co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G61480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
2	GO:0007638: mechanosensory behavior	0.00E+00
3	GO:0008064: regulation of actin polymerization or depolymerization	0.00E+00
4	GO:0051493: regulation of cytoskeleton organization	0.00E+00
5	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
6	GO:0010442: guard cell morphogenesis	4.31E-05
7	GO:0055073: cadmium ion homeostasis	1.07E-04
8	GO:0052541: plant-type cell wall cellulose metabolic process	1.07E-04
9	GO:0006418: tRNA aminoacylation for protein translation	1.12E-04
10	GO:0090506: axillary shoot meristem initiation	1.84E-04
11	GO:0000413: protein peptidyl-prolyl isomerization	1.96E-04
12	GO:0006165: nucleoside diphosphate phosphorylation	2.70E-04
13	GO:0006228: UTP biosynthetic process	2.70E-04
14	GO:0010088: phloem development	2.70E-04
15	GO:0043572: plastid fission	2.70E-04
16	GO:0007231: osmosensory signaling pathway	2.70E-04
17	GO:0006241: CTP biosynthetic process	2.70E-04
18	GO:0007264: small GTPase mediated signal transduction	2.83E-04
19	GO:0000919: cell plate assembly	3.64E-04
20	GO:0071585: detoxification of cadmium ion	3.64E-04
21	GO:0033500: carbohydrate homeostasis	3.64E-04
22	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	3.64E-04
23	GO:0051322: anaphase	3.64E-04
24	GO:0006183: GTP biosynthetic process	3.64E-04
25	GO:0009658: chloroplast organization	4.55E-04
26	GO:0048359: mucilage metabolic process involved in seed coat development	4.63E-04
27	GO:0032543: mitochondrial translation	4.63E-04
28	GO:0006014: D-ribose metabolic process	5.67E-04
29	GO:0010067: procambium histogenesis	6.76E-04
30	GO:0048444: floral organ morphogenesis	6.76E-04
31	GO:0010555: response to mannitol	6.76E-04
32	GO:0071669: plant-type cell wall organization or biogenesis	7.90E-04
33	GO:0048528: post-embryonic root development	7.90E-04
34	GO:0009642: response to light intensity	9.08E-04
35	GO:0000028: ribosomal small subunit assembly	9.08E-04
36	GO:0010928: regulation of auxin mediated signaling pathway	9.08E-04
37	GO:0032544: plastid translation	1.03E-03
38	GO:0046916: cellular transition metal ion homeostasis	1.16E-03
39	GO:0015780: nucleotide-sugar transport	1.16E-03
40	GO:0006949: syncytium formation	1.43E-03
41	GO:0006415: translational termination	1.57E-03
42	GO:0006816: calcium ion transport	1.57E-03
43	GO:0045037: protein import into chloroplast stroma	1.72E-03
44	GO:0010020: chloroplast fission	2.03E-03
45	GO:0010223: secondary shoot formation	2.03E-03
46	GO:0009934: regulation of meristem structural organization	2.03E-03
47	GO:0070588: calcium ion transmembrane transport	2.19E-03
48	GO:0006071: glycerol metabolic process	2.36E-03
49	GO:0019344: cysteine biosynthetic process	2.52E-03
50	GO:0010026: trichome differentiation	2.70E-03
51	GO:0051302: regulation of cell division	2.70E-03
52	GO:0006457: protein folding	2.72E-03
53	GO:0080092: regulation of pollen tube growth	3.06E-03
54	GO:0009411: response to UV	3.24E-03
55	GO:0001944: vasculature development	3.24E-03
56	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	3.24E-03
57	GO:0019722: calcium-mediated signaling	3.43E-03
58	GO:0010089: xylem development	3.43E-03
59	GO:0000226: microtubule cytoskeleton organization	3.82E-03
60	GO:0000271: polysaccharide biosynthetic process	3.82E-03
61	GO:0010087: phloem or xylem histogenesis	3.82E-03
62	GO:0008360: regulation of cell shape	4.02E-03
63	GO:0009958: positive gravitropism	4.02E-03
64	GO:0019252: starch biosynthetic process	4.43E-03
65	GO:0010583: response to cyclopentenone	4.86E-03
66	GO:0009828: plant-type cell wall loosening	5.30E-03
67	GO:0016125: sterol metabolic process	5.30E-03
68	GO:0007267: cell-cell signaling	5.52E-03
69	GO:0045454: cell redox homeostasis	5.75E-03
70	GO:0000910: cytokinesis	5.75E-03
71	GO:0010027: thylakoid membrane organization	5.98E-03
72	GO:0016126: sterol biosynthetic process	5.98E-03
73	GO:0015995: chlorophyll biosynthetic process	6.69E-03
74	GO:0048481: plant ovule development	7.19E-03
75	GO:0030244: cellulose biosynthetic process	7.19E-03
76	GO:0009832: plant-type cell wall biogenesis	7.43E-03
77	GO:0016051: carbohydrate biosynthetic process	8.47E-03
78	GO:0030001: metal ion transport	9.28E-03
79	GO:0042542: response to hydrogen peroxide	9.83E-03
80	GO:0009734: auxin-activated signaling pathway	9.98E-03
81	GO:0008283: cell proliferation	1.01E-02
82	GO:0042546: cell wall biogenesis	1.04E-02
83	GO:0008643: carbohydrate transport	1.07E-02
84	GO:0009735: response to cytokinin	1.15E-02
85	GO:0009664: plant-type cell wall organization	1.19E-02
86	GO:0009585: red, far-red light phototransduction	1.25E-02
87	GO:0006813: potassium ion transport	1.25E-02
88	GO:0009793: embryo development ending in seed dormancy	1.39E-02
89	GO:0048367: shoot system development	1.44E-02
90	GO:0009790: embryo development	2.10E-02
91	GO:0006633: fatty acid biosynthetic process	2.21E-02
92	GO:0040008: regulation of growth	2.29E-02
93	GO:0045490: pectin catabolic process	2.36E-02
94	GO:0042742: defense response to bacterium	2.56E-02
95	GO:0009826: unidimensional cell growth	3.14E-02
96	GO:0042254: ribosome biogenesis	3.27E-02
97	GO:0006970: response to osmotic stress	3.40E-02
98	GO:0009860: pollen tube growth	3.40E-02
99	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.85E-02
100	GO:0016192: vesicle-mediated transport	3.89E-02
101	GO:0006869: lipid transport	4.56E-02
102	GO:0006629: lipid metabolic process	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0004496: mevalonate kinase activity	0.00E+00
2	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
3	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
4	GO:0004823: leucine-tRNA ligase activity	0.00E+00
5	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
6	GO:0002161: aminoacyl-tRNA editing activity	4.55E-07
7	GO:0051920: peroxiredoxin activity	8.18E-06
8	GO:0016209: antioxidant activity	1.51E-05
9	GO:0005089: Rho guanyl-nucleotide exchange factor activity	4.36E-05
10	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.75E-05
11	GO:0004812: aminoacyl-tRNA ligase activity	1.81E-04
12	GO:0030267: glyoxylate reductase (NADP) activity	1.84E-04
13	GO:0016149: translation release factor activity, codon specific	2.70E-04
14	GO:0004550: nucleoside diphosphate kinase activity	2.70E-04
15	GO:0008237: metallopeptidase activity	3.42E-04
16	GO:0046527: glucosyltransferase activity	3.64E-04
17	GO:0004222: metalloendopeptidase activity	5.47E-04
18	GO:0004747: ribokinase activity	6.76E-04
19	GO:0051753: mannan synthase activity	6.76E-04
20	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	6.76E-04
21	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	6.76E-04
22	GO:0043621: protein self-association	8.59E-04
23	GO:0008865: fructokinase activity	9.08E-04
24	GO:0046914: transition metal ion binding	1.03E-03
25	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.16E-03
26	GO:0003747: translation release factor activity	1.16E-03
27	GO:0000049: tRNA binding	1.72E-03
28	GO:0019843: rRNA binding	1.84E-03
29	GO:0005262: calcium channel activity	1.87E-03
30	GO:0008017: microtubule binding	2.64E-03
31	GO:0008324: cation transmembrane transporter activity	2.70E-03
32	GO:0004176: ATP-dependent peptidase activity	2.88E-03
33	GO:0033612: receptor serine/threonine kinase binding	2.88E-03
34	GO:0030570: pectate lyase activity	3.24E-03
35	GO:0016760: cellulose synthase (UDP-forming) activity	3.24E-03
36	GO:0008514: organic anion transmembrane transporter activity	3.43E-03
37	GO:0005102: receptor binding	3.63E-03
38	GO:0004601: peroxidase activity	3.88E-03
39	GO:0005199: structural constituent of cell wall	4.02E-03
40	GO:0016722: oxidoreductase activity, oxidizing metal ions	5.52E-03
41	GO:0005524: ATP binding	1.07E-02
42	GO:0003777: microtubule motor activity	1.34E-02
43	GO:0030599: pectinesterase activity	1.54E-02
44	GO:0008565: protein transporter activity	2.13E-02
45	GO:0046872: metal ion binding	2.90E-02
46	GO:0016491: oxidoreductase activity	3.36E-02
47	GO:0042803: protein homodimerization activity	4.41E-02
48	GO:0004871: signal transducer activity	4.41E-02
49	GO:0005515: protein binding	4.81E-02
50	GO:0003924: GTPase activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0070971: endoplasmic reticulum exit site	0.00E+00
2	GO:0009941: chloroplast envelope	6.22E-10
3	GO:0009570: chloroplast stroma	5.19E-08
4	GO:0009507: chloroplast	6.53E-07
5	GO:0046658: anchored component of plasma membrane	2.65E-05
6	GO:0031977: thylakoid lumen	3.99E-05
7	GO:0009579: thylakoid	4.29E-05
8	GO:0009547: plastid ribosome	4.31E-05
9	GO:0009535: chloroplast thylakoid membrane	1.05E-04
10	GO:0009543: chloroplast thylakoid lumen	1.66E-04
11	GO:0048046: apoplast	3.13E-04
12	GO:0009534: chloroplast thylakoid	3.94E-04
13	GO:0072686: mitotic spindle	4.63E-04
14	GO:0000793: condensed chromosome	5.67E-04
15	GO:0031225: anchored component of membrane	5.83E-04
16	GO:0005819: spindle	6.80E-04
17	GO:0000794: condensed nuclear chromosome	7.90E-04
18	GO:0009533: chloroplast stromal thylakoid	7.90E-04
19	GO:0000922: spindle pole	1.16E-03
20	GO:0009505: plant-type cell wall	1.21E-03
21	GO:0016324: apical plasma membrane	1.43E-03
22	GO:0055028: cortical microtubule	1.43E-03
23	GO:0009706: chloroplast inner membrane	1.48E-03
24	GO:0000311: plastid large ribosomal subunit	1.72E-03
25	GO:0009574: preprophase band	1.87E-03
26	GO:0000312: plastid small ribosomal subunit	2.03E-03
27	GO:0005875: microtubule associated complex	2.36E-03
28	GO:0019898: extrinsic component of membrane	4.43E-03
29	GO:0005874: microtubule	4.64E-03
30	GO:0010319: stromule	5.52E-03
31	GO:0009536: plastid	6.21E-03
32	GO:0010287: plastoglobule	1.81E-02
33	GO:0005623: cell	1.91E-02
34	GO:0009524: phragmoplast	1.95E-02
35	GO:0005886: plasma membrane	2.41E-02
36	GO:0005615: extracellular space	2.56E-02
37	GO:0022627: cytosolic small ribosomal subunit	2.88E-02
38	GO:0000139: Golgi membrane	3.46E-02
39	GO:0031969: chloroplast membrane	3.76E-02
40	GO:0009506: plasmodesma	4.15E-02