Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G61010

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006983: ER overload response0.00E+00
2GO:0033587: shikimate biosynthetic process0.00E+00
3GO:1900151: regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay0.00E+00
4GO:0015833: peptide transport0.00E+00
5GO:0035344: hypoxanthine transport3.12E-05
6GO:0060211: regulation of nuclear-transcribed mRNA poly(A) tail shortening3.12E-05
7GO:0051775: response to redox state3.12E-05
8GO:0098721: uracil import across plasma membrane3.12E-05
9GO:0098702: adenine import across plasma membrane3.12E-05
10GO:0098710: guanine import across plasma membrane3.12E-05
11GO:0010365: positive regulation of ethylene biosynthetic process3.12E-05
12GO:0009809: lignin biosynthetic process3.79E-05
13GO:0043066: negative regulation of apoptotic process7.88E-05
14GO:0015865: purine nucleotide transport7.88E-05
15GO:0042939: tripeptide transport7.88E-05
16GO:0010359: regulation of anion channel activity1.37E-04
17GO:0071786: endoplasmic reticulum tubular network organization2.04E-04
18GO:0000187: activation of MAPK activity2.04E-04
19GO:0070301: cellular response to hydrogen peroxide2.04E-04
20GO:0046902: regulation of mitochondrial membrane permeability2.04E-04
21GO:0042938: dipeptide transport2.76E-04
22GO:0006542: glutamine biosynthetic process2.76E-04
23GO:0048830: adventitious root development2.76E-04
24GO:0046777: protein autophosphorylation3.84E-04
25GO:0035435: phosphate ion transmembrane transport4.34E-04
26GO:1902456: regulation of stomatal opening4.34E-04
27GO:1900425: negative regulation of defense response to bacterium4.34E-04
28GO:0009759: indole glucosinolate biosynthetic process4.34E-04
29GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly4.34E-04
30GO:0048280: vesicle fusion with Golgi apparatus5.20E-04
31GO:2000037: regulation of stomatal complex patterning5.20E-04
32GO:0010114: response to red light5.38E-04
33GO:0010161: red light signaling pathway6.07E-04
34GO:1900150: regulation of defense response to fungus6.99E-04
35GO:0006096: glycolytic process8.40E-04
36GO:0006098: pentose-phosphate shunt8.92E-04
37GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay8.92E-04
38GO:0046686: response to cadmium ion8.95E-04
39GO:0006896: Golgi to vacuole transport1.10E-03
40GO:0006995: cellular response to nitrogen starvation1.10E-03
41GO:0043069: negative regulation of programmed cell death1.10E-03
42GO:0009641: shade avoidance1.10E-03
43GO:0009682: induced systemic resistance1.20E-03
44GO:0052544: defense response by callose deposition in cell wall1.20E-03
45GO:0043085: positive regulation of catalytic activity1.20E-03
46GO:0009684: indoleacetic acid biosynthetic process1.20E-03
47GO:0000038: very long-chain fatty acid metabolic process1.20E-03
48GO:0010229: inflorescence development1.43E-03
49GO:0006094: gluconeogenesis1.43E-03
50GO:0006446: regulation of translational initiation1.55E-03
51GO:0055085: transmembrane transport1.57E-03
52GO:0000162: tryptophan biosynthetic process1.79E-03
53GO:0035428: hexose transmembrane transport2.32E-03
54GO:0009814: defense response, incompatible interaction2.32E-03
55GO:0030433: ubiquitin-dependent ERAD pathway2.32E-03
56GO:0010227: floral organ abscission2.46E-03
57GO:0042147: retrograde transport, endosome to Golgi2.75E-03
58GO:0010154: fruit development3.05E-03
59GO:0046323: glucose import3.05E-03
60GO:0006814: sodium ion transport3.20E-03
61GO:0006623: protein targeting to vacuole3.36E-03
62GO:0006891: intra-Golgi vesicle-mediated transport3.51E-03
63GO:0016032: viral process3.68E-03
64GO:0009630: gravitropism3.68E-03
65GO:0042128: nitrate assimilation4.87E-03
66GO:0006888: ER to Golgi vesicle-mediated transport5.05E-03
67GO:0006499: N-terminal protein myristoylation5.79E-03
68GO:0010119: regulation of stomatal movement5.99E-03
69GO:0006839: mitochondrial transport6.98E-03
70GO:0042542: response to hydrogen peroxide7.39E-03
71GO:0009744: response to sucrose7.60E-03
72GO:0009738: abscisic acid-activated signaling pathway8.05E-03
73GO:0006855: drug transmembrane transport8.46E-03
74GO:0000165: MAPK cascade8.68E-03
75GO:0006812: cation transport8.91E-03
76GO:0055114: oxidation-reduction process9.15E-03
77GO:0006813: potassium ion transport9.36E-03
78GO:0010224: response to UV-B9.59E-03
79GO:0006468: protein phosphorylation1.01E-02
80GO:0048316: seed development1.08E-02
81GO:0009626: plant-type hypersensitive response1.10E-02
82GO:0018105: peptidyl-serine phosphorylation1.22E-02
83GO:0009742: brassinosteroid mediated signaling pathway1.25E-02
84GO:0006413: translational initiation1.68E-02
85GO:0040008: regulation of growth1.71E-02
86GO:0006470: protein dephosphorylation1.94E-02
87GO:0007166: cell surface receptor signaling pathway1.94E-02
88GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.88E-02
89GO:0016192: vesicle-mediated transport2.91E-02
90GO:0006886: intracellular protein transport3.27E-02
91GO:0007275: multicellular organism development3.33E-02
92GO:0009737: response to abscisic acid3.61E-02
93GO:0016042: lipid catabolic process3.63E-02
94GO:0009408: response to heat3.71E-02
RankGO TermAdjusted P value
1GO:0015197: peptide transporter activity0.00E+00
2GO:0015334: high-affinity oligopeptide transporter activity0.00E+00
3GO:0015370: solute:sodium symporter activity0.00E+00
4GO:0019211: phosphatase activator activity0.00E+00
5GO:0052747: sinapyl alcohol dehydrogenase activity8.99E-06
6GO:0045309: protein phosphorylated amino acid binding1.84E-05
7GO:0019904: protein domain specific binding2.68E-05
8GO:0015294: solute:cation symporter activity3.12E-05
9GO:0015207: adenine transmembrane transporter activity3.12E-05
10GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity3.12E-05
11GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity3.12E-05
12GO:0015208: guanine transmembrane transporter activity3.12E-05
13GO:0045551: cinnamyl-alcohol dehydrogenase activity3.17E-05
14GO:0015036: disulfide oxidoreductase activity7.88E-05
15GO:0042937: tripeptide transporter activity7.88E-05
16GO:0016805: dipeptidase activity1.37E-04
17GO:0005432: calcium:sodium antiporter activity2.04E-04
18GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity2.04E-04
19GO:0015204: urea transmembrane transporter activity2.76E-04
20GO:0042936: dipeptide transporter activity2.76E-04
21GO:0015210: uracil transmembrane transporter activity2.76E-04
22GO:0005471: ATP:ADP antiporter activity3.53E-04
23GO:0004356: glutamate-ammonia ligase activity3.53E-04
24GO:0036402: proteasome-activating ATPase activity4.34E-04
25GO:0005215: transporter activity5.34E-04
26GO:0008235: metalloexopeptidase activity6.07E-04
27GO:0015491: cation:cation antiporter activity6.99E-04
28GO:0004708: MAP kinase kinase activity6.99E-04
29GO:0045735: nutrient reservoir activity8.40E-04
30GO:0030955: potassium ion binding9.92E-04
31GO:0004743: pyruvate kinase activity9.92E-04
32GO:0004674: protein serine/threonine kinase activity1.15E-03
33GO:0004177: aminopeptidase activity1.20E-03
34GO:0005315: inorganic phosphate transmembrane transporter activity1.43E-03
35GO:0015297: antiporter activity1.61E-03
36GO:0017025: TBP-class protein binding1.67E-03
37GO:0005507: copper ion binding1.82E-03
38GO:0005355: glucose transmembrane transporter activity3.20E-03
39GO:0004872: receptor activity3.36E-03
40GO:0005524: ATP binding3.50E-03
41GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.17E-03
42GO:0009931: calcium-dependent protein serine/threonine kinase activity4.87E-03
43GO:0004683: calmodulin-dependent protein kinase activity5.05E-03
44GO:0015238: drug transmembrane transporter activity5.60E-03
45GO:0030145: manganese ion binding5.99E-03
46GO:0000149: SNARE binding6.77E-03
47GO:0050661: NADP binding6.98E-03
48GO:0016887: ATPase activity7.27E-03
49GO:0005484: SNAP receptor activity7.60E-03
50GO:0015293: symporter activity8.24E-03
51GO:0051287: NAD binding8.68E-03
52GO:0016301: kinase activity9.79E-03
53GO:0022857: transmembrane transporter activity1.15E-02
54GO:0005509: calcium ion binding1.56E-02
55GO:0015144: carbohydrate transmembrane transporter activity1.60E-02
56GO:0005351: sugar:proton symporter activity1.74E-02
57GO:0005515: protein binding1.86E-02
58GO:0003743: translation initiation factor activity1.97E-02
59GO:0016491: oxidoreductase activity2.23E-02
60GO:0000287: magnesium ion binding2.38E-02
61GO:0050660: flavin adenine dinucleotide binding2.67E-02
62GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.37E-02
63GO:0004722: protein serine/threonine phosphatase activity3.41E-02
64GO:0009055: electron carrier activity3.90E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.82E-06
2GO:0031314: extrinsic component of mitochondrial inner membrane7.88E-05
3GO:0005829: cytosol1.30E-04
4GO:0071782: endoplasmic reticulum tubular network2.04E-04
5GO:0016020: membrane3.46E-04
6GO:0000164: protein phosphatase type 1 complex3.53E-04
7GO:0000325: plant-type vacuole3.84E-04
8GO:0030140: trans-Golgi network transport vesicle4.34E-04
9GO:0031597: cytosolic proteasome complex5.20E-04
10GO:0031595: nuclear proteasome complex6.07E-04
11GO:0005774: vacuolar membrane6.23E-04
12GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane6.99E-04
13GO:0012507: ER to Golgi transport vesicle membrane6.99E-04
14GO:0005635: nuclear envelope7.65E-04
15GO:0005789: endoplasmic reticulum membrane8.70E-04
16GO:0008540: proteasome regulatory particle, base subcomplex9.92E-04
17GO:0005737: cytoplasm1.06E-03
18GO:0005740: mitochondrial envelope1.10E-03
19GO:0005783: endoplasmic reticulum2.11E-03
20GO:0005770: late endosome3.05E-03
21GO:0016021: integral component of membrane3.10E-03
22GO:0005794: Golgi apparatus3.20E-03
23GO:0016592: mediator complex3.68E-03
24GO:0005743: mitochondrial inner membrane4.38E-03
25GO:0009506: plasmodesma6.46E-03
26GO:0031902: late endosome membrane7.19E-03
27GO:0031201: SNARE complex7.19E-03
28GO:0009570: chloroplast stroma7.84E-03
29GO:0000502: proteasome complex9.36E-03
30GO:0005802: trans-Golgi network1.34E-02
31GO:0009705: plant-type vacuole membrane1.77E-02
32GO:0005773: vacuole2.35E-02
33GO:0005887: integral component of plasma membrane4.61E-02
Gene type



Gene DE type