GO Enrichment Analysis of Co-expressed Genes with
AT5G62130
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene | 0.00E+00 |
| 2 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.53E-06 |
| 3 | GO:0071490: cellular response to far red light | 8.86E-06 |
| 4 | GO:0016119: carotene metabolic process | 8.86E-06 |
| 5 | GO:0071491: cellular response to red light | 2.38E-05 |
| 6 | GO:0007154: cell communication | 2.38E-05 |
| 7 | GO:0071492: cellular response to UV-A | 4.33E-05 |
| 8 | GO:0048573: photoperiodism, flowering | 5.62E-05 |
| 9 | GO:0006572: tyrosine catabolic process | 6.64E-05 |
| 10 | GO:2000114: regulation of establishment of cell polarity | 6.64E-05 |
| 11 | GO:0010148: transpiration | 6.64E-05 |
| 12 | GO:0071483: cellular response to blue light | 9.27E-05 |
| 13 | GO:0071486: cellular response to high light intensity | 9.27E-05 |
| 14 | GO:0010117: photoprotection | 1.21E-04 |
| 15 | GO:0016123: xanthophyll biosynthetic process | 1.21E-04 |
| 16 | GO:0016094: polyprenol biosynthetic process | 1.21E-04 |
| 17 | GO:0019408: dolichol biosynthetic process | 1.21E-04 |
| 18 | GO:0016120: carotene biosynthetic process | 1.21E-04 |
| 19 | GO:0010189: vitamin E biosynthetic process | 1.85E-04 |
| 20 | GO:0048766: root hair initiation | 2.54E-04 |
| 21 | GO:0010099: regulation of photomorphogenesis | 2.91E-04 |
| 22 | GO:0000272: polysaccharide catabolic process | 4.48E-04 |
| 23 | GO:0010223: secondary shoot formation | 5.76E-04 |
| 24 | GO:0010540: basipetal auxin transport | 5.76E-04 |
| 25 | GO:0034605: cellular response to heat | 5.76E-04 |
| 26 | GO:0010030: positive regulation of seed germination | 6.20E-04 |
| 27 | GO:0010187: negative regulation of seed germination | 7.11E-04 |
| 28 | GO:0080167: response to karrikin | 7.17E-04 |
| 29 | GO:0016117: carotenoid biosynthetic process | 1.00E-03 |
| 30 | GO:0009911: positive regulation of flower development | 1.61E-03 |
| 31 | GO:0009416: response to light stimulus | 1.80E-03 |
| 32 | GO:0035556: intracellular signal transduction | 1.89E-03 |
| 33 | GO:0010119: regulation of stomatal movement | 2.12E-03 |
| 34 | GO:0009910: negative regulation of flower development | 2.12E-03 |
| 35 | GO:0031347: regulation of defense response | 3.03E-03 |
| 36 | GO:0006486: protein glycosylation | 3.26E-03 |
| 37 | GO:0009585: red, far-red light phototransduction | 3.26E-03 |
| 38 | GO:0009909: regulation of flower development | 3.49E-03 |
| 39 | GO:0030154: cell differentiation | 3.90E-03 |
| 40 | GO:0009740: gibberellic acid mediated signaling pathway | 3.98E-03 |
| 41 | GO:0042545: cell wall modification | 4.06E-03 |
| 42 | GO:0009409: response to cold | 4.84E-03 |
| 43 | GO:0009058: biosynthetic process | 5.01E-03 |
| 44 | GO:0006468: protein phosphorylation | 5.13E-03 |
| 45 | GO:0006633: fatty acid biosynthetic process | 5.65E-03 |
| 46 | GO:0007623: circadian rhythm | 6.03E-03 |
| 47 | GO:0010150: leaf senescence | 6.03E-03 |
| 48 | GO:0045490: pectin catabolic process | 6.03E-03 |
| 49 | GO:0010468: regulation of gene expression | 6.81E-03 |
| 50 | GO:0009658: chloroplast organization | 8.16E-03 |
| 51 | GO:0006970: response to osmotic stress | 8.59E-03 |
| 52 | GO:0048366: leaf development | 9.15E-03 |
| 53 | GO:0015979: photosynthesis | 1.04E-02 |
| 54 | GO:0016567: protein ubiquitination | 1.09E-02 |
| 55 | GO:0009734: auxin-activated signaling pathway | 1.59E-02 |
| 56 | GO:0009908: flower development | 1.75E-02 |
| 57 | GO:0009735: response to cytokinin | 1.76E-02 |
| 58 | GO:0045893: positive regulation of transcription, DNA-templated | 2.07E-02 |
| 59 | GO:0055085: transmembrane transport | 2.22E-02 |
| 60 | GO:0009414: response to water deprivation | 3.05E-02 |
| 61 | GO:0071555: cell wall organization | 3.10E-02 |
| 62 | GO:0005975: carbohydrate metabolic process | 4.18E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity | 0.00E+00 |
| 2 | GO:0016719: carotene 7,8-desaturase activity | 0.00E+00 |
| 3 | GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity | 0.00E+00 |
| 4 | GO:0010291: carotene beta-ring hydroxylase activity | 2.38E-05 |
| 5 | GO:1901981: phosphatidylinositol phosphate binding | 2.38E-05 |
| 6 | GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity | 4.33E-05 |
| 7 | GO:0080032: methyl jasmonate esterase activity | 9.27E-05 |
| 8 | GO:0002094: polyprenyltransferase activity | 1.21E-04 |
| 9 | GO:0045547: dehydrodolichyl diphosphate synthase activity | 1.21E-04 |
| 10 | GO:0080030: methyl indole-3-acetate esterase activity | 1.52E-04 |
| 11 | GO:0008429: phosphatidylethanolamine binding | 1.52E-04 |
| 12 | GO:0016161: beta-amylase activity | 1.85E-04 |
| 13 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 5.76E-04 |
| 14 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 6.66E-04 |
| 15 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 6.66E-04 |
| 16 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 6.66E-04 |
| 17 | GO:0022891: substrate-specific transmembrane transporter activity | 9.02E-04 |
| 18 | GO:0001085: RNA polymerase II transcription factor binding | 1.10E-03 |
| 19 | GO:0008483: transaminase activity | 1.49E-03 |
| 20 | GO:0016168: chlorophyll binding | 1.67E-03 |
| 21 | GO:0030247: polysaccharide binding | 1.79E-03 |
| 22 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.12E-03 |
| 23 | GO:0045330: aspartyl esterase activity | 3.49E-03 |
| 24 | GO:0030599: pectinesterase activity | 3.98E-03 |
| 25 | GO:0016746: transferase activity, transferring acyl groups | 4.23E-03 |
| 26 | GO:0004842: ubiquitin-protein transferase activity | 4.94E-03 |
| 27 | GO:0030170: pyridoxal phosphate binding | 5.19E-03 |
| 28 | GO:0004252: serine-type endopeptidase activity | 5.19E-03 |
| 29 | GO:0004672: protein kinase activity | 5.25E-03 |
| 30 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 5.28E-03 |
| 31 | GO:0046910: pectinesterase inhibitor activity | 5.75E-03 |
| 32 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 7.11E-03 |
| 33 | GO:0016788: hydrolase activity, acting on ester bonds | 8.27E-03 |
| 34 | GO:0003682: chromatin binding | 8.48E-03 |
| 35 | GO:0004674: protein serine/threonine kinase activity | 1.77E-02 |
| 36 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.29E-02 |
| 37 | GO:0008270: zinc ion binding | 2.31E-02 |
| 38 | GO:0005506: iron ion binding | 3.07E-02 |
| 39 | GO:0044212: transcription regulatory region DNA binding | 3.10E-02 |
| 40 | GO:0005524: ATP binding | 3.23E-02 |
| 41 | GO:0003824: catalytic activity | 3.31E-02 |
| 42 | GO:0016491: oxidoreductase activity | 3.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009925: basal plasma membrane | 2.38E-05 |
| 2 | GO:0009509: chromoplast | 4.33E-05 |
| 3 | GO:0009522: photosystem I | 1.16E-03 |
| 4 | GO:0009523: photosystem II | 1.21E-03 |
| 5 | GO:0071944: cell periphery | 1.38E-03 |
| 6 | GO:0005667: transcription factor complex | 1.73E-03 |
| 7 | GO:0009505: plant-type cell wall | 4.49E-03 |
| 8 | GO:0005783: endoplasmic reticulum | 4.51E-03 |
| 9 | GO:0046658: anchored component of plasma membrane | 7.32E-03 |
| 10 | GO:0031969: chloroplast membrane | 9.48E-03 |
| 11 | GO:0009507: chloroplast | 1.41E-02 |
| 12 | GO:0005618: cell wall | 1.42E-02 |
| 13 | GO:0005737: cytoplasm | 1.59E-02 |
| 14 | GO:0031225: anchored component of membrane | 2.57E-02 |