co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G61560

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006182: cGMP biosynthetic process	0.00E+00
2	GO:0006592: ornithine biosynthetic process	0.00E+00
3	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
4	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
5	GO:0046865: terpenoid transport	0.00E+00
6	GO:0033587: shikimate biosynthetic process	0.00E+00
7	GO:0051238: sequestering of metal ion	0.00E+00
8	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
9	GO:0071456: cellular response to hypoxia	2.52E-07
10	GO:0009617: response to bacterium	6.29E-07
11	GO:0009682: induced systemic resistance	9.47E-07
12	GO:0006468: protein phosphorylation	1.28E-06
13	GO:0060919: auxin influx	4.77E-06
14	GO:0010120: camalexin biosynthetic process	1.38E-05
15	GO:0010112: regulation of systemic acquired resistance	1.91E-05
16	GO:0051707: response to other organism	2.60E-05
17	GO:0001676: long-chain fatty acid metabolic process	3.75E-05
18	GO:0006536: glutamate metabolic process	6.70E-05
19	GO:0055114: oxidation-reduction process	1.06E-04
20	GO:0050832: defense response to fungus	1.37E-04
21	GO:0010315: auxin efflux	1.52E-04
22	GO:0042742: defense response to bacterium	1.75E-04
23	GO:1903648: positive regulation of chlorophyll catabolic process	3.24E-04
24	GO:0009623: response to parasitic fungus	3.24E-04
25	GO:0051245: negative regulation of cellular defense response	3.24E-04
26	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	3.24E-04
27	GO:0006481: C-terminal protein methylation	3.24E-04
28	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.24E-04
29	GO:0009700: indole phytoalexin biosynthetic process	3.24E-04
30	GO:0042759: long-chain fatty acid biosynthetic process	3.24E-04
31	GO:0010150: leaf senescence	3.34E-04
32	GO:0030091: protein repair	3.40E-04
33	GO:0007166: cell surface receptor signaling pathway	4.29E-04
34	GO:0009626: plant-type hypersensitive response	6.31E-04
35	GO:0009620: response to fungus	6.61E-04
36	GO:0043069: negative regulation of programmed cell death	6.91E-04
37	GO:0002215: defense response to nematode	7.07E-04
38	GO:0015865: purine nucleotide transport	7.07E-04
39	GO:0044419: interspecies interaction between organisms	7.07E-04
40	GO:2000693: positive regulation of seed maturation	7.07E-04
41	GO:0019441: tryptophan catabolic process to kynurenine	7.07E-04
42	GO:0097054: L-glutamate biosynthetic process	7.07E-04
43	GO:0031648: protein destabilization	7.07E-04
44	GO:0052544: defense response by callose deposition in cell wall	7.96E-04
45	GO:0002213: defense response to insect	9.08E-04
46	GO:0009817: defense response to fungus, incompatible interaction	1.01E-03
47	GO:0048767: root hair elongation	1.07E-03
48	GO:0009407: toxin catabolic process	1.14E-03
49	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.15E-03
50	GO:0015692: lead ion transport	1.15E-03
51	GO:0048281: inflorescence morphogenesis	1.15E-03
52	GO:0080168: abscisic acid transport	1.15E-03
53	GO:0010498: proteasomal protein catabolic process	1.15E-03
54	GO:0034051: negative regulation of plant-type hypersensitive response	1.15E-03
55	GO:0010359: regulation of anion channel activity	1.15E-03
56	GO:0010540: basipetal auxin transport	1.16E-03
57	GO:0070588: calcium ion transmembrane transport	1.29E-03
58	GO:0070301: cellular response to hydrogen peroxide	1.65E-03
59	GO:0046902: regulation of mitochondrial membrane permeability	1.65E-03
60	GO:0006537: glutamate biosynthetic process	1.65E-03
61	GO:0006612: protein targeting to membrane	1.65E-03
62	GO:0010255: glucose mediated signaling pathway	1.65E-03
63	GO:0046513: ceramide biosynthetic process	1.65E-03
64	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.65E-03
65	GO:0016998: cell wall macromolecule catabolic process	1.93E-03
66	GO:0009636: response to toxic substance	2.17E-03
67	GO:0019676: ammonia assimilation cycle	2.21E-03
68	GO:0010483: pollen tube reception	2.21E-03
69	GO:0010363: regulation of plant-type hypersensitive response	2.21E-03
70	GO:1901002: positive regulation of response to salt stress	2.21E-03
71	GO:0010107: potassium ion import	2.21E-03
72	GO:0080142: regulation of salicylic acid biosynthetic process	2.21E-03
73	GO:0006813: potassium ion transport	2.73E-03
74	GO:0006952: defense response	2.76E-03
75	GO:0000304: response to singlet oxygen	2.82E-03
76	GO:0009697: salicylic acid biosynthetic process	2.82E-03
77	GO:0034052: positive regulation of plant-type hypersensitive response	2.82E-03
78	GO:0042391: regulation of membrane potential	2.93E-03
79	GO:0015691: cadmium ion transport	3.49E-03
80	GO:1902456: regulation of stomatal opening	3.49E-03
81	GO:0009117: nucleotide metabolic process	3.49E-03
82	GO:0002238: response to molecule of fungal origin	3.49E-03
83	GO:0009759: indole glucosinolate biosynthetic process	3.49E-03
84	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	3.49E-03
85	GO:0006561: proline biosynthetic process	3.49E-03
86	GO:0010942: positive regulation of cell death	3.49E-03
87	GO:0009851: auxin biosynthetic process	3.64E-03
88	GO:0006623: protein targeting to vacuole	3.64E-03
89	GO:0002229: defense response to oomycetes	3.89E-03
90	GO:0009630: gravitropism	4.16E-03
91	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.20E-03
92	GO:1900056: negative regulation of leaf senescence	4.95E-03
93	GO:0071669: plant-type cell wall organization or biogenesis	4.95E-03
94	GO:1900057: positive regulation of leaf senescence	4.95E-03
95	GO:0050829: defense response to Gram-negative bacterium	4.95E-03
96	GO:1902074: response to salt	4.95E-03
97	GO:0051607: defense response to virus	5.32E-03
98	GO:0046686: response to cadmium ion	5.42E-03
99	GO:0009061: anaerobic respiration	5.76E-03
100	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.76E-03
101	GO:0009627: systemic acquired resistance	6.29E-03
102	GO:0009808: lignin metabolic process	6.60E-03
103	GO:0006526: arginine biosynthetic process	6.60E-03
104	GO:0010204: defense response signaling pathway, resistance gene-independent	6.60E-03
105	GO:0007338: single fertilization	7.48E-03
106	GO:0006098: pentose-phosphate shunt	7.48E-03
107	GO:0090305: nucleic acid phosphodiester bond hydrolysis	7.48E-03
108	GO:0034765: regulation of ion transmembrane transport	7.48E-03
109	GO:0090333: regulation of stomatal closure	7.48E-03
110	GO:0032259: methylation	7.94E-03
111	GO:0048268: clathrin coat assembly	8.41E-03
112	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	8.41E-03
113	GO:0008202: steroid metabolic process	8.41E-03
114	GO:0045087: innate immune response	9.33E-03
115	GO:0006896: Golgi to vacuole transport	9.37E-03
116	GO:0007064: mitotic sister chromatid cohesion	9.37E-03
117	GO:0009870: defense response signaling pathway, resistance gene-dependent	9.37E-03
118	GO:0006032: chitin catabolic process	9.37E-03
119	GO:0009688: abscisic acid biosynthetic process	9.37E-03
120	GO:0009698: phenylpropanoid metabolic process	1.04E-02
121	GO:0009089: lysine biosynthetic process via diaminopimelate	1.04E-02
122	GO:0000272: polysaccharide catabolic process	1.04E-02
123	GO:0048229: gametophyte development	1.04E-02
124	GO:0009737: response to abscisic acid	1.06E-02
125	GO:0006897: endocytosis	1.11E-02
126	GO:0006631: fatty acid metabolic process	1.11E-02
127	GO:0000266: mitochondrial fission	1.14E-02
128	GO:0012501: programmed cell death	1.14E-02
129	GO:0055046: microgametogenesis	1.25E-02
130	GO:0009718: anthocyanin-containing compound biosynthetic process	1.25E-02
131	GO:0002237: response to molecule of bacterial origin	1.36E-02
132	GO:0007034: vacuolar transport	1.36E-02
133	GO:0006855: drug transmembrane transport	1.41E-02
134	GO:0010053: root epidermal cell differentiation	1.48E-02
135	GO:0042343: indole glucosinolate metabolic process	1.48E-02
136	GO:0009846: pollen germination	1.52E-02
137	GO:0000162: tryptophan biosynthetic process	1.60E-02
138	GO:0009809: lignin biosynthetic process	1.63E-02
139	GO:0005992: trehalose biosynthetic process	1.72E-02
140	GO:0009863: salicylic acid mediated signaling pathway	1.72E-02
141	GO:0080147: root hair cell development	1.72E-02
142	GO:0006874: cellular calcium ion homeostasis	1.84E-02
143	GO:0048278: vesicle docking	1.97E-02
144	GO:0031408: oxylipin biosynthetic process	1.97E-02
145	GO:0048367: shoot system development	1.99E-02
146	GO:0006979: response to oxidative stress	2.00E-02
147	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.05E-02
148	GO:0010200: response to chitin	2.05E-02
149	GO:0009814: defense response, incompatible interaction	2.10E-02
150	GO:0030433: ubiquitin-dependent ERAD pathway	2.10E-02
151	GO:0031348: negative regulation of defense response	2.10E-02
152	GO:0010227: floral organ abscission	2.23E-02
153	GO:0071369: cellular response to ethylene stimulus	2.23E-02
154	GO:0009625: response to insect	2.23E-02
155	GO:0006508: proteolysis	2.28E-02
156	GO:0010584: pollen exine formation	2.37E-02
157	GO:0006817: phosphate ion transport	2.37E-02
158	GO:0009561: megagametogenesis	2.37E-02
159	GO:0070417: cellular response to cold	2.51E-02
160	GO:0000271: polysaccharide biosynthetic process	2.65E-02
161	GO:0006869: lipid transport	2.77E-02
162	GO:0006885: regulation of pH	2.80E-02
163	GO:0055085: transmembrane transport	2.86E-02
164	GO:0061025: membrane fusion	2.95E-02
165	GO:0008654: phospholipid biosynthetic process	3.10E-02
166	GO:0009751: response to salicylic acid	3.15E-02
167	GO:0010193: response to ozone	3.25E-02
168	GO:0006635: fatty acid beta-oxidation	3.25E-02
169	GO:1901657: glycosyl compound metabolic process	3.57E-02
170	GO:0030163: protein catabolic process	3.57E-02
171	GO:0009567: double fertilization forming a zygote and endosperm	3.73E-02
172	GO:0019760: glucosinolate metabolic process	3.73E-02
173	GO:0010252: auxin homeostasis	3.73E-02
174	GO:0071805: potassium ion transmembrane transport	3.89E-02
175	GO:0009607: response to biotic stimulus	4.40E-02
176	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.40E-02
177	GO:0009816: defense response to bacterium, incompatible interaction	4.40E-02
178	GO:0006906: vesicle fusion	4.57E-02
179	GO:0006950: response to stress	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0004168: dolichol kinase activity	0.00E+00
2	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
3	GO:0009940: amino-terminal vacuolar sorting propeptide binding	0.00E+00
4	GO:0015930: glutamate synthase activity	0.00E+00
5	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
6	GO:0008777: acetylornithine deacetylase activity	0.00E+00
7	GO:0004674: protein serine/threonine kinase activity	1.33E-06
8	GO:0005524: ATP binding	6.89E-06
9	GO:0005516: calmodulin binding	1.19E-05
10	GO:0016301: kinase activity	1.86E-05
11	GO:0050660: flavin adenine dinucleotide binding	2.83E-05
12	GO:0004351: glutamate decarboxylase activity	3.75E-05
13	GO:0010328: auxin influx transmembrane transporter activity	6.70E-05
14	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.51E-04
15	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.07E-04
16	GO:0004364: glutathione transferase activity	2.55E-04
17	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	3.24E-04
18	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	3.24E-04
19	GO:0033984: indole-3-glycerol-phosphate lyase activity	3.24E-04
20	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	3.24E-04
21	GO:0010209: vacuolar sorting signal binding	3.24E-04
22	GO:0010285: L,L-diaminopimelate aminotransferase activity	3.24E-04
23	GO:0016041: glutamate synthase (ferredoxin) activity	3.24E-04
24	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	5.20E-04
25	GO:0008171: O-methyltransferase activity	6.91E-04
26	GO:0004713: protein tyrosine kinase activity	6.91E-04
27	GO:0050291: sphingosine N-acyltransferase activity	7.07E-04
28	GO:0003958: NADPH-hemoprotein reductase activity	7.07E-04
29	GO:0032934: sterol binding	7.07E-04
30	GO:0004061: arylformamidase activity	7.07E-04
31	GO:0015036: disulfide oxidoreductase activity	7.07E-04
32	GO:0004385: guanylate kinase activity	7.07E-04
33	GO:0004177: aminopeptidase activity	7.96E-04
34	GO:0008559: xenobiotic-transporting ATPase activity	7.96E-04
35	GO:0005388: calcium-transporting ATPase activity	1.03E-03
36	GO:0010329: auxin efflux transmembrane transporter activity	1.03E-03
37	GO:0004022: alcohol dehydrogenase (NAD) activity	1.03E-03
38	GO:0000975: regulatory region DNA binding	1.15E-03
39	GO:0004383: guanylate cyclase activity	1.15E-03
40	GO:0016805: dipeptidase activity	1.15E-03
41	GO:0016595: glutamate binding	1.15E-03
42	GO:0030145: manganese ion binding	1.20E-03
43	GO:0008276: protein methyltransferase activity	1.65E-03
44	GO:0004834: tryptophan synthase activity	2.21E-03
45	GO:0003995: acyl-CoA dehydrogenase activity	2.21E-03
46	GO:0004031: aldehyde oxidase activity	2.21E-03
47	GO:0050302: indole-3-acetaldehyde oxidase activity	2.21E-03
48	GO:0010279: indole-3-acetic acid amido synthetase activity	2.21E-03
49	GO:0009055: electron carrier activity	2.41E-03
50	GO:0045431: flavonol synthase activity	2.82E-03
51	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	2.82E-03
52	GO:0003997: acyl-CoA oxidase activity	2.82E-03
53	GO:0005496: steroid binding	2.82E-03
54	GO:0051538: 3 iron, 4 sulfur cluster binding	2.82E-03
55	GO:0005471: ATP:ADP antiporter activity	2.82E-03
56	GO:0030551: cyclic nucleotide binding	2.93E-03
57	GO:0004605: phosphatidate cytidylyltransferase activity	3.49E-03
58	GO:0036402: proteasome-activating ATPase activity	3.49E-03
59	GO:0016491: oxidoreductase activity	3.76E-03
60	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	4.20E-03
61	GO:0005242: inward rectifier potassium channel activity	4.20E-03
62	GO:0051020: GTPase binding	4.20E-03
63	GO:0051753: mannan synthase activity	4.20E-03
64	GO:0102391: decanoate--CoA ligase activity	4.20E-03
65	GO:0004656: procollagen-proline 4-dioxygenase activity	4.20E-03
66	GO:0008235: metalloexopeptidase activity	4.95E-03
67	GO:0102425: myricetin 3-O-glucosyltransferase activity	4.95E-03
68	GO:0102360: daphnetin 3-O-glucosyltransferase activity	4.95E-03
69	GO:0004467: long-chain fatty acid-CoA ligase activity	4.95E-03
70	GO:0020037: heme binding	5.57E-03
71	GO:0047893: flavonol 3-O-glucosyltransferase activity	5.76E-03
72	GO:0004033: aldo-keto reductase (NADP) activity	5.76E-03
73	GO:0005506: iron ion binding	6.31E-03
74	GO:0030170: pyridoxal phosphate binding	6.50E-03
75	GO:0008142: oxysterol binding	6.60E-03
76	GO:0004683: calmodulin-dependent protein kinase activity	6.63E-03
77	GO:0030247: polysaccharide binding	6.63E-03
78	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	6.93E-03
79	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	6.99E-03
80	GO:0071949: FAD binding	7.48E-03
81	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.85E-03
82	GO:0004568: chitinase activity	9.37E-03
83	GO:0005545: 1-phosphatidylinositol binding	9.37E-03
84	GO:0005543: phospholipid binding	1.04E-02
85	GO:0050661: NADP binding	1.06E-02
86	GO:0004175: endopeptidase activity	1.36E-02
87	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.36E-02
88	GO:0008168: methyltransferase activity	1.43E-02
89	GO:0004190: aspartic-type endopeptidase activity	1.48E-02
90	GO:0030552: cAMP binding	1.48E-02
91	GO:0004867: serine-type endopeptidase inhibitor activity	1.48E-02
92	GO:0030553: cGMP binding	1.48E-02
93	GO:0017025: TBP-class protein binding	1.48E-02
94	GO:0008061: chitin binding	1.48E-02
95	GO:0004970: ionotropic glutamate receptor activity	1.48E-02
96	GO:0005217: intracellular ligand-gated ion channel activity	1.48E-02
97	GO:0031418: L-ascorbic acid binding	1.72E-02
98	GO:0005509: calcium ion binding	1.72E-02
99	GO:0008134: transcription factor binding	1.72E-02
100	GO:0005216: ion channel activity	1.84E-02
101	GO:0015079: potassium ion transmembrane transporter activity	1.84E-02
102	GO:0045735: nutrient reservoir activity	1.93E-02
103	GO:0008408: 3'-5' exonuclease activity	1.97E-02
104	GO:0035251: UDP-glucosyltransferase activity	1.97E-02
105	GO:0004497: monooxygenase activity	1.97E-02
106	GO:0016760: cellulose synthase (UDP-forming) activity	2.23E-02
107	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.37E-02
108	GO:0005249: voltage-gated potassium channel activity	2.65E-02
109	GO:0005451: monovalent cation:proton antiporter activity	2.65E-02
110	GO:0030276: clathrin binding	2.80E-02
111	GO:0015299: solute:proton antiporter activity	2.95E-02
112	GO:0010181: FMN binding	2.95E-02
113	GO:0019825: oxygen binding	3.39E-02
114	GO:0015385: sodium:proton antiporter activity	3.57E-02
115	GO:0016759: cellulose synthase activity	3.73E-02
116	GO:0008483: transaminase activity	3.89E-02
117	GO:0008237: metallopeptidase activity	3.89E-02
118	GO:0051213: dioxygenase activity	4.23E-02
119	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.57E-02
120	GO:0102483: scopolin beta-glucosidase activity	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.26E-08
2	GO:0005783: endoplasmic reticulum	2.84E-06
3	GO:0016021: integral component of membrane	1.87E-05
4	GO:0005770: late endosome	3.42E-04
5	GO:0005829: cytosol	4.23E-04
6	GO:0031314: extrinsic component of mitochondrial inner membrane	7.07E-04
7	GO:0005905: clathrin-coated pit	1.93E-03
8	GO:0030136: clathrin-coated vesicle	2.71E-03
9	GO:0005887: integral component of plasma membrane	3.64E-03
10	GO:0030173: integral component of Golgi membrane	4.20E-03
11	GO:0031597: cytosolic proteasome complex	4.20E-03
12	GO:0031595: nuclear proteasome complex	4.95E-03
13	GO:0005618: cell wall	6.71E-03
14	GO:0030665: clathrin-coated vesicle membrane	8.41E-03
15	GO:0008540: proteasome regulatory particle, base subcomplex	8.41E-03
16	GO:0000325: plant-type vacuole	8.51E-03
17	GO:0017119: Golgi transport complex	9.37E-03
18	GO:0043231: intracellular membrane-bounded organelle	9.83E-03
19	GO:0030176: integral component of endoplasmic reticulum membrane	1.48E-02
20	GO:0012505: endomembrane system	2.26E-02
21	GO:0009524: phragmoplast	3.07E-02
22	GO:0048046: apoplast	3.21E-02
23	GO:0071944: cell periphery	3.57E-02
24	GO:0005576: extracellular region	3.62E-02
25	GO:0005794: Golgi apparatus	3.64E-02
26	GO:0005789: endoplasmic reticulum membrane	4.00E-02