Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G63880

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042906: xanthine transport0.00E+00
2GO:0044249: cellular biosynthetic process0.00E+00
3GO:0010730: negative regulation of hydrogen peroxide biosynthetic process0.00E+00
4GO:0005997: xylulose metabolic process0.00E+00
5GO:0009415: response to water3.03E-06
6GO:0009819: drought recovery1.70E-04
7GO:1990641: response to iron ion starvation2.04E-04
8GO:1902265: abscisic acid homeostasis2.04E-04
9GO:0007229: integrin-mediated signaling pathway2.04E-04
10GO:0030003: cellular cation homeostasis4.57E-04
11GO:0015857: uracil transport4.57E-04
12GO:0006101: citrate metabolic process4.57E-04
13GO:0009257: 10-formyltetrahydrofolate biosynthetic process4.57E-04
14GO:0015914: phospholipid transport4.57E-04
15GO:0015720: allantoin transport4.57E-04
16GO:0071705: nitrogen compound transport7.44E-04
17GO:0042344: indole glucosinolate catabolic process7.44E-04
18GO:0030029: actin filament-based process7.44E-04
19GO:0009269: response to desiccation1.01E-03
20GO:0015749: monosaccharide transport1.06E-03
21GO:0009113: purine nucleobase biosynthetic process1.06E-03
22GO:1901332: negative regulation of lateral root development1.06E-03
23GO:0019438: aromatic compound biosynthetic process1.06E-03
24GO:0071215: cellular response to abscisic acid stimulus1.20E-03
25GO:0051603: proteolysis involved in cellular protein catabolic process1.22E-03
26GO:0006970: response to osmotic stress1.36E-03
27GO:1902584: positive regulation of response to water deprivation1.41E-03
28GO:0006552: leucine catabolic process1.41E-03
29GO:0006646: phosphatidylethanolamine biosynthetic process1.41E-03
30GO:0010222: stem vascular tissue pattern formation1.41E-03
31GO:0009687: abscisic acid metabolic process1.41E-03
32GO:0015743: malate transport1.41E-03
33GO:0048544: recognition of pollen1.75E-03
34GO:0006656: phosphatidylcholine biosynthetic process1.80E-03
35GO:0043097: pyrimidine nucleoside salvage1.80E-03
36GO:0035556: intracellular signal transduction1.96E-03
37GO:0006635: fatty acid beta-oxidation2.01E-03
38GO:0042732: D-xylose metabolic process2.21E-03
39GO:0006206: pyrimidine nucleobase metabolic process2.21E-03
40GO:0000741: karyogamy2.21E-03
41GO:0009737: response to abscisic acid2.44E-03
42GO:0010286: heat acclimation2.58E-03
43GO:0071470: cellular response to osmotic stress2.66E-03
44GO:0019509: L-methionine salvage from methylthioadenosine2.66E-03
45GO:0045926: negative regulation of growth2.66E-03
46GO:0006694: steroid biosynthetic process2.66E-03
47GO:0006614: SRP-dependent cotranslational protein targeting to membrane3.13E-03
48GO:0009396: folic acid-containing compound biosynthetic process3.13E-03
49GO:0006333: chromatin assembly or disassembly3.13E-03
50GO:0010044: response to aluminum ion3.13E-03
51GO:0098869: cellular oxidant detoxification3.13E-03
52GO:0006605: protein targeting3.63E-03
53GO:0006102: isocitrate metabolic process3.63E-03
54GO:0009817: defense response to fungus, incompatible interaction3.76E-03
55GO:0001510: RNA methylation4.15E-03
56GO:0006811: ion transport4.15E-03
57GO:0006972: hyperosmotic response4.15E-03
58GO:0009631: cold acclimation4.35E-03
59GO:0006098: pentose-phosphate shunt4.70E-03
60GO:0046916: cellular transition metal ion homeostasis4.70E-03
61GO:0006099: tricarboxylic acid cycle4.98E-03
62GO:0035999: tetrahydrofolate interconversion5.27E-03
63GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.27E-03
64GO:0008202: steroid metabolic process5.27E-03
65GO:0006535: cysteine biosynthetic process from serine5.86E-03
66GO:0009414: response to water deprivation5.88E-03
67GO:0006979: response to oxidative stress6.21E-03
68GO:0006816: calcium ion transport6.48E-03
69GO:0009682: induced systemic resistance6.48E-03
70GO:0052544: defense response by callose deposition in cell wall6.48E-03
71GO:0010167: response to nitrate9.17E-03
72GO:0071732: cellular response to nitric oxide9.17E-03
73GO:0010030: positive regulation of seed germination9.17E-03
74GO:0009409: response to cold1.04E-02
75GO:2000377: regulation of reactive oxygen species metabolic process1.06E-02
76GO:0019344: cysteine biosynthetic process1.06E-02
77GO:0016575: histone deacetylation1.14E-02
78GO:0006874: cellular calcium ion homeostasis1.14E-02
79GO:0009695: jasmonic acid biosynthetic process1.14E-02
80GO:0055114: oxidation-reduction process1.18E-02
81GO:0071369: cellular response to ethylene stimulus1.38E-02
82GO:0006012: galactose metabolic process1.38E-02
83GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.55E-02
84GO:0006468: protein phosphorylation1.59E-02
85GO:0042631: cellular response to water deprivation1.64E-02
86GO:0000226: microtubule cytoskeleton organization1.64E-02
87GO:0042391: regulation of membrane potential1.64E-02
88GO:0080022: primary root development1.64E-02
89GO:0010051: xylem and phloem pattern formation1.64E-02
90GO:0071472: cellular response to salt stress1.73E-02
91GO:0010197: polar nucleus fusion1.73E-02
92GO:0046323: glucose import1.73E-02
93GO:0006814: sodium ion transport1.82E-02
94GO:0009651: response to salt stress1.82E-02
95GO:0006633: fatty acid biosynthetic process1.86E-02
96GO:0006413: translational initiation1.91E-02
97GO:0009749: response to glucose1.92E-02
98GO:0008654: phospholipid biosynthetic process1.92E-02
99GO:0007623: circadian rhythm2.05E-02
100GO:0042742: defense response to bacterium2.10E-02
101GO:0007165: signal transduction2.17E-02
102GO:0071281: cellular response to iron ion2.21E-02
103GO:0019760: glucosinolate metabolic process2.30E-02
104GO:0010468: regulation of gene expression2.44E-02
105GO:0009617: response to bacterium2.44E-02
106GO:0016126: sterol biosynthetic process2.61E-02
107GO:0009911: positive regulation of flower development2.61E-02
108GO:0009738: abscisic acid-activated signaling pathway2.71E-02
109GO:0010029: regulation of seed germination2.72E-02
110GO:0048573: photoperiodism, flowering2.94E-02
111GO:0006950: response to stress2.94E-02
112GO:0018298: protein-chromophore linkage3.16E-02
113GO:0010043: response to zinc ion3.50E-02
114GO:0009637: response to blue light3.74E-02
115GO:0030001: metal ion transport4.10E-02
116GO:0006511: ubiquitin-dependent protein catabolic process4.12E-02
117GO:0046777: protein autophosphorylation4.19E-02
118GO:0006897: endocytosis4.22E-02
119GO:0044550: secondary metabolite biosynthetic process4.26E-02
120GO:0042542: response to hydrogen peroxide4.35E-02
RankGO TermAdjusted P value
1GO:0042907: xanthine transmembrane transporter activity0.00E+00
2GO:0047787: delta4-3-oxosteroid 5beta-reductase activity0.00E+00
3GO:0009045: xylose isomerase activity0.00E+00
4GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity0.00E+00
5GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity0.00E+00
6GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
7GO:0016428: tRNA (cytosine-5-)-methyltransferase activity0.00E+00
8GO:0005272: sodium channel activity0.00E+00
9GO:0008692: 3-hydroxybutyryl-CoA epimerase activity2.04E-04
10GO:0046870: cadmium ion binding2.04E-04
11GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity2.04E-04
12GO:0004856: xylulokinase activity2.04E-04
13GO:0019707: protein-cysteine S-acyltransferase activity2.04E-04
14GO:0030275: LRR domain binding2.04E-04
15GO:0004485: methylcrotonoyl-CoA carboxylase activity2.04E-04
16GO:0009679: hexose:proton symporter activity2.04E-04
17GO:0035671: enone reductase activity2.04E-04
18GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity3.06E-04
19GO:0004477: methenyltetrahydrofolate cyclohydrolase activity4.57E-04
20GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity4.57E-04
21GO:0004839: ubiquitin activating enzyme activity4.57E-04
22GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity4.57E-04
23GO:0004329: formate-tetrahydrofolate ligase activity4.57E-04
24GO:0001047: core promoter binding4.57E-04
25GO:0032791: lead ion binding4.57E-04
26GO:0005274: allantoin uptake transmembrane transporter activity4.57E-04
27GO:0004609: phosphatidylserine decarboxylase activity4.57E-04
28GO:0003994: aconitate hydratase activity4.57E-04
29GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity4.57E-04
30GO:0005047: signal recognition particle binding7.44E-04
31GO:0017150: tRNA dihydrouridine synthase activity7.44E-04
32GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity7.44E-04
33GO:0004075: biotin carboxylase activity7.44E-04
34GO:0016301: kinase activity7.44E-04
35GO:0004180: carboxypeptidase activity7.44E-04
36GO:0048027: mRNA 5'-UTR binding1.06E-03
37GO:0004108: citrate (Si)-synthase activity1.06E-03
38GO:0030527: structural constituent of chromatin1.06E-03
39GO:0004165: dodecenoyl-CoA delta-isomerase activity1.06E-03
40GO:0004300: enoyl-CoA hydratase activity1.06E-03
41GO:0015210: uracil transmembrane transporter activity1.41E-03
42GO:0008526: phosphatidylinositol transporter activity1.41E-03
43GO:0005253: anion channel activity1.41E-03
44GO:0015145: monosaccharide transmembrane transporter activity1.80E-03
45GO:0008641: small protein activating enzyme activity1.80E-03
46GO:0016773: phosphotransferase activity, alcohol group as acceptor1.80E-03
47GO:0045300: acyl-[acyl-carrier-protein] desaturase activity1.80E-03
48GO:0010294: abscisic acid glucosyltransferase activity1.80E-03
49GO:0005524: ATP binding1.99E-03
50GO:0004197: cysteine-type endopeptidase activity2.14E-03
51GO:0000293: ferric-chelate reductase activity2.21E-03
52GO:0019137: thioglucosidase activity2.21E-03
53GO:0004029: aldehyde dehydrogenase (NAD) activity2.21E-03
54GO:0070300: phosphatidic acid binding2.66E-03
55GO:0005261: cation channel activity2.66E-03
56GO:0004849: uridine kinase activity2.66E-03
57GO:0004602: glutathione peroxidase activity2.66E-03
58GO:0004124: cysteine synthase activity2.66E-03
59GO:0009881: photoreceptor activity3.13E-03
60GO:0015140: malate transmembrane transporter activity3.13E-03
61GO:0005507: copper ion binding3.31E-03
62GO:0004034: aldose 1-epimerase activity3.63E-03
63GO:0004869: cysteine-type endopeptidase inhibitor activity3.63E-03
64GO:0004525: ribonuclease III activity3.63E-03
65GO:0005267: potassium channel activity4.15E-03
66GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)4.15E-03
67GO:0050897: cobalt ion binding4.35E-03
68GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity4.70E-03
69GO:0005509: calcium ion binding5.32E-03
70GO:0004674: protein serine/threonine kinase activity5.58E-03
71GO:0008171: O-methyltransferase activity5.86E-03
72GO:0005262: calcium channel activity7.78E-03
73GO:0008234: cysteine-type peptidase activity9.16E-03
74GO:0005217: intracellular ligand-gated ion channel activity9.17E-03
75GO:0004970: ionotropic glutamate receptor activity9.17E-03
76GO:0030552: cAMP binding9.17E-03
77GO:0030553: cGMP binding9.17E-03
78GO:0004407: histone deacetylase activity1.06E-02
79GO:0043424: protein histidine kinase binding1.14E-02
80GO:0005216: ion channel activity1.14E-02
81GO:0004707: MAP kinase activity1.22E-02
82GO:0019706: protein-cysteine S-palmitoyltransferase activity1.22E-02
83GO:0030551: cyclic nucleotide binding1.64E-02
84GO:0005249: voltage-gated potassium channel activity1.64E-02
85GO:0015144: carbohydrate transmembrane transporter activity1.77E-02
86GO:0016853: isomerase activity1.82E-02
87GO:0005351: sugar:proton symporter activity2.00E-02
88GO:0003743: translation initiation factor activity2.39E-02
89GO:0005200: structural constituent of cytoskeleton2.41E-02
90GO:0003824: catalytic activity2.41E-02
91GO:0102483: scopolin beta-glucosidase activity2.94E-02
92GO:0030247: polysaccharide binding2.94E-02
93GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.05E-02
94GO:0008236: serine-type peptidase activity3.05E-02
95GO:0005096: GTPase activator activity3.27E-02
96GO:0004672: protein kinase activity3.69E-02
97GO:0008422: beta-glucosidase activity3.98E-02
98GO:0004712: protein serine/threonine/tyrosine kinase activity3.98E-02
99GO:0030246: carbohydrate binding4.07E-02
100GO:0051539: 4 iron, 4 sulfur cluster binding4.10E-02
RankGO TermAdjusted P value
1GO:0005785: signal recognition particle receptor complex0.00E+00
2GO:0005851: eukaryotic translation initiation factor 2B complex7.23E-05
3GO:0016021: integral component of membrane4.19E-04
4GO:0005764: lysosome6.10E-04
5GO:0000323: lytic vacuole1.06E-03
6GO:0005829: cytosol1.75E-03
7GO:0005886: plasma membrane1.96E-03
8GO:0030131: clathrin adaptor complex3.63E-03
9GO:0005786: signal recognition particle, endoplasmic reticulum targeting4.15E-03
10GO:0030125: clathrin vesicle coat5.86E-03
11GO:0005773: vacuole6.66E-03
12GO:0005905: clathrin-coated pit1.22E-02
13GO:0005759: mitochondrial matrix1.86E-02
14GO:0031965: nuclear membrane1.92E-02
15GO:0009705: plant-type vacuole membrane2.05E-02
16GO:0000785: chromatin2.11E-02
17GO:0005737: cytoplasm2.11E-02
18GO:0005615: extracellular space2.29E-02
19GO:0005783: endoplasmic reticulum3.03E-02
20GO:0005777: peroxisome3.35E-02
21GO:0005794: Golgi apparatus4.84E-02
Gene type



Gene DE type