co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G63180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002184: cytoplasmic translational termination	0.00E+00
2	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
3	GO:0033494: ferulate metabolic process	0.00E+00
4	GO:0016553: base conversion or substitution editing	0.00E+00
5	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
6	GO:0042493: response to drug	0.00E+00
7	GO:0006412: translation	1.81E-21
8	GO:0042254: ribosome biogenesis	5.89E-13
9	GO:0032544: plastid translation	5.88E-12
10	GO:0009735: response to cytokinin	6.35E-09
11	GO:0015979: photosynthesis	2.39E-08
12	GO:0015976: carbon utilization	5.77E-05
13	GO:0042742: defense response to bacterium	1.16E-04
14	GO:0045454: cell redox homeostasis	2.53E-04
15	GO:0000413: protein peptidyl-prolyl isomerization	2.60E-04
16	GO:0071588: hydrogen peroxide mediated signaling pathway	2.97E-04
17	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	2.97E-04
18	GO:0060627: regulation of vesicle-mediated transport	2.97E-04
19	GO:0043489: RNA stabilization	2.97E-04
20	GO:0071277: cellular response to calcium ion	2.97E-04
21	GO:1904966: positive regulation of vitamin E biosynthetic process	2.97E-04
22	GO:1904964: positive regulation of phytol biosynthetic process	2.97E-04
23	GO:0042371: vitamin K biosynthetic process	2.97E-04
24	GO:0010206: photosystem II repair	4.41E-04
25	GO:0010027: thylakoid membrane organization	6.13E-04
26	GO:0010024: phytochromobilin biosynthetic process	6.50E-04
27	GO:1902326: positive regulation of chlorophyll biosynthetic process	6.50E-04
28	GO:0044208: 'de novo' AMP biosynthetic process	6.50E-04
29	GO:0001736: establishment of planar polarity	6.50E-04
30	GO:0009773: photosynthetic electron transport in photosystem I	7.02E-04
31	GO:0018119: peptidyl-cysteine S-nitrosylation	7.02E-04
32	GO:0015995: chlorophyll biosynthetic process	7.54E-04
33	GO:0009817: defense response to fungus, incompatible interaction	8.58E-04
34	GO:0009725: response to hormone	9.08E-04
35	GO:0010143: cutin biosynthetic process	1.02E-03
36	GO:0010207: photosystem II assembly	1.02E-03
37	GO:0006788: heme oxidation	1.05E-03
38	GO:0006954: inflammatory response	1.05E-03
39	GO:0006518: peptide metabolic process	1.05E-03
40	GO:0015840: urea transport	1.05E-03
41	GO:0071492: cellular response to UV-A	1.05E-03
42	GO:0006696: ergosterol biosynthetic process	1.05E-03
43	GO:0006869: lipid transport	1.37E-03
44	GO:0071484: cellular response to light intensity	1.51E-03
45	GO:0009650: UV protection	1.51E-03
46	GO:0006424: glutamyl-tRNA aminoacylation	1.51E-03
47	GO:0046739: transport of virus in multicellular host	1.51E-03
48	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	1.51E-03
49	GO:0071486: cellular response to high light intensity	2.02E-03
50	GO:2000122: negative regulation of stomatal complex development	2.02E-03
51	GO:0010037: response to carbon dioxide	2.02E-03
52	GO:0009956: radial pattern formation	2.02E-03
53	GO:0009306: protein secretion	2.20E-03
54	GO:0042335: cuticle development	2.57E-03
55	GO:0032543: mitochondrial translation	2.58E-03
56	GO:0031365: N-terminal protein amino acid modification	2.58E-03
57	GO:0006461: protein complex assembly	2.58E-03
58	GO:0009658: chloroplast organization	2.77E-03
59	GO:0009409: response to cold	3.00E-03
60	GO:0042549: photosystem II stabilization	3.19E-03
61	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.19E-03
62	GO:0009955: adaxial/abaxial pattern specification	3.84E-03
63	GO:0042372: phylloquinone biosynthetic process	3.84E-03
64	GO:1901259: chloroplast rRNA processing	3.84E-03
65	GO:0006694: steroid biosynthetic process	3.84E-03
66	GO:0010019: chloroplast-nucleus signaling pathway	3.84E-03
67	GO:0048444: floral organ morphogenesis	3.84E-03
68	GO:0010555: response to mannitol	3.84E-03
69	GO:0009395: phospholipid catabolic process	4.53E-03
70	GO:0009772: photosynthetic electron transport in photosystem II	4.53E-03
71	GO:0010196: nonphotochemical quenching	4.53E-03
72	GO:0009642: response to light intensity	5.26E-03
73	GO:0030091: protein repair	5.26E-03
74	GO:0042255: ribosome assembly	5.26E-03
75	GO:0046620: regulation of organ growth	5.26E-03
76	GO:0006353: DNA-templated transcription, termination	5.26E-03
77	GO:0006605: protein targeting	5.26E-03
78	GO:0009704: de-etiolation	5.26E-03
79	GO:0000028: ribosomal small subunit assembly	5.26E-03
80	GO:0010497: plasmodesmata-mediated intercellular transport	6.03E-03
81	GO:0009657: plastid organization	6.03E-03
82	GO:0006526: arginine biosynthetic process	6.03E-03
83	GO:0009808: lignin metabolic process	6.03E-03
84	GO:0018298: protein-chromophore linkage	6.45E-03
85	GO:0016042: lipid catabolic process	6.65E-03
86	GO:0090333: regulation of stomatal closure	6.83E-03
87	GO:0006783: heme biosynthetic process	6.83E-03
88	GO:0006189: 'de novo' IMP biosynthetic process	6.83E-03
89	GO:0045490: pectin catabolic process	7.26E-03
90	GO:0009631: cold acclimation	7.46E-03
91	GO:0010205: photoinhibition	7.67E-03
92	GO:0006779: porphyrin-containing compound biosynthetic process	7.67E-03
93	GO:0006949: syncytium formation	8.55E-03
94	GO:0006782: protoporphyrinogen IX biosynthetic process	8.55E-03
95	GO:0048829: root cap development	8.55E-03
96	GO:0034599: cellular response to oxidative stress	8.56E-03
97	GO:0006839: mitochondrial transport	9.33E-03
98	GO:0010015: root morphogenesis	9.46E-03
99	GO:0043085: positive regulation of catalytic activity	9.46E-03
100	GO:0048765: root hair cell differentiation	9.46E-03
101	GO:0016024: CDP-diacylglycerol biosynthetic process	1.04E-02
102	GO:0006810: transport	1.06E-02
103	GO:0009926: auxin polar transport	1.06E-02
104	GO:0006006: glucose metabolic process	1.14E-02
105	GO:0009934: regulation of meristem structural organization	1.24E-02
106	GO:0009933: meristem structural organization	1.24E-02
107	GO:0019253: reductive pentose-phosphate cycle	1.24E-02
108	GO:0006833: water transport	1.45E-02
109	GO:0019762: glucosinolate catabolic process	1.45E-02
110	GO:0006636: unsaturated fatty acid biosynthetic process	1.45E-02
111	GO:0019344: cysteine biosynthetic process	1.56E-02
112	GO:0000027: ribosomal large subunit assembly	1.56E-02
113	GO:0051302: regulation of cell division	1.68E-02
114	GO:0009768: photosynthesis, light harvesting in photosystem I	1.68E-02
115	GO:0061077: chaperone-mediated protein folding	1.79E-02
116	GO:0031408: oxylipin biosynthetic process	1.79E-02
117	GO:0003333: amino acid transmembrane transport	1.79E-02
118	GO:0030245: cellulose catabolic process	1.91E-02
119	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.03E-02
120	GO:0009411: response to UV	2.03E-02
121	GO:0019722: calcium-mediated signaling	2.16E-02
122	GO:0055085: transmembrane transport	2.36E-02
123	GO:0008033: tRNA processing	2.42E-02
124	GO:0009958: positive gravitropism	2.55E-02
125	GO:0006520: cellular amino acid metabolic process	2.55E-02
126	GO:0010305: leaf vascular tissue pattern formation	2.55E-02
127	GO:0006662: glycerol ether metabolic process	2.55E-02
128	GO:0015986: ATP synthesis coupled proton transport	2.68E-02
129	GO:0016132: brassinosteroid biosynthetic process	2.96E-02
130	GO:0002229: defense response to oomycetes	2.96E-02
131	GO:0000302: response to reactive oxygen species	2.96E-02
132	GO:0009790: embryo development	2.98E-02
133	GO:0032502: developmental process	3.10E-02
134	GO:0009630: gravitropism	3.10E-02
135	GO:0006633: fatty acid biosynthetic process	3.20E-02
136	GO:0009828: plant-type cell wall loosening	3.39E-02
137	GO:0007267: cell-cell signaling	3.55E-02
138	GO:0009451: RNA modification	3.60E-02
139	GO:0010411: xyloglucan metabolic process	4.32E-02
140	GO:0016311: dephosphorylation	4.48E-02
141	GO:0006979: response to oxidative stress	4.70E-02
142	GO:0010311: lateral root formation	4.81E-02
143	GO:0009834: plant-type secondary cell wall biogenesis	4.98E-02
144	GO:0009407: toxin catabolic process	4.98E-02
145	GO:0010218: response to far red light	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0050614: delta24-sterol reductase activity	0.00E+00
2	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
3	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
4	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	0.00E+00
5	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
6	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
7	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
8	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
9	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
10	GO:0019843: rRNA binding	1.09E-28
11	GO:0003735: structural constituent of ribosome	5.38E-24
12	GO:0051920: peroxiredoxin activity	2.27E-08
13	GO:0016209: antioxidant activity	8.09E-08
14	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	4.02E-06
15	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.44E-05
16	GO:0016788: hydrolase activity, acting on ester bonds	1.06E-04
17	GO:0030570: pectate lyase activity	1.85E-04
18	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.84E-04
19	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	2.97E-04
20	GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity	2.97E-04
21	GO:0070626: (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity	2.97E-04
22	GO:0004655: porphobilinogen synthase activity	2.97E-04
23	GO:0015200: methylammonium transmembrane transporter activity	2.97E-04
24	GO:0004018: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	2.97E-04
25	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	6.50E-04
26	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	6.50E-04
27	GO:0016168: chlorophyll binding	6.58E-04
28	GO:0004089: carbonate dehydratase activity	9.08E-04
29	GO:0052689: carboxylic ester hydrolase activity	1.02E-03
30	GO:0008266: poly(U) RNA binding	1.02E-03
31	GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity	1.05E-03
32	GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity	1.05E-03
33	GO:0050734: hydroxycinnamoyltransferase activity	1.05E-03
34	GO:0004148: dihydrolipoyl dehydrogenase activity	1.05E-03
35	GO:0030267: glyoxylate reductase (NADP) activity	1.05E-03
36	GO:0008097: 5S rRNA binding	1.51E-03
37	GO:0001872: (1->3)-beta-D-glucan binding	1.51E-03
38	GO:0016851: magnesium chelatase activity	1.51E-03
39	GO:0043023: ribosomal large subunit binding	1.51E-03
40	GO:0022891: substrate-specific transmembrane transporter activity	2.02E-03
41	GO:0010011: auxin binding	2.02E-03
42	GO:0016836: hydro-lyase activity	2.02E-03
43	GO:0010328: auxin influx transmembrane transporter activity	2.02E-03
44	GO:0043495: protein anchor	2.02E-03
45	GO:0004392: heme oxygenase (decyclizing) activity	2.02E-03
46	GO:0015204: urea transmembrane transporter activity	2.02E-03
47	GO:0004040: amidase activity	2.58E-03
48	GO:0004601: peroxidase activity	2.77E-03
49	GO:0008289: lipid binding	3.02E-03
50	GO:0004130: cytochrome-c peroxidase activity	3.19E-03
51	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.19E-03
52	GO:0016208: AMP binding	3.19E-03
53	GO:0016688: L-ascorbate peroxidase activity	3.19E-03
54	GO:0008200: ion channel inhibitor activity	3.19E-03
55	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	3.19E-03
56	GO:0008519: ammonium transmembrane transporter activity	3.19E-03
57	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.84E-03
58	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.84E-03
59	GO:0008235: metalloexopeptidase activity	4.53E-03
60	GO:0019899: enzyme binding	4.53E-03
61	GO:0030674: protein binding, bridging	5.26E-03
62	GO:0004033: aldo-keto reductase (NADP) activity	5.26E-03
63	GO:0052747: sinapyl alcohol dehydrogenase activity	5.26E-03
64	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	6.03E-03
65	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	6.45E-03
66	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	7.52E-03
67	GO:0047617: acyl-CoA hydrolase activity	7.67E-03
68	GO:0008047: enzyme activator activity	8.55E-03
69	GO:0003993: acid phosphatase activity	8.56E-03
70	GO:0004177: aminopeptidase activity	9.46E-03
71	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.04E-02
72	GO:0051537: 2 iron, 2 sulfur cluster binding	1.14E-02
73	GO:0031072: heat shock protein binding	1.14E-02
74	GO:0051287: NAD binding	1.28E-02
75	GO:0008146: sulfotransferase activity	1.34E-02
76	GO:0031409: pigment binding	1.45E-02
77	GO:0003690: double-stranded DNA binding	1.48E-02
78	GO:0005528: FK506 binding	1.56E-02
79	GO:0043424: protein histidine kinase binding	1.68E-02
80	GO:0008810: cellulase activity	2.03E-02
81	GO:0003727: single-stranded RNA binding	2.16E-02
82	GO:0047134: protein-disulfide reductase activity	2.29E-02
83	GO:0008080: N-acetyltransferase activity	2.55E-02
84	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	2.55E-02
85	GO:0004791: thioredoxin-disulfide reductase activity	2.68E-02
86	GO:0016829: lyase activity	2.76E-02
87	GO:0004872: receptor activity	2.82E-02
88	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.96E-02
89	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.25E-02
90	GO:0016791: phosphatase activity	3.39E-02
91	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.55E-02
92	GO:0015250: water channel activity	3.85E-02
93	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.32E-02
94	GO:0102483: scopolin beta-glucosidase activity	4.32E-02
95	GO:0030247: polysaccharide binding	4.32E-02
96	GO:0008236: serine-type peptidase activity	4.48E-02
97	GO:0004222: metalloendopeptidase activity	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	0.00E+00
2	GO:0044391: ribosomal subunit	0.00E+00
3	GO:0009547: plastid ribosome	0.00E+00
4	GO:0009507: chloroplast	2.64E-49
5	GO:0009570: chloroplast stroma	1.24E-44
6	GO:0009941: chloroplast envelope	6.93E-39
7	GO:0009579: thylakoid	3.80E-27
8	GO:0009535: chloroplast thylakoid membrane	1.02E-25
9	GO:0005840: ribosome	6.58E-24
10	GO:0009534: chloroplast thylakoid	4.73E-15
11	GO:0009543: chloroplast thylakoid lumen	3.56E-12
12	GO:0031977: thylakoid lumen	2.66E-11
13	GO:0048046: apoplast	4.15E-07
14	GO:0030095: chloroplast photosystem II	1.79E-06
15	GO:0016020: membrane	1.56E-05
16	GO:0000311: plastid large ribosomal subunit	4.33E-05
17	GO:0010319: stromule	4.46E-05
18	GO:0015934: large ribosomal subunit	1.20E-04
19	GO:0031225: anchored component of membrane	2.34E-04
20	GO:0009533: chloroplast stromal thylakoid	2.36E-04
21	GO:0005618: cell wall	2.42E-04
22	GO:0009523: photosystem II	3.49E-04
23	GO:0046658: anchored component of plasma membrane	4.41E-04
24	GO:0009505: plant-type cell wall	7.99E-04
25	GO:0000312: plastid small ribosomal subunit	1.02E-03
26	GO:0010007: magnesium chelatase complex	1.05E-03
27	GO:0009654: photosystem II oxygen evolving complex	1.55E-03
28	GO:0042651: thylakoid membrane	1.55E-03
29	GO:0015935: small ribosomal subunit	1.70E-03
30	GO:0009536: plastid	2.41E-03
31	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	3.19E-03
32	GO:0019898: extrinsic component of membrane	3.20E-03
33	GO:0031969: chloroplast membrane	3.84E-03
34	GO:0022626: cytosolic ribosome	4.29E-03
35	GO:0010287: plastoglobule	4.50E-03
36	GO:0042807: central vacuole	4.53E-03
37	GO:0009986: cell surface	4.53E-03
38	GO:0000326: protein storage vacuole	6.03E-03
39	GO:0005763: mitochondrial small ribosomal subunit	6.83E-03
40	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	6.83E-03
41	GO:0008180: COP9 signalosome	6.83E-03
42	GO:0031012: extracellular matrix	1.14E-02
43	GO:0005576: extracellular region	1.22E-02
44	GO:0030076: light-harvesting complex	1.34E-02
45	GO:0005875: microtubule associated complex	1.45E-02
46	GO:0022625: cytosolic large ribosomal subunit	1.78E-02
47	GO:0009522: photosystem I	2.68E-02
48	GO:0009295: nucleoid	3.55E-02
49	GO:0005778: peroxisomal membrane	3.55E-02
50	GO:0030529: intracellular ribonucleoprotein complex	3.85E-02
51	GO:0022627: cytosolic small ribosomal subunit	4.64E-02
52	GO:0019005: SCF ubiquitin ligase complex	4.65E-02