co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G62620

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042430: indole-containing compound metabolic process	0.00E+00
2	GO:0030149: sphingolipid catabolic process	0.00E+00
3	GO:0071433: cell wall repair	0.00E+00
4	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
5	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
6	GO:0046686: response to cadmium ion	2.89E-07
7	GO:0001676: long-chain fatty acid metabolic process	5.42E-06
8	GO:0006099: tricarboxylic acid cycle	9.99E-06
9	GO:0006102: isocitrate metabolic process	6.41E-05
10	GO:0045454: cell redox homeostasis	7.73E-05
11	GO:0022900: electron transport chain	8.11E-05
12	GO:0010450: inflorescence meristem growth	1.08E-04
13	GO:0051245: negative regulation of cellular defense response	1.08E-04
14	GO:0009609: response to symbiotic bacterium	1.08E-04
15	GO:0055081: anion homeostasis	1.08E-04
16	GO:0009270: response to humidity	1.08E-04
17	GO:0048448: stamen morphogenesis	1.08E-04
18	GO:0006511: ubiquitin-dependent protein catabolic process	1.14E-04
19	GO:0043069: negative regulation of programmed cell death	1.44E-04
20	GO:0009617: response to bacterium	2.04E-04
21	GO:0048833: specification of floral organ number	2.52E-04
22	GO:0031349: positive regulation of defense response	2.52E-04
23	GO:0019752: carboxylic acid metabolic process	2.52E-04
24	GO:0019725: cellular homeostasis	2.52E-04
25	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	2.52E-04
26	GO:0070588: calcium ion transmembrane transport	2.87E-04
27	GO:0071494: cellular response to UV-C	4.19E-04
28	GO:0045039: protein import into mitochondrial inner membrane	4.19E-04
29	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	4.19E-04
30	GO:0045793: positive regulation of cell size	4.19E-04
31	GO:0072661: protein targeting to plasma membrane	4.19E-04
32	GO:0010186: positive regulation of cellular defense response	4.19E-04
33	GO:0009409: response to cold	5.29E-04
34	GO:0043207: response to external biotic stimulus	6.01E-04
35	GO:0010148: transpiration	6.01E-04
36	GO:0006612: protein targeting to membrane	6.01E-04
37	GO:0019438: aromatic compound biosynthetic process	6.01E-04
38	GO:0015986: ATP synthesis coupled proton transport	7.52E-04
39	GO:0060548: negative regulation of cell death	7.98E-04
40	GO:0045727: positive regulation of translation	7.98E-04
41	GO:0010363: regulation of plant-type hypersensitive response	7.98E-04
42	GO:0051205: protein insertion into membrane	7.98E-04
43	GO:0010107: potassium ion import	7.98E-04
44	GO:0006878: cellular copper ion homeostasis	7.98E-04
45	GO:0010193: response to ozone	8.59E-04
46	GO:0032502: developmental process	9.14E-04
47	GO:0030163: protein catabolic process	9.72E-04
48	GO:0031365: N-terminal protein amino acid modification	1.01E-03
49	GO:0006461: protein complex assembly	1.01E-03
50	GO:0009228: thiamine biosynthetic process	1.23E-03
51	GO:0009627: systemic acquired resistance	1.36E-03
52	GO:2000067: regulation of root morphogenesis	1.47E-03
53	GO:0042026: protein refolding	1.47E-03
54	GO:0006458: 'de novo' protein folding	1.47E-03
55	GO:0010555: response to mannitol	1.47E-03
56	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.73E-03
57	GO:0009610: response to symbiotic fungus	1.73E-03
58	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.00E-03
59	GO:0006605: protein targeting	2.00E-03
60	GO:0050821: protein stabilization	2.00E-03
61	GO:0031540: regulation of anthocyanin biosynthetic process	2.00E-03
62	GO:0009880: embryonic pattern specification	2.28E-03
63	GO:0007186: G-protein coupled receptor signaling pathway	2.28E-03
64	GO:0006631: fatty acid metabolic process	2.36E-03
65	GO:0051707: response to other organism	2.56E-03
66	GO:0046685: response to arsenic-containing substance	2.57E-03
67	GO:0009051: pentose-phosphate shunt, oxidative branch	2.57E-03
68	GO:0006754: ATP biosynthetic process	2.57E-03
69	GO:0043067: regulation of programmed cell death	2.88E-03
70	GO:0009651: response to salt stress	3.18E-03
71	GO:0009750: response to fructose	3.53E-03
72	GO:0016485: protein processing	3.53E-03
73	GO:0010224: response to UV-B	3.55E-03
74	GO:0015706: nitrate transport	3.87E-03
75	GO:0006006: glucose metabolic process	4.23E-03
76	GO:0009626: plant-type hypersensitive response	4.31E-03
77	GO:0009620: response to fungus	4.44E-03
78	GO:0009266: response to temperature stimulus	4.59E-03
79	GO:0009737: response to abscisic acid	4.82E-03
80	GO:0010167: response to nitrate	4.96E-03
81	GO:0046688: response to copper ion	4.96E-03
82	GO:0034976: response to endoplasmic reticulum stress	5.35E-03
83	GO:0042742: defense response to bacterium	5.49E-03
84	GO:0006979: response to oxidative stress	5.55E-03
85	GO:0000027: ribosomal large subunit assembly	5.75E-03
86	GO:0009863: salicylic acid mediated signaling pathway	5.75E-03
87	GO:0006825: copper ion transport	6.15E-03
88	GO:0006334: nucleosome assembly	6.56E-03
89	GO:0061077: chaperone-mediated protein folding	6.56E-03
90	GO:0048278: vesicle docking	6.56E-03
91	GO:0016226: iron-sulfur cluster assembly	6.99E-03
92	GO:0007005: mitochondrion organization	6.99E-03
93	GO:0031348: negative regulation of defense response	6.99E-03
94	GO:0019722: calcium-mediated signaling	7.87E-03
95	GO:0010118: stomatal movement	8.79E-03
96	GO:0006520: cellular amino acid metabolic process	9.26E-03
97	GO:0061025: membrane fusion	9.74E-03
98	GO:0009749: response to glucose	1.02E-02
99	GO:0007264: small GTPase mediated signal transduction	1.12E-02
100	GO:0031047: gene silencing by RNA	1.12E-02
101	GO:0010286: heat acclimation	1.28E-02
102	GO:0001666: response to hypoxia	1.39E-02
103	GO:0009615: response to virus	1.39E-02
104	GO:0009816: defense response to bacterium, incompatible interaction	1.45E-02
105	GO:0042128: nitrate assimilation	1.51E-02
106	GO:0006906: vesicle fusion	1.51E-02
107	GO:0006974: cellular response to DNA damage stimulus	1.51E-02
108	GO:0006468: protein phosphorylation	1.61E-02
109	GO:0010119: regulation of stomatal movement	1.86E-02
110	GO:0009853: photorespiration	1.99E-02
111	GO:0009867: jasmonic acid mediated signaling pathway	1.99E-02
112	GO:0006886: intracellular protein transport	2.00E-02
113	GO:0055114: oxidation-reduction process	2.03E-02
114	GO:0006887: exocytosis	2.25E-02
115	GO:0032259: methylation	2.29E-02
116	GO:0008283: cell proliferation	2.38E-02
117	GO:0009744: response to sucrose	2.38E-02
118	GO:0009408: response to heat	2.39E-02
119	GO:0009965: leaf morphogenesis	2.59E-02
120	GO:0051603: proteolysis involved in cellular protein catabolic process	3.02E-02
121	GO:0006096: glycolytic process	3.32E-02
122	GO:0016569: covalent chromatin modification	3.63E-02
123	GO:0009738: abscisic acid-activated signaling pathway	4.09E-02
124	GO:0009845: seed germination	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
2	GO:0050220: prostaglandin-E synthase activity	0.00E+00
3	GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity	0.00E+00
4	GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity	0.00E+00
5	GO:0004298: threonine-type endopeptidase activity	2.57E-07
6	GO:0005507: copper ion binding	1.48E-06
7	GO:0051920: peroxiredoxin activity	3.64E-05
8	GO:0102391: decanoate--CoA ligase activity	3.64E-05
9	GO:0004467: long-chain fatty acid-CoA ligase activity	4.92E-05
10	GO:0008233: peptidase activity	5.01E-05
11	GO:0016209: antioxidant activity	6.41E-05
12	GO:0015085: calcium ion transmembrane transporter activity	1.08E-04
13	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	1.08E-04
14	GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H	1.08E-04
15	GO:0005524: ATP binding	1.18E-04
16	GO:0005388: calcium-transporting ATPase activity	2.25E-04
17	GO:0004775: succinate-CoA ligase (ADP-forming) activity	2.52E-04
18	GO:0019172: glyoxalase III activity	2.52E-04
19	GO:0004338: glucan exo-1,3-beta-glucosidase activity	2.52E-04
20	GO:0004450: isocitrate dehydrogenase (NADP+) activity	2.52E-04
21	GO:0004776: succinate-CoA ligase (GDP-forming) activity	2.52E-04
22	GO:0004634: phosphopyruvate hydratase activity	2.52E-04
23	GO:0051287: NAD binding	3.37E-04
24	GO:0005093: Rab GDP-dissociation inhibitor activity	4.19E-04
25	GO:0016531: copper chaperone activity	4.19E-04
26	GO:0004148: dihydrolipoyl dehydrogenase activity	4.19E-04
27	GO:0031683: G-protein beta/gamma-subunit complex binding	4.19E-04
28	GO:0001664: G-protein coupled receptor binding	4.19E-04
29	GO:0004449: isocitrate dehydrogenase (NAD+) activity	6.01E-04
30	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	7.01E-04
31	GO:0004345: glucose-6-phosphate dehydrogenase activity	7.98E-04
32	GO:0043495: protein anchor	7.98E-04
33	GO:0008237: metallopeptidase activity	1.09E-03
34	GO:0030976: thiamine pyrophosphate binding	1.23E-03
35	GO:0019900: kinase binding	1.47E-03
36	GO:0016831: carboxy-lyase activity	1.73E-03
37	GO:0008235: metalloexopeptidase activity	1.73E-03
38	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.73E-03
39	GO:0050897: cobalt ion binding	1.82E-03
40	GO:0005544: calcium-dependent phospholipid binding	2.00E-03
41	GO:0000287: magnesium ion binding	2.02E-03
42	GO:0004672: protein kinase activity	2.51E-03
43	GO:0015112: nitrate transmembrane transporter activity	2.88E-03
44	GO:0008171: O-methyltransferase activity	3.20E-03
45	GO:0044183: protein binding involved in protein folding	3.53E-03
46	GO:0004177: aminopeptidase activity	3.53E-03
47	GO:0008559: xenobiotic-transporting ATPase activity	3.53E-03
48	GO:0008266: poly(U) RNA binding	4.59E-03
49	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.59E-03
50	GO:0009055: electron carrier activity	4.85E-03
51	GO:0051082: unfolded protein binding	4.86E-03
52	GO:0005528: FK506 binding	5.75E-03
53	GO:0004540: ribonuclease activity	6.56E-03
54	GO:0004674: protein serine/threonine kinase activity	6.74E-03
55	GO:0008810: cellulase activity	7.42E-03
56	GO:0003756: protein disulfide isomerase activity	7.87E-03
57	GO:0004601: peroxidase activity	1.30E-02
58	GO:0050660: flavin adenine dinucleotide binding	1.51E-02
59	GO:0005516: calmodulin binding	1.54E-02
60	GO:0030247: polysaccharide binding	1.56E-02
61	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.62E-02
62	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.68E-02
63	GO:0005096: GTPase activator activity	1.74E-02
64	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.86E-02
65	GO:0000149: SNARE binding	2.12E-02
66	GO:0050661: NADP binding	2.18E-02
67	GO:0042393: histone binding	2.18E-02
68	GO:0005484: SNAP receptor activity	2.38E-02
69	GO:0051537: 2 iron, 2 sulfur cluster binding	2.52E-02
70	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.66E-02
71	GO:0046872: metal ion binding	3.10E-02
72	GO:0015035: protein disulfide oxidoreductase activity	3.86E-02
73	GO:0016746: transferase activity, transferring acyl groups	3.86E-02
74	GO:0004386: helicase activity	4.02E-02
75	GO:0030170: pyridoxal phosphate binding	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0005839: proteasome core complex	2.57E-07
2	GO:0019773: proteasome core complex, alpha-subunit complex	9.31E-07
3	GO:0000502: proteasome complex	1.12E-06
4	GO:0005774: vacuolar membrane	1.28E-06
5	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.03E-05
6	GO:0005886: plasma membrane	1.03E-05
7	GO:0005758: mitochondrial intermembrane space	1.15E-05
8	GO:0048046: apoplast	1.17E-05
9	GO:0005773: vacuole	5.06E-05
10	GO:0005829: cytosol	5.35E-05
11	GO:0000015: phosphopyruvate hydratase complex	2.52E-04
12	GO:0005750: mitochondrial respiratory chain complex III	2.55E-04
13	GO:0005753: mitochondrial proton-transporting ATP synthase complex	2.87E-04
14	GO:0005739: mitochondrion	3.91E-04
15	GO:0046861: glyoxysomal membrane	4.19E-04
16	GO:0005741: mitochondrial outer membrane	4.33E-04
17	GO:0005747: mitochondrial respiratory chain complex I	5.01E-04
18	GO:0005759: mitochondrial matrix	1.06E-03
19	GO:0005783: endoplasmic reticulum	1.49E-03
20	GO:0045273: respiratory chain complex II	2.00E-03
21	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	2.00E-03
22	GO:0009514: glyoxysome	2.28E-03
23	GO:0005740: mitochondrial envelope	3.20E-03
24	GO:0008541: proteasome regulatory particle, lid subcomplex	3.53E-03
25	GO:0070469: respiratory chain	6.15E-03
26	GO:0045271: respiratory chain complex I	6.15E-03
27	GO:0015935: small ribosomal subunit	6.56E-03
28	GO:0009506: plasmodesma	6.78E-03
29	GO:0009504: cell plate	1.02E-02
30	GO:0005730: nucleolus	1.22E-02
31	GO:0005788: endoplasmic reticulum lumen	1.45E-02
32	GO:0000325: plant-type vacuole	1.86E-02
33	GO:0031201: SNARE complex	2.25E-02
34	GO:0090406: pollen tube	2.38E-02
35	GO:0031966: mitochondrial membrane	2.80E-02
36	GO:0005887: integral component of plasma membrane	3.24E-02
37	GO:0005834: heterotrimeric G-protein complex	3.47E-02
38	GO:0005789: endoplasmic reticulum membrane	3.80E-02
39	GO:0022626: cytosolic ribosome	4.05E-02
40	GO:0005623: cell	4.52E-02
41	GO:0005777: peroxisome	4.84E-02