GO Enrichment Analysis of Co-expressed Genes with
AT5G65360
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006226: dUMP biosynthetic process | 0.00E+00 |
| 2 | GO:0051290: protein heterotetramerization | 0.00E+00 |
| 3 | GO:0046080: dUTP metabolic process | 0.00E+00 |
| 4 | GO:1901671: positive regulation of superoxide dismutase activity | 0.00E+00 |
| 5 | GO:0016048: detection of temperature stimulus | 0.00E+00 |
| 6 | GO:0031508: pericentric heterochromatin assembly | 0.00E+00 |
| 7 | GO:0080094: response to trehalose-6-phosphate | 0.00E+00 |
| 8 | GO:0009394: 2'-deoxyribonucleotide metabolic process | 0.00E+00 |
| 9 | GO:0006269: DNA replication, synthesis of RNA primer | 9.28E-08 |
| 10 | GO:0010424: DNA methylation on cytosine within a CG sequence | 9.28E-08 |
| 11 | GO:0006342: chromatin silencing | 3.62E-06 |
| 12 | GO:0006458: 'de novo' protein folding | 6.56E-06 |
| 13 | GO:0042026: protein refolding | 6.56E-06 |
| 14 | GO:0044030: regulation of DNA methylation | 1.57E-05 |
| 15 | GO:0010216: maintenance of DNA methylation | 3.56E-05 |
| 16 | GO:0006169: adenosine salvage | 3.77E-05 |
| 17 | GO:0006260: DNA replication | 4.66E-05 |
| 18 | GO:0045717: negative regulation of fatty acid biosynthetic process | 9.40E-05 |
| 19 | GO:0009662: etioplast organization | 9.40E-05 |
| 20 | GO:0071158: positive regulation of cell cycle arrest | 9.40E-05 |
| 21 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 9.40E-05 |
| 22 | GO:0090309: positive regulation of methylation-dependent chromatin silencing | 9.40E-05 |
| 23 | GO:0061077: chaperone-mediated protein folding | 1.03E-04 |
| 24 | GO:0007005: mitochondrion organization | 1.14E-04 |
| 25 | GO:0006275: regulation of DNA replication | 1.63E-04 |
| 26 | GO:0032776: DNA methylation on cytosine | 1.63E-04 |
| 27 | GO:0035066: positive regulation of histone acetylation | 1.63E-04 |
| 28 | GO:0042276: error-prone translesion synthesis | 1.63E-04 |
| 29 | GO:0070828: heterochromatin organization | 1.63E-04 |
| 30 | GO:0006986: response to unfolded protein | 2.40E-04 |
| 31 | GO:0051085: chaperone mediated protein folding requiring cofactor | 2.40E-04 |
| 32 | GO:0035067: negative regulation of histone acetylation | 2.40E-04 |
| 33 | GO:0044209: AMP salvage | 4.13E-04 |
| 34 | GO:0042793: transcription from plastid promoter | 5.07E-04 |
| 35 | GO:0000741: karyogamy | 5.07E-04 |
| 36 | GO:0006281: DNA repair | 7.79E-04 |
| 37 | GO:0000105: histidine biosynthetic process | 8.13E-04 |
| 38 | GO:0052543: callose deposition in cell wall | 8.13E-04 |
| 39 | GO:0006002: fructose 6-phosphate metabolic process | 9.23E-04 |
| 40 | GO:0048589: developmental growth | 1.04E-03 |
| 41 | GO:0006349: regulation of gene expression by genetic imprinting | 1.15E-03 |
| 42 | GO:0016569: covalent chromatin modification | 1.18E-03 |
| 43 | GO:0051555: flavonol biosynthetic process | 1.28E-03 |
| 44 | GO:0006325: chromatin organization | 1.28E-03 |
| 45 | GO:0051301: cell division | 1.76E-03 |
| 46 | GO:0009934: regulation of meristem structural organization | 1.81E-03 |
| 47 | GO:0007010: cytoskeleton organization | 2.25E-03 |
| 48 | GO:0010468: regulation of gene expression | 2.54E-03 |
| 49 | GO:0006334: nucleosome assembly | 2.56E-03 |
| 50 | GO:0009294: DNA mediated transformation | 2.89E-03 |
| 51 | GO:0009411: response to UV | 2.89E-03 |
| 52 | GO:0042127: regulation of cell proliferation | 3.05E-03 |
| 53 | GO:0009658: chloroplast organization | 3.27E-03 |
| 54 | GO:0010197: polar nucleus fusion | 3.58E-03 |
| 55 | GO:0007059: chromosome segregation | 3.76E-03 |
| 56 | GO:0010583: response to cyclopentenone | 4.32E-03 |
| 57 | GO:0016032: viral process | 4.32E-03 |
| 58 | GO:0006310: DNA recombination | 4.70E-03 |
| 59 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 5.52E-03 |
| 60 | GO:0048767: root hair elongation | 6.60E-03 |
| 61 | GO:0046686: response to cadmium ion | 6.74E-03 |
| 62 | GO:0009910: negative regulation of flower development | 7.05E-03 |
| 63 | GO:0009909: regulation of flower development | 1.19E-02 |
| 64 | GO:0006096: glycolytic process | 1.24E-02 |
| 65 | GO:0043086: negative regulation of catalytic activity | 1.24E-02 |
| 66 | GO:0051726: regulation of cell cycle | 1.48E-02 |
| 67 | GO:0009790: embryo development | 1.86E-02 |
| 68 | GO:0045490: pectin catabolic process | 2.09E-02 |
| 69 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 2.70E-02 |
| 70 | GO:0006970: response to osmotic stress | 3.01E-02 |
| 71 | GO:0007049: cell cycle | 3.08E-02 |
| 72 | GO:0048366: leaf development | 3.20E-02 |
| 73 | GO:0080167: response to karrikin | 3.32E-02 |
| 74 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.40E-02 |
| 75 | GO:0015979: photosynthesis | 3.65E-02 |
| 76 | GO:0045892: negative regulation of transcription, DNA-templated | 3.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004636: phosphoribosyl-ATP diphosphatase activity | 0.00E+00 |
| 2 | GO:0004635: phosphoribosyl-AMP cyclohydrolase activity | 0.00E+00 |
| 3 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 4 | GO:0004170: dUTP diphosphatase activity | 0.00E+00 |
| 5 | GO:0003677: DNA binding | 1.87E-09 |
| 6 | GO:0003896: DNA primase activity | 9.28E-08 |
| 7 | GO:0046982: protein heterodimerization activity | 9.19E-07 |
| 8 | GO:0044183: protein binding involved in protein folding | 3.56E-05 |
| 9 | GO:0030337: DNA polymerase processivity factor activity | 3.77E-05 |
| 10 | GO:0004001: adenosine kinase activity | 3.77E-05 |
| 11 | GO:0051082: unfolded protein binding | 9.35E-05 |
| 12 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 1.63E-04 |
| 13 | GO:0010429: methyl-CpNpN binding | 1.63E-04 |
| 14 | GO:0010428: methyl-CpNpG binding | 1.63E-04 |
| 15 | GO:0001872: (1->3)-beta-D-glucan binding | 2.40E-04 |
| 16 | GO:0010385: double-stranded methylated DNA binding | 3.24E-04 |
| 17 | GO:0005507: copper ion binding | 3.86E-04 |
| 18 | GO:0003682: chromatin binding | 3.91E-04 |
| 19 | GO:0004784: superoxide dismutase activity | 5.07E-04 |
| 20 | GO:0003697: single-stranded DNA binding | 5.29E-04 |
| 21 | GO:0042393: histone binding | 6.01E-04 |
| 22 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 6.05E-04 |
| 23 | GO:0003872: 6-phosphofructokinase activity | 7.07E-04 |
| 24 | GO:0008327: methyl-CpG binding | 1.40E-03 |
| 25 | GO:0003887: DNA-directed DNA polymerase activity | 2.10E-03 |
| 26 | GO:0051087: chaperone binding | 2.40E-03 |
| 27 | GO:0030570: pectate lyase activity | 2.89E-03 |
| 28 | GO:0003713: transcription coactivator activity | 3.58E-03 |
| 29 | GO:0016759: cellulose synthase activity | 4.70E-03 |
| 30 | GO:0005200: structural constituent of cytoskeleton | 4.90E-03 |
| 31 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 4.90E-03 |
| 32 | GO:0030247: polysaccharide binding | 5.94E-03 |
| 33 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 6.82E-03 |
| 34 | GO:0051539: 4 iron, 4 sulfur cluster binding | 8.23E-03 |
| 35 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.33E-02 |
| 36 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.33E-02 |
| 37 | GO:0004386: helicase activity | 1.51E-02 |
| 38 | GO:0005524: ATP binding | 1.71E-02 |
| 39 | GO:0016829: lyase activity | 1.76E-02 |
| 40 | GO:0016757: transferase activity, transferring glycosyl groups | 1.82E-02 |
| 41 | GO:0046910: pectinesterase inhibitor activity | 1.99E-02 |
| 42 | GO:0008017: microtubule binding | 2.16E-02 |
| 43 | GO:0008194: UDP-glycosyltransferase activity | 2.26E-02 |
| 44 | GO:0042802: identical protein binding | 2.48E-02 |
| 45 | GO:0008168: methyltransferase activity | 2.78E-02 |
| 46 | GO:0000287: magnesium ion binding | 2.81E-02 |
| 47 | GO:0004842: ubiquitin-protein transferase activity | 2.97E-02 |
| 48 | GO:0061630: ubiquitin protein ligase activity | 3.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000788: nuclear nucleosome | 0.00E+00 |
| 2 | GO:0005721: pericentric heterochromatin | 0.00E+00 |
| 3 | GO:0000940: condensed chromosome outer kinetochore | 0.00E+00 |
| 4 | GO:0000786: nucleosome | 4.71E-11 |
| 5 | GO:0005658: alpha DNA polymerase:primase complex | 3.60E-07 |
| 6 | GO:0000790: nuclear chromatin | 2.75E-06 |
| 7 | GO:0042644: chloroplast nucleoid | 1.99E-05 |
| 8 | GO:0005730: nucleolus | 3.33E-05 |
| 9 | GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex | 3.77E-05 |
| 10 | GO:0031436: BRCA1-BARD1 complex | 3.77E-05 |
| 11 | GO:0000792: heterochromatin | 9.40E-05 |
| 12 | GO:0070531: BRCA1-A complex | 1.63E-04 |
| 13 | GO:0009295: nucleoid | 2.87E-04 |
| 14 | GO:0009579: thylakoid | 2.93E-04 |
| 15 | GO:0010369: chromocenter | 6.05E-04 |
| 16 | GO:0009506: plasmodesma | 8.05E-04 |
| 17 | GO:0005720: nuclear heterochromatin | 1.04E-03 |
| 18 | GO:0005876: spindle microtubule | 1.15E-03 |
| 19 | GO:0022626: cytosolic ribosome | 1.49E-03 |
| 20 | GO:0031225: anchored component of membrane | 2.76E-03 |
| 21 | GO:0046658: anchored component of plasma membrane | 2.81E-03 |
| 22 | GO:0009570: chloroplast stroma | 2.91E-03 |
| 23 | GO:0005634: nucleus | 3.47E-03 |
| 24 | GO:0048046: apoplast | 4.63E-03 |
| 25 | GO:0009941: chloroplast envelope | 6.84E-03 |
| 26 | GO:0005856: cytoskeleton | 9.73E-03 |
| 27 | GO:0009534: chloroplast thylakoid | 1.28E-02 |
| 28 | GO:0005759: mitochondrial matrix | 1.95E-02 |
| 29 | GO:0005618: cell wall | 2.20E-02 |
| 30 | GO:0009536: plastid | 2.64E-02 |
| 31 | GO:0009505: plant-type cell wall | 2.69E-02 |
| 32 | GO:0043231: intracellular membrane-bounded organelle | 4.70E-02 |