co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G64680

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015690: aluminum cation transport	0.00E+00
2	GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
3	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
4	GO:0072722: response to amitrole	0.00E+00
5	GO:0000470: maturation of LSU-rRNA	1.43E-05
6	GO:0046686: response to cadmium ion	4.06E-05
7	GO:0009700: indole phytoalexin biosynthetic process	7.58E-05
8	GO:0055081: anion homeostasis	7.58E-05
9	GO:0009617: response to bacterium	8.84E-05
10	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.81E-04
11	GO:0045039: protein import into mitochondrial inner membrane	3.05E-04
12	GO:0070475: rRNA base methylation	3.05E-04
13	GO:0080055: low-affinity nitrate transport	3.05E-04
14	GO:0071494: cellular response to UV-C	3.05E-04
15	GO:0010272: response to silver ion	3.05E-04
16	GO:0009625: response to insect	3.24E-04
17	GO:0009855: determination of bilateral symmetry	4.41E-04
18	GO:0001676: long-chain fatty acid metabolic process	4.41E-04
19	GO:0009646: response to absence of light	4.76E-04
20	GO:0006979: response to oxidative stress	5.59E-04
21	GO:0042273: ribosomal large subunit biogenesis	5.87E-04
22	GO:0051205: protein insertion into membrane	5.87E-04
23	GO:0000460: maturation of 5.8S rRNA	5.87E-04
24	GO:1901141: regulation of lignin biosynthetic process	5.87E-04
25	GO:1900864: mitochondrial RNA modification	5.87E-04
26	GO:0010150: leaf senescence	6.63E-04
27	GO:0009697: salicylic acid biosynthetic process	7.44E-04
28	GO:0031365: N-terminal protein amino acid modification	7.44E-04
29	GO:0006461: protein complex assembly	7.44E-04
30	GO:0018258: protein O-linked glycosylation via hydroxyproline	9.07E-04
31	GO:0009228: thiamine biosynthetic process	9.07E-04
32	GO:0010405: arabinogalactan protein metabolic process	9.07E-04
33	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.08E-03
34	GO:0009407: toxin catabolic process	1.10E-03
35	GO:0045087: innate immune response	1.25E-03
36	GO:1900056: negative regulation of leaf senescence	1.26E-03
37	GO:0080186: developmental vegetative growth	1.26E-03
38	GO:0006099: tricarboxylic acid cycle	1.31E-03
39	GO:0009819: drought recovery	1.46E-03
40	GO:0006102: isocitrate metabolic process	1.46E-03
41	GO:0006631: fatty acid metabolic process	1.48E-03
42	GO:0010120: camalexin biosynthetic process	1.66E-03
43	GO:0009699: phenylpropanoid biosynthetic process	1.66E-03
44	GO:0009636: response to toxic substance	1.80E-03
45	GO:0010112: regulation of systemic acquired resistance	1.87E-03
46	GO:1900865: chloroplast RNA modification	2.09E-03
47	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.09E-03
48	GO:0006486: protein glycosylation	2.14E-03
49	GO:0010162: seed dormancy process	2.32E-03
50	GO:0006032: chitin catabolic process	2.32E-03
51	GO:0043069: negative regulation of programmed cell death	2.32E-03
52	GO:0009414: response to water deprivation	2.55E-03
53	GO:0000272: polysaccharide catabolic process	2.56E-03
54	GO:0016485: protein processing	2.56E-03
55	GO:0015706: nitrate transport	2.80E-03
56	GO:0016569: covalent chromatin modification	2.86E-03
57	GO:0010143: cutin biosynthetic process	3.32E-03
58	GO:0046688: response to copper ion	3.59E-03
59	GO:0070588: calcium ion transmembrane transport	3.59E-03
60	GO:0010053: root epidermal cell differentiation	3.59E-03
61	GO:0010025: wax biosynthetic process	3.86E-03
62	GO:0009944: polarity specification of adaxial/abaxial axis	4.15E-03
63	GO:2000377: regulation of reactive oxygen species metabolic process	4.15E-03
64	GO:0006825: copper ion transport	4.43E-03
65	GO:0006334: nucleosome assembly	4.73E-03
66	GO:0016998: cell wall macromolecule catabolic process	4.73E-03
67	GO:0031348: negative regulation of defense response	5.03E-03
68	GO:0009294: DNA mediated transformation	5.34E-03
69	GO:0070417: cellular response to cold	5.98E-03
70	GO:0042631: cellular response to water deprivation	6.31E-03
71	GO:0009960: endosperm development	6.64E-03
72	GO:0010197: polar nucleus fusion	6.64E-03
73	GO:0010193: response to ozone	7.69E-03
74	GO:0000302: response to reactive oxygen species	7.69E-03
75	GO:0006635: fatty acid beta-oxidation	7.69E-03
76	GO:0031047: gene silencing by RNA	8.05E-03
77	GO:0042254: ribosome biogenesis	8.21E-03
78	GO:0001666: response to hypoxia	9.95E-03
79	GO:0009615: response to virus	9.95E-03
80	GO:0006974: cellular response to DNA damage stimulus	1.07E-02
81	GO:0046777: protein autophosphorylation	1.07E-02
82	GO:0009627: systemic acquired resistance	1.07E-02
83	GO:0042128: nitrate assimilation	1.07E-02
84	GO:0045454: cell redox homeostasis	1.20E-02
85	GO:0042742: defense response to bacterium	1.23E-02
86	GO:0009853: photorespiration	1.42E-02
87	GO:0006855: drug transmembrane transport	1.89E-02
88	GO:0006364: rRNA processing	2.10E-02
89	GO:0006857: oligopeptide transport	2.20E-02
90	GO:0009620: response to fungus	2.53E-02
91	GO:0009553: embryo sac development	2.64E-02
92	GO:0009624: response to nematode	2.69E-02
93	GO:0009845: seed germination	3.34E-02
94	GO:0009790: embryo development	3.53E-02
95	GO:0006633: fatty acid biosynthetic process	3.72E-02
96	GO:0007166: cell surface receptor signaling pathway	4.37E-02
97	GO:0050832: defense response to fungus	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0050220: prostaglandin-E synthase activity	0.00E+00
2	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
3	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
4	GO:0102391: decanoate--CoA ligase activity	2.05E-05
5	GO:0043295: glutathione binding	2.79E-05
6	GO:0004467: long-chain fatty acid-CoA ligase activity	2.79E-05
7	GO:0005507: copper ion binding	3.85E-05
8	GO:0031957: very long-chain fatty acid-CoA ligase activity	7.58E-05
9	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	7.58E-05
10	GO:2001147: camalexin binding	7.58E-05
11	GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity	7.58E-05
12	GO:2001227: quercitrin binding	7.58E-05
13	GO:0050897: cobalt ion binding	8.15E-05
14	GO:0004775: succinate-CoA ligase (ADP-forming) activity	1.81E-04
15	GO:0048531: beta-1,3-galactosyltransferase activity	1.81E-04
16	GO:0019172: glyoxalase III activity	1.81E-04
17	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	1.81E-04
18	GO:0004776: succinate-CoA ligase (GDP-forming) activity	1.81E-04
19	GO:0043021: ribonucleoprotein complex binding	1.81E-04
20	GO:0016531: copper chaperone activity	3.05E-04
21	GO:0004148: dihydrolipoyl dehydrogenase activity	3.05E-04
22	GO:0080054: low-affinity nitrate transmembrane transporter activity	3.05E-04
23	GO:0004449: isocitrate dehydrogenase (NAD+) activity	4.41E-04
24	GO:0005524: ATP binding	5.44E-04
25	GO:0004029: aldehyde dehydrogenase (NAD) activity	9.07E-04
26	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	9.07E-04
27	GO:0030976: thiamine pyrophosphate binding	9.07E-04
28	GO:1990714: hydroxyproline O-galactosyltransferase activity	9.07E-04
29	GO:0008235: metalloexopeptidase activity	1.26E-03
30	GO:0004364: glutathione transferase activity	1.54E-03
31	GO:0003678: DNA helicase activity	1.87E-03
32	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	2.09E-03
33	GO:0004713: protein tyrosine kinase activity	2.32E-03
34	GO:0004568: chitinase activity	2.32E-03
35	GO:0001054: RNA polymerase I activity	2.56E-03
36	GO:0004177: aminopeptidase activity	2.56E-03
37	GO:0008378: galactosyltransferase activity	2.80E-03
38	GO:0005388: calcium-transporting ATPase activity	3.06E-03
39	GO:0005215: transporter activity	3.08E-03
40	GO:0016746: transferase activity, transferring acyl groups	3.12E-03
41	GO:0008061: chitin binding	3.59E-03
42	GO:0005528: FK506 binding	4.15E-03
43	GO:0004407: histone deacetylase activity	4.15E-03
44	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.86E-03
45	GO:0000166: nucleotide binding	5.00E-03
46	GO:0016301: kinase activity	1.04E-02
47	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.20E-02
48	GO:0015238: drug transmembrane transporter activity	1.24E-02
49	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.51E-02
50	GO:0042393: histone binding	1.55E-02
51	GO:0009055: electron carrier activity	1.59E-02
52	GO:0015293: symporter activity	1.84E-02
53	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.89E-02
54	GO:0051287: NAD binding	1.94E-02
55	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.10E-02
56	GO:0015035: protein disulfide oxidoreductase activity	2.75E-02
57	GO:0008026: ATP-dependent helicase activity	2.81E-02
58	GO:0004386: helicase activity	2.87E-02
59	GO:0004674: protein serine/threonine kinase activity	2.91E-02
60	GO:0016758: transferase activity, transferring hexosyl groups	3.10E-02
61	GO:0030246: carbohydrate binding	3.54E-02
62	GO:0015297: antiporter activity	3.85E-02

Rank	GO Term	Adjusted P value
1	GO:0005730: nucleolus	5.54E-07
2	GO:0070545: PeBoW complex	1.81E-04
3	GO:0005901: caveola	1.81E-04
4	GO:0005834: heterotrimeric G-protein complex	2.82E-04
5	GO:0016272: prefoldin complex	1.08E-03
6	GO:0030687: preribosome, large subunit precursor	1.26E-03
7	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.27E-03
8	GO:0005736: DNA-directed RNA polymerase I complex	1.87E-03
9	GO:0005739: mitochondrion	2.41E-03
10	GO:0005747: mitochondrial respiratory chain complex I	2.61E-03
11	GO:0005773: vacuole	3.00E-03
12	GO:0005758: mitochondrial intermembrane space	4.15E-03
13	GO:0045271: respiratory chain complex I	4.43E-03
14	GO:0005759: mitochondrial matrix	4.75E-03
15	GO:0005886: plasma membrane	1.01E-02
16	GO:0022625: cytosolic large ribosomal subunit	1.05E-02
17	GO:0005829: cytosol	1.33E-02
18	GO:0005774: vacuolar membrane	1.73E-02
19	GO:0031966: mitochondrial membrane	1.99E-02
20	GO:0005654: nucleoplasm	3.10E-02
21	GO:0009705: plant-type vacuole membrane	3.98E-02
22	GO:0046658: anchored component of plasma membrane	4.85E-02