vacuole | 1.97E-02 |
| 42 | GO:0031201: SNARE complex | 2.10E-02 |
| 43 | GO:0043231: intracellular membrane-bounded organelle | 2.39E-02 |
| 44 | GO:0005783: endoplasmic reticulum | 3.12E-02 |
| 45 | GO:0016607: nuclear speck | 3.17E-02 |
| 46 | GO:0010008: endosome membrane | 3.17E-02 |
| 47 | GO:0005834: heterotrimeric G-protein complex | 3.24E-02 |
| 48 | GO:0005789: endoplasmic reticulum membrane | 3.37E-02 |
| 49 | GO:0005759: mitochondrial matrix | 4.87E-02 |