GO Enrichment Analysis of Co-expressed Genes with
AT5G62440
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 2 | GO:0032264: IMP salvage | 0.00E+00 |
| 3 | GO:0000478: endonucleolytic cleavage involved in rRNA processing | 0.00E+00 |
| 4 | GO:0007160: cell-matrix adhesion | 0.00E+00 |
| 5 | GO:0010636: positive regulation of mitochondrial fusion | 0.00E+00 |
| 6 | GO:0080056: petal vascular tissue pattern formation | 0.00E+00 |
| 7 | GO:0048312: intracellular distribution of mitochondria | 0.00E+00 |
| 8 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 9 | GO:0080057: sepal vascular tissue pattern formation | 0.00E+00 |
| 10 | GO:0009168: purine ribonucleoside monophosphate biosynthetic process | 2.88E-05 |
| 11 | GO:0030198: extracellular matrix organization | 2.88E-05 |
| 12 | GO:0010235: guard mother cell cytokinesis | 7.28E-05 |
| 13 | GO:0045824: negative regulation of innate immune response | 2.57E-04 |
| 14 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 2.57E-04 |
| 15 | GO:0033320: UDP-D-xylose biosynthetic process | 2.57E-04 |
| 16 | GO:0018279: protein N-linked glycosylation via asparagine | 3.30E-04 |
| 17 | GO:0001731: formation of translation preinitiation complex | 4.06E-04 |
| 18 | GO:0006751: glutathione catabolic process | 4.06E-04 |
| 19 | GO:0042732: D-xylose metabolic process | 4.06E-04 |
| 20 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.86E-04 |
| 21 | GO:0000911: cytokinesis by cell plate formation | 4.86E-04 |
| 22 | GO:0006875: cellular metal ion homeostasis | 6.55E-04 |
| 23 | GO:0007389: pattern specification process | 7.44E-04 |
| 24 | GO:0010018: far-red light signaling pathway | 9.29E-04 |
| 25 | GO:0048829: root cap development | 1.03E-03 |
| 26 | GO:0006913: nucleocytoplasmic transport | 1.13E-03 |
| 27 | GO:0045037: protein import into chloroplast stroma | 1.23E-03 |
| 28 | GO:0010588: cotyledon vascular tissue pattern formation | 1.34E-03 |
| 29 | GO:0010102: lateral root morphogenesis | 1.34E-03 |
| 30 | GO:0006446: regulation of translational initiation | 1.45E-03 |
| 31 | GO:0009225: nucleotide-sugar metabolic process | 1.56E-03 |
| 32 | GO:0009825: multidimensional cell growth | 1.56E-03 |
| 33 | GO:0042753: positive regulation of circadian rhythm | 1.67E-03 |
| 34 | GO:0034976: response to endoplasmic reticulum stress | 1.67E-03 |
| 35 | GO:0006406: mRNA export from nucleus | 1.79E-03 |
| 36 | GO:0010501: RNA secondary structure unwinding | 2.70E-03 |
| 37 | GO:0010305: leaf vascular tissue pattern formation | 2.84E-03 |
| 38 | GO:0080156: mitochondrial mRNA modification | 3.28E-03 |
| 39 | GO:0009639: response to red or far red light | 3.73E-03 |
| 40 | GO:0016126: sterol biosynthetic process | 4.21E-03 |
| 41 | GO:0006888: ER to Golgi vesicle-mediated transport | 4.71E-03 |
| 42 | GO:0009734: auxin-activated signaling pathway | 5.97E-03 |
| 43 | GO:0009793: embryo development ending in seed dormancy | 7.19E-03 |
| 44 | GO:0009664: plant-type cell wall organization | 8.29E-03 |
| 45 | GO:0006364: rRNA processing | 8.71E-03 |
| 46 | GO:0009585: red, far-red light phototransduction | 8.71E-03 |
| 47 | GO:0006096: glycolytic process | 9.79E-03 |
| 48 | GO:0048367: shoot system development | 1.00E-02 |
| 49 | GO:0000398: mRNA splicing, via spliceosome | 1.23E-02 |
| 50 | GO:0006413: translational initiation | 1.56E-02 |
| 51 | GO:0040008: regulation of growth | 1.59E-02 |
| 52 | GO:0009733: response to auxin | 1.71E-02 |
| 53 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.78E-02 |
| 54 | GO:0009826: unidimensional cell growth | 2.18E-02 |
| 55 | GO:0006810: transport | 2.24E-02 |
| 56 | GO:0042254: ribosome biogenesis | 2.27E-02 |
| 57 | GO:0048366: leaf development | 2.52E-02 |
| 58 | GO:0045454: cell redox homeostasis | 2.97E-02 |
| 59 | GO:0006886: intracellular protein transport | 3.04E-02 |
| 60 | GO:0006869: lipid transport | 3.17E-02 |
| 61 | GO:0032259: methylation | 3.34E-02 |
| 62 | GO:0006397: mRNA processing | 3.55E-02 |
| 63 | GO:0048364: root development | 3.55E-02 |
| 64 | GO:0008152: metabolic process | 3.70E-02 |
| 65 | GO:0006508: proteolysis | 4.67E-02 |
| 66 | GO:0009735: response to cytokinin | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004631: phosphomevalonate kinase activity | 0.00E+00 |
| 2 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 3 | GO:0000384: first spliceosomal transesterification activity | 0.00E+00 |
| 4 | GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity | 0.00E+00 |
| 5 | GO:0005201: extracellular matrix structural constituent | 0.00E+00 |
| 6 | GO:0003876: AMP deaminase activity | 0.00E+00 |
| 7 | GO:0003729: mRNA binding | 1.01E-04 |
| 8 | GO:0070181: small ribosomal subunit rRNA binding | 1.27E-04 |
| 9 | GO:0035198: miRNA binding | 1.89E-04 |
| 10 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.89E-04 |
| 11 | GO:0005524: ATP binding | 2.90E-04 |
| 12 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.30E-04 |
| 13 | GO:0048040: UDP-glucuronate decarboxylase activity | 4.06E-04 |
| 14 | GO:0070403: NAD+ binding | 4.86E-04 |
| 15 | GO:0008143: poly(A) binding | 5.68E-04 |
| 16 | GO:0003676: nucleic acid binding | 6.99E-04 |
| 17 | GO:0043424: protein histidine kinase binding | 1.92E-03 |
| 18 | GO:0003723: RNA binding | 2.13E-03 |
| 19 | GO:0003756: protein disulfide isomerase activity | 2.43E-03 |
| 20 | GO:0016853: isomerase activity | 2.99E-03 |
| 21 | GO:0004004: ATP-dependent RNA helicase activity | 4.71E-03 |
| 22 | GO:0004222: metalloendopeptidase activity | 5.40E-03 |
| 23 | GO:0003697: single-stranded DNA binding | 5.94E-03 |
| 24 | GO:0043621: protein self-association | 7.48E-03 |
| 25 | GO:0015171: amino acid transmembrane transporter activity | 9.36E-03 |
| 26 | GO:0016746: transferase activity, transferring acyl groups | 1.14E-02 |
| 27 | GO:0008026: ATP-dependent helicase activity | 1.16E-02 |
| 28 | GO:0004386: helicase activity | 1.19E-02 |
| 29 | GO:0008565: protein transporter activity | 1.48E-02 |
| 30 | GO:0003743: translation initiation factor activity | 1.83E-02 |
| 31 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.95E-02 |
| 32 | GO:0008168: methyltransferase activity | 2.18E-02 |
| 33 | GO:0046872: metal ion binding | 3.08E-02 |
| 34 | GO:0016887: ATPase activity | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0008305: integrin complex | 0.00E+00 |
| 3 | GO:0070274: RES complex | 0.00E+00 |
| 4 | GO:0005774: vacuolar membrane | 6.70E-07 |
| 5 | GO:0005783: endoplasmic reticulum | 7.07E-05 |
| 6 | GO:0045254: pyruvate dehydrogenase complex | 7.28E-05 |
| 7 | GO:0008250: oligosaccharyltransferase complex | 3.30E-04 |
| 8 | GO:0016282: eukaryotic 43S preinitiation complex | 4.06E-04 |
| 9 | GO:0030127: COPII vesicle coat | 4.06E-04 |
| 10 | GO:0033290: eukaryotic 48S preinitiation complex | 4.86E-04 |
| 11 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 5.68E-04 |
| 12 | GO:0031595: nuclear proteasome complex | 5.68E-04 |
| 13 | GO:0010494: cytoplasmic stress granule | 8.35E-04 |
| 14 | GO:0005730: nucleolus | 8.65E-04 |
| 15 | GO:0071011: precatalytic spliceosome | 9.29E-04 |
| 16 | GO:0005686: U2 snRNP | 1.03E-03 |
| 17 | GO:0005829: cytosol | 1.06E-03 |
| 18 | GO:0071013: catalytic step 2 spliceosome | 1.13E-03 |
| 19 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.13E-03 |
| 20 | GO:0031307: integral component of mitochondrial outer membrane | 1.23E-03 |
| 21 | GO:0032040: small-subunit processome | 1.23E-03 |
| 22 | GO:0005750: mitochondrial respiratory chain complex III | 1.45E-03 |
| 23 | GO:0043234: protein complex | 1.67E-03 |
| 24 | GO:0046658: anchored component of plasma membrane | 2.01E-03 |
| 25 | GO:0030136: clathrin-coated vesicle | 2.57E-03 |
| 26 | GO:0032580: Golgi cisterna membrane | 3.73E-03 |
| 27 | GO:0005788: endoplasmic reticulum lumen | 4.37E-03 |
| 28 | GO:0000502: proteasome complex | 8.71E-03 |
| 29 | GO:0005794: Golgi apparatus | 9.10E-03 |
| 30 | GO:0016607: nuclear speck | 1.00E-02 |
| 31 | GO:0009706: chloroplast inner membrane | 1.12E-02 |
| 32 | GO:0005623: cell | 1.33E-02 |
| 33 | GO:0005622: intracellular | 1.34E-02 |
| 34 | GO:0005759: mitochondrial matrix | 1.54E-02 |
| 35 | GO:0009505: plant-type cell wall | 1.91E-02 |
| 36 | GO:0009506: plasmodesma | 1.93E-02 |
| 37 | GO:0005789: endoplasmic reticulum membrane | 2.33E-02 |
| 38 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.39E-02 |
| 39 | GO:0043231: intracellular membrane-bounded organelle | 3.70E-02 |
| 40 | GO:0005737: cytoplasm | 4.60E-02 |