co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G63040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019370: leukotriene biosynthetic process	0.00E+00
2	GO:0009946: proximal/distal axis specification	0.00E+00
3	GO:0019510: S-adenosylhomocysteine catabolic process	3.00E-05
4	GO:0033353: S-adenosylmethionine cycle	7.58E-05
5	GO:0015712: hexose phosphate transport	7.58E-05
6	GO:0035436: triose phosphate transmembrane transport	1.32E-04
7	GO:0010338: leaf formation	1.32E-04
8	GO:2000082: regulation of L-ascorbic acid biosynthetic process	1.32E-04
9	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.97E-04
10	GO:0006546: glycine catabolic process	2.67E-04
11	GO:0009765: photosynthesis, light harvesting	2.67E-04
12	GO:0045088: regulation of innate immune response	2.67E-04
13	GO:0015713: phosphoglycerate transport	2.67E-04
14	GO:0016123: xanthophyll biosynthetic process	3.42E-04
15	GO:0016120: carotene biosynthetic process	3.42E-04
16	GO:0009094: L-phenylalanine biosynthetic process	5.02E-04
17	GO:0048589: developmental growth	8.63E-04
18	GO:0008356: asymmetric cell division	9.61E-04
19	GO:0019684: photosynthesis, light reaction	1.16E-03
20	GO:0009767: photosynthetic electron transport chain	1.38E-03
21	GO:0009739: response to gibberellin	1.79E-03
22	GO:0009944: polarity specification of adaxial/abaxial axis	1.86E-03
23	GO:0007010: cytoskeleton organization	1.86E-03
24	GO:0010026: trichome differentiation	1.98E-03
25	GO:0080092: regulation of pollen tube growth	2.25E-03
26	GO:0006730: one-carbon metabolic process	2.25E-03
27	GO:0010091: trichome branching	2.52E-03
28	GO:0006284: base-excision repair	2.52E-03
29	GO:0016117: carotenoid biosynthetic process	2.66E-03
30	GO:0048544: recognition of pollen	3.09E-03
31	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.15E-03
32	GO:0007264: small GTPase mediated signal transduction	3.55E-03
33	GO:0045454: cell redox homeostasis	3.63E-03
34	GO:0009615: response to virus	4.36E-03
35	GO:0006281: DNA repair	4.47E-03
36	GO:0046686: response to cadmium ion	4.65E-03
37	GO:0018298: protein-chromophore linkage	5.23E-03
38	GO:0009817: defense response to fungus, incompatible interaction	5.23E-03
39	GO:0048767: root hair elongation	5.41E-03
40	GO:0009407: toxin catabolic process	5.60E-03
41	GO:0034599: cellular response to oxidative stress	6.35E-03
42	GO:0009416: response to light stimulus	7.91E-03
43	GO:0009636: response to toxic substance	7.96E-03
44	GO:0009965: leaf morphogenesis	7.96E-03
45	GO:0009740: gibberellic acid mediated signaling pathway	1.11E-02
46	GO:0006810: transport	2.36E-02
47	GO:0009860: pollen tube growth	2.45E-02
48	GO:0045892: negative regulation of transcription, DNA-templated	3.11E-02
49	GO:0006869: lipid transport	3.29E-02
50	GO:0006468: protein phosphorylation	3.52E-02
51	GO:0009751: response to salicylic acid	3.54E-02
52	GO:0006629: lipid metabolic process	3.58E-02
53	GO:0009753: response to jasmonic acid	3.76E-02
54	GO:0006357: regulation of transcription from RNA polymerase II promoter	4.37E-02
55	GO:0006508: proteolysis	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0004463: leukotriene-A4 hydrolase activity	0.00E+00
2	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
3	GO:0004013: adenosylhomocysteinase activity	3.00E-05
4	GO:0004047: aminomethyltransferase activity	7.58E-05
5	GO:0071917: triose-phosphate transmembrane transporter activity	1.32E-04
6	GO:0003913: DNA photolyase activity	1.32E-04
7	GO:0004148: dihydrolipoyl dehydrogenase activity	1.32E-04
8	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	2.67E-04
9	GO:0015120: phosphoglycerate transmembrane transporter activity	2.67E-04
10	GO:0047769: arogenate dehydratase activity	2.67E-04
11	GO:0004664: prephenate dehydratase activity	2.67E-04
12	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.67E-04
13	GO:0008725: DNA-3-methyladenine glycosylase activity	3.42E-04
14	GO:0008374: O-acyltransferase activity	3.42E-04
15	GO:0080030: methyl indole-3-acetate esterase activity	4.20E-04
16	GO:0051920: peroxiredoxin activity	5.02E-04
17	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	5.02E-04
18	GO:0043295: glutathione binding	5.88E-04
19	GO:0009881: photoreceptor activity	5.88E-04
20	GO:0016209: antioxidant activity	6.76E-04
21	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.16E-03
22	GO:0004565: beta-galactosidase activity	1.38E-03
23	GO:0016740: transferase activity	1.41E-03
24	GO:0005355: glucose transmembrane transporter activity	3.09E-03
25	GO:0048038: quinone binding	3.40E-03
26	GO:0005200: structural constituent of cytoskeleton	4.03E-03
27	GO:0008483: transaminase activity	4.03E-03
28	GO:0016597: amino acid binding	4.20E-03
29	GO:0050897: cobalt ion binding	5.78E-03
30	GO:0004364: glutathione transferase activity	7.14E-03
31	GO:0051287: NAD binding	8.38E-03
32	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.04E-02
33	GO:0030246: carbohydrate binding	1.07E-02
34	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.38E-02
35	GO:0004252: serine-type endopeptidase activity	1.46E-02
36	GO:0005509: calcium ion binding	1.48E-02
37	GO:0015297: antiporter activity	1.65E-02
38	GO:0004674: protein serine/threonine kinase activity	2.00E-02
39	GO:0004601: peroxidase activity	2.32E-02
40	GO:0016788: hydrolase activity, acting on ester bonds	2.36E-02
41	GO:0004672: protein kinase activity	2.36E-02
42	GO:0050660: flavin adenine dinucleotide binding	2.58E-02
43	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.08E-02
44	GO:0042803: protein homodimerization activity	3.18E-02
45	GO:0004871: signal transducer activity	3.18E-02
46	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.32E-02
47	GO:0003924: GTPase activity	3.58E-02
48	GO:0008289: lipid binding	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0009344: nitrite reductase complex [NAD(P)H]	3.00E-05
2	GO:0000793: condensed chromosome	4.20E-04
3	GO:0009533: chloroplast stromal thylakoid	5.88E-04
4	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	8.63E-04
5	GO:0016324: apical plasma membrane	1.06E-03
6	GO:0009543: chloroplast thylakoid lumen	1.18E-03
7	GO:0009534: chloroplast thylakoid	1.39E-03
8	GO:0030095: chloroplast photosystem II	1.50E-03
9	GO:0031225: anchored component of membrane	1.91E-03
10	GO:0009654: photosystem II oxygen evolving complex	1.98E-03
11	GO:0005886: plasma membrane	2.16E-03
12	GO:0031969: chloroplast membrane	3.04E-03
13	GO:0019898: extrinsic component of membrane	3.24E-03
14	GO:0009941: chloroplast envelope	4.37E-03
15	GO:0005773: vacuole	5.26E-03
16	GO:0009535: chloroplast thylakoid membrane	7.38E-03
17	GO:0005856: cytoskeleton	7.96E-03
18	GO:0005747: mitochondrial respiratory chain complex I	1.04E-02
19	GO:0010287: plastoglobule	1.31E-02
20	GO:0048046: apoplast	1.37E-02
21	GO:0005759: mitochondrial matrix	1.59E-02
22	GO:0009505: plant-type cell wall	2.02E-02
23	GO:0009507: chloroplast	2.17E-02