co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G61570

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071370: cellular response to gibberellin stimulus	0.00E+00
2	GO:0015822: ornithine transport	0.00E+00
3	GO:0009715: chalcone biosynthetic process	0.00E+00
4	GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene	0.00E+00
5	GO:0005996: monosaccharide metabolic process	0.00E+00
6	GO:0010336: gibberellic acid homeostasis	0.00E+00
7	GO:0090393: sepal giant cell development	0.00E+00
8	GO:0080167: response to karrikin	1.10E-06
9	GO:0009813: flavonoid biosynthetic process	1.67E-05
10	GO:0071555: cell wall organization	2.99E-05
11	GO:0017148: negative regulation of translation	6.42E-05
12	GO:0045489: pectin biosynthetic process	7.66E-05
13	GO:0071554: cell wall organization or biogenesis	1.05E-04
14	GO:0006659: phosphatidylserine biosynthetic process	1.54E-04
15	GO:0000066: mitochondrial ornithine transport	1.54E-04
16	GO:0019510: S-adenosylhomocysteine catabolic process	1.54E-04
17	GO:0010362: negative regulation of anion channel activity by blue light	1.54E-04
18	GO:1901349: glucosinolate transport	1.54E-04
19	GO:0006438: valyl-tRNA aminoacylation	1.54E-04
20	GO:0090449: phloem glucosinolate loading	1.54E-04
21	GO:0018298: protein-chromophore linkage	2.59E-04
22	GO:0000272: polysaccharide catabolic process	2.81E-04
23	GO:0030388: fructose 1,6-bisphosphate metabolic process	3.51E-04
24	GO:2000123: positive regulation of stomatal complex development	3.51E-04
25	GO:0009629: response to gravity	3.51E-04
26	GO:1903338: regulation of cell wall organization or biogenesis	3.51E-04
27	GO:0033353: S-adenosylmethionine cycle	3.51E-04
28	GO:0015712: hexose phosphate transport	3.51E-04
29	GO:0016051: carbohydrate biosynthetic process	3.55E-04
30	GO:0009767: photosynthetic electron transport chain	3.67E-04
31	GO:0006810: transport	4.43E-04
32	GO:0005985: sucrose metabolic process	4.65E-04
33	GO:0035436: triose phosphate transmembrane transport	5.75E-04
34	GO:0006000: fructose metabolic process	5.75E-04
35	GO:0032877: positive regulation of DNA endoreduplication	8.23E-04
36	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	8.23E-04
37	GO:0016117: carotenoid biosynthetic process	9.61E-04
38	GO:0000271: polysaccharide biosynthetic process	1.04E-03
39	GO:0009902: chloroplast relocation	1.09E-03
40	GO:0009694: jasmonic acid metabolic process	1.09E-03
41	GO:0006542: glutamine biosynthetic process	1.09E-03
42	GO:0019676: ammonia assimilation cycle	1.09E-03
43	GO:0048442: sepal development	1.09E-03
44	GO:0009765: photosynthesis, light harvesting	1.09E-03
45	GO:0045727: positive regulation of translation	1.09E-03
46	GO:2000038: regulation of stomatal complex development	1.09E-03
47	GO:0006546: glycine catabolic process	1.09E-03
48	GO:0015713: phosphoglycerate transport	1.09E-03
49	GO:0006021: inositol biosynthetic process	1.09E-03
50	GO:0009791: post-embryonic development	1.28E-03
51	GO:0016123: xanthophyll biosynthetic process	1.38E-03
52	GO:0010375: stomatal complex patterning	1.38E-03
53	GO:0016120: carotene biosynthetic process	1.38E-03
54	GO:0009117: nucleotide metabolic process	1.70E-03
55	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.70E-03
56	GO:0006751: glutathione catabolic process	1.70E-03
57	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.70E-03
58	GO:0005975: carbohydrate metabolic process	1.76E-03
59	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.03E-03
60	GO:0010076: maintenance of floral meristem identity	2.03E-03
61	GO:0007623: circadian rhythm	2.20E-03
62	GO:0009817: defense response to fungus, incompatible interaction	2.54E-03
63	GO:0009617: response to bacterium	2.76E-03
64	GO:0031540: regulation of anthocyanin biosynthetic process	2.77E-03
65	GO:0007155: cell adhesion	2.77E-03
66	GO:0010218: response to far red light	2.80E-03
67	GO:0032544: plastid translation	3.16E-03
68	GO:0006002: fructose 6-phosphate metabolic process	3.16E-03
69	GO:0022900: electron transport chain	3.16E-03
70	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	3.16E-03
71	GO:0009637: response to blue light	3.21E-03
72	GO:0048589: developmental growth	3.58E-03
73	GO:0009056: catabolic process	3.58E-03
74	GO:0009638: phototropism	4.01E-03
75	GO:0010114: response to red light	4.13E-03
76	GO:0010192: mucilage biosynthetic process	4.46E-03
77	GO:0051555: flavonol biosynthetic process	4.46E-03
78	GO:0048441: petal development	4.46E-03
79	GO:0018119: peptidyl-cysteine S-nitrosylation	4.92E-03
80	GO:0009773: photosynthetic electron transport in photosystem I	4.92E-03
81	GO:0019684: photosynthesis, light reaction	4.92E-03
82	GO:0043085: positive regulation of catalytic activity	4.92E-03
83	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.25E-03
84	GO:0016024: CDP-diacylglycerol biosynthetic process	5.41E-03
85	GO:0010224: response to UV-B	5.75E-03
86	GO:0050826: response to freezing	5.91E-03
87	GO:0006094: gluconeogenesis	5.91E-03
88	GO:0005986: sucrose biosynthetic process	5.91E-03
89	GO:0006857: oligopeptide transport	5.95E-03
90	GO:0019253: reductive pentose-phosphate cycle	6.42E-03
91	GO:0048768: root hair cell tip growth	6.42E-03
92	GO:0010143: cutin biosynthetic process	6.42E-03
93	GO:0048440: carpel development	6.42E-03
94	GO:0009833: plant-type primary cell wall biogenesis	7.49E-03
95	GO:0007010: cytoskeleton organization	8.05E-03
96	GO:0009768: photosynthesis, light harvesting in photosystem I	8.63E-03
97	GO:0006418: tRNA aminoacylation for protein translation	8.63E-03
98	GO:0009695: jasmonic acid biosynthetic process	8.63E-03
99	GO:0051260: protein homooligomerization	9.22E-03
100	GO:0031408: oxylipin biosynthetic process	9.22E-03
101	GO:0006730: one-carbon metabolic process	9.82E-03
102	GO:0009411: response to UV	1.04E-02
103	GO:0048443: stamen development	1.11E-02
104	GO:0080022: primary root development	1.24E-02
105	GO:0010118: stomatal movement	1.24E-02
106	GO:0015991: ATP hydrolysis coupled proton transport	1.24E-02
107	GO:0042631: cellular response to water deprivation	1.24E-02
108	GO:0006633: fatty acid biosynthetic process	1.25E-02
109	GO:0006662: glycerol ether metabolic process	1.31E-02
110	GO:0008360: regulation of cell shape	1.31E-02
111	GO:0015986: ATP synthesis coupled proton transport	1.37E-02
112	GO:0019252: starch biosynthetic process	1.44E-02
113	GO:0008654: phospholipid biosynthetic process	1.44E-02
114	GO:0010583: response to cyclopentenone	1.59E-02
115	GO:1901657: glycosyl compound metabolic process	1.66E-02
116	GO:0009611: response to wounding	1.76E-02
117	GO:0007267: cell-cell signaling	1.81E-02
118	GO:0016126: sterol biosynthetic process	1.97E-02
119	GO:0009658: chloroplast organization	2.13E-02
120	GO:0042128: nitrate assimilation	2.13E-02
121	GO:0016311: dephosphorylation	2.29E-02
122	GO:0016049: cell growth	2.29E-02
123	GO:0007049: cell cycle	2.37E-02
124	GO:0030244: cellulose biosynthetic process	2.38E-02
125	GO:0009832: plant-type cell wall biogenesis	2.46E-02
126	GO:0048767: root hair elongation	2.46E-02
127	GO:0000160: phosphorelay signal transduction system	2.46E-02
128	GO:0009407: toxin catabolic process	2.55E-02
129	GO:0007568: aging	2.64E-02
130	GO:0009867: jasmonic acid mediated signaling pathway	2.81E-02
131	GO:0034599: cellular response to oxidative stress	2.90E-02
132	GO:0006839: mitochondrial transport	3.09E-02
133	GO:0045454: cell redox homeostasis	3.16E-02
134	GO:0009926: auxin polar transport	3.37E-02
135	GO:0042546: cell wall biogenesis	3.47E-02
136	GO:0008643: carbohydrate transport	3.56E-02
137	GO:0009636: response to toxic substance	3.66E-02
138	GO:0006855: drug transmembrane transport	3.76E-02
139	GO:0016042: lipid catabolic process	3.78E-02
140	GO:0000165: MAPK cascade	3.86E-02
141	GO:0006468: protein phosphorylation	4.05E-02
142	GO:0042742: defense response to bacterium	4.12E-02
143	GO:0009753: response to jasmonic acid	4.16E-02
144	GO:0009809: lignin biosynthetic process	4.17E-02
145	GO:0006364: rRNA processing	4.17E-02
146	GO:0051603: proteolysis involved in cellular protein catabolic process	4.27E-02
147	GO:0008152: metabolic process	4.28E-02
148	GO:0043086: negative regulation of catalytic activity	4.69E-02
149	GO:0009733: response to auxin	4.75E-02
150	GO:0048367: shoot system development	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0030795: jasmonate O-methyltransferase activity	0.00E+00
2	GO:0102078: methyl jasmonate methylesterase activity	0.00E+00
3	GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity	0.00E+00
4	GO:0030598: rRNA N-glycosylase activity	0.00E+00
5	GO:0016719: carotene 7,8-desaturase activity	0.00E+00
6	GO:0016210: naringenin-chalcone synthase activity	0.00E+00
7	GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity	0.00E+00
8	GO:0050613: delta14-sterol reductase activity	0.00E+00
9	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
10	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
11	GO:0045430: chalcone isomerase activity	1.88E-05
12	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	6.42E-05
13	GO:0004832: valine-tRNA ligase activity	1.54E-04
14	GO:0090448: glucosinolate:proton symporter activity	1.54E-04
15	GO:0045486: naringenin 3-dioxygenase activity	1.54E-04
16	GO:0004013: adenosylhomocysteinase activity	1.54E-04
17	GO:0010313: phytochrome binding	1.54E-04
18	GO:0016413: O-acetyltransferase activity	1.65E-04
19	GO:0004575: sucrose alpha-glucosidase activity	2.04E-04
20	GO:0048531: beta-1,3-galactosyltransferase activity	3.51E-04
21	GO:0010291: carotene beta-ring hydroxylase activity	3.51E-04
22	GO:0010297: heteropolysaccharide binding	3.51E-04
23	GO:0003839: gamma-glutamylcyclotransferase activity	3.51E-04
24	GO:0004047: aminomethyltransferase activity	3.51E-04
25	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	3.51E-04
26	GO:0000064: L-ornithine transmembrane transporter activity	3.51E-04
27	GO:0004512: inositol-3-phosphate synthase activity	3.51E-04
28	GO:0071917: triose-phosphate transmembrane transporter activity	5.75E-04
29	GO:0003913: DNA photolyase activity	5.75E-04
30	GO:0004148: dihydrolipoyl dehydrogenase activity	5.75E-04
31	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	7.56E-04
32	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	8.23E-04
33	GO:0009882: blue light photoreceptor activity	8.23E-04
34	GO:0048027: mRNA 5'-UTR binding	8.23E-04
35	GO:0035529: NADH pyrophosphatase activity	8.23E-04
36	GO:0016757: transferase activity, transferring glycosyl groups	8.88E-04
37	GO:0052689: carboxylic ester hydrolase activity	1.07E-03
38	GO:0015120: phosphoglycerate transmembrane transporter activity	1.09E-03
39	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.09E-03
40	GO:0052793: pectin acetylesterase activity	1.09E-03
41	GO:0098599: palmitoyl hydrolase activity	1.09E-03
42	GO:0019901: protein kinase binding	1.28E-03
43	GO:0004356: glutamate-ammonia ligase activity	1.38E-03
44	GO:0045431: flavonol synthase activity	1.38E-03
45	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.70E-03
46	GO:0080030: methyl indole-3-acetate esterase activity	1.70E-03
47	GO:0008474: palmitoyl-(protein) hydrolase activity	1.70E-03
48	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.70E-03
49	GO:0102229: amylopectin maltohydrolase activity	1.70E-03
50	GO:0042578: phosphoric ester hydrolase activity	1.70E-03
51	GO:0016161: beta-amylase activity	2.03E-03
52	GO:0015297: antiporter activity	2.08E-03
53	GO:0043295: glutathione binding	2.39E-03
54	GO:0016621: cinnamoyl-CoA reductase activity	2.39E-03
55	GO:0009881: photoreceptor activity	2.39E-03
56	GO:0004564: beta-fructofuranosidase activity	2.77E-03
57	GO:0008135: translation factor activity, RNA binding	3.16E-03
58	GO:0003843: 1,3-beta-D-glucan synthase activity	3.16E-03
59	GO:0016787: hydrolase activity	3.48E-03
60	GO:0005215: transporter activity	3.63E-03
61	GO:0008047: enzyme activator activity	4.46E-03
62	GO:0004860: protein kinase inhibitor activity	4.92E-03
63	GO:0046961: proton-transporting ATPase activity, rotational mechanism	4.92E-03
64	GO:0000155: phosphorelay sensor kinase activity	5.91E-03
65	GO:0051119: sugar transmembrane transporter activity	6.95E-03
66	GO:0004650: polygalacturonase activity	7.22E-03
67	GO:0031409: pigment binding	7.49E-03
68	GO:0031418: L-ascorbic acid binding	8.05E-03
69	GO:0004176: ATP-dependent peptidase activity	9.22E-03
70	GO:0016758: transferase activity, transferring hexosyl groups	9.65E-03
71	GO:0016760: cellulose synthase (UDP-forming) activity	1.04E-02
72	GO:0016829: lyase activity	1.07E-02
73	GO:0047134: protein-disulfide reductase activity	1.17E-02
74	GO:0004812: aminoacyl-tRNA ligase activity	1.17E-02
75	GO:0046910: pectinesterase inhibitor activity	1.28E-02
76	GO:0004791: thioredoxin-disulfide reductase activity	1.37E-02
77	GO:0005355: glucose transmembrane transporter activity	1.37E-02
78	GO:0010181: FMN binding	1.37E-02
79	GO:0050662: coenzyme binding	1.37E-02
80	GO:0048038: quinone binding	1.52E-02
81	GO:0004518: nuclease activity	1.59E-02
82	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.66E-02
83	GO:0016759: cellulose synthase activity	1.74E-02
84	GO:0016791: phosphatase activity	1.74E-02
85	GO:0004674: protein serine/threonine kinase activity	1.75E-02
86	GO:0005200: structural constituent of cytoskeleton	1.81E-02
87	GO:0008483: transaminase activity	1.81E-02
88	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.81E-02
89	GO:0008237: metallopeptidase activity	1.81E-02
90	GO:0004672: protein kinase activity	2.05E-02
91	GO:0016168: chlorophyll binding	2.05E-02
92	GO:0016788: hydrolase activity, acting on ester bonds	2.17E-02
93	GO:0016740: transferase activity	2.20E-02
94	GO:0102483: scopolin beta-glucosidase activity	2.21E-02
95	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.43E-02
96	GO:0015238: drug transmembrane transporter activity	2.46E-02
97	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.55E-02
98	GO:0004222: metalloendopeptidase activity	2.55E-02
99	GO:0050897: cobalt ion binding	2.64E-02
100	GO:0003746: translation elongation factor activity	2.81E-02
101	GO:0008422: beta-glucosidase activity	2.99E-02
102	GO:0004364: glutathione transferase activity	3.27E-02
103	GO:0004185: serine-type carboxypeptidase activity	3.37E-02
104	GO:0051537: 2 iron, 2 sulfur cluster binding	3.56E-02
105	GO:0005524: ATP binding	3.68E-02
106	GO:0051287: NAD binding	3.86E-02
107	GO:0016298: lipase activity	4.27E-02
108	GO:0045330: aspartyl esterase activity	4.48E-02
109	GO:0003777: microtubule motor activity	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0097708: intracellular vesicle	0.00E+00
2	GO:0009344: nitrite reductase complex [NAD(P)H]	0.00E+00
3	GO:0009941: chloroplast envelope	8.95E-06
4	GO:0005775: vacuolar lumen	1.01E-05
5	GO:0005794: Golgi apparatus	6.41E-05
6	GO:0009507: chloroplast	1.19E-04
7	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.70E-04
8	GO:0000325: plant-type vacuole	3.14E-04
9	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	3.51E-04
10	GO:0000427: plastid-encoded plastid RNA polymerase complex	3.51E-04
11	GO:0030095: chloroplast photosystem II	4.15E-04
12	GO:0009570: chloroplast stroma	5.18E-04
13	GO:0042406: extrinsic component of endoplasmic reticulum membrane	5.75E-04
14	GO:0009509: chromoplast	5.75E-04
15	GO:0009654: photosystem II oxygen evolving complex	6.32E-04
16	GO:0009535: chloroplast thylakoid membrane	1.12E-03
17	GO:0009534: chloroplast thylakoid	1.23E-03
18	GO:0019898: extrinsic component of membrane	1.28E-03
19	GO:0009543: chloroplast thylakoid lumen	1.47E-03
20	GO:0010168: ER body	1.70E-03
21	GO:0031225: anchored component of membrane	1.92E-03
22	GO:0005773: vacuole	2.56E-03
23	GO:0000148: 1,3-beta-D-glucan synthase complex	3.16E-03
24	GO:0048046: apoplast	3.24E-03
25	GO:0016021: integral component of membrane	3.68E-03
26	GO:0005576: extracellular region	3.78E-03
27	GO:0009505: plant-type cell wall	4.51E-03
28	GO:0048471: perinuclear region of cytoplasm	4.92E-03
29	GO:0005753: mitochondrial proton-transporting ATP synthase complex	6.95E-03
30	GO:0030076: light-harvesting complex	6.95E-03
31	GO:0030176: integral component of endoplasmic reticulum membrane	6.95E-03
32	GO:0010287: plastoglobule	9.38E-03
33	GO:0009705: plant-type vacuole membrane	1.37E-02
34	GO:0009522: photosystem I	1.37E-02
35	GO:0009523: photosystem II	1.44E-02
36	GO:0010319: stromule	1.81E-02
37	GO:0046658: anchored component of plasma membrane	1.82E-02
38	GO:0016020: membrane	1.82E-02
39	GO:0000139: Golgi membrane	1.82E-02
40	GO:0005886: plasma membrane	1.83E-02
41	GO:0009579: thylakoid	2.14E-02
42	GO:0031969: chloroplast membrane	2.64E-02
43	GO:0031902: late endosome membrane	3.18E-02
44	GO:0005618: cell wall	3.26E-02
45	GO:0005743: mitochondrial inner membrane	3.62E-02
46	GO:0005856: cytoskeleton	3.66E-02
47	GO:0005747: mitochondrial respiratory chain complex I	4.80E-02
48	GO:0009506: plasmodesma	4.83E-02