GO Enrichment Analysis of Co-expressed Genes with
AT5G61000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006226: dUMP biosynthetic process | 0.00E+00 |
| 2 | GO:0046080: dUTP metabolic process | 0.00E+00 |
| 3 | GO:0031508: pericentric heterochromatin assembly | 0.00E+00 |
| 4 | GO:0009202: deoxyribonucleoside triphosphate biosynthetic process | 0.00E+00 |
| 5 | GO:0080094: response to trehalose-6-phosphate | 0.00E+00 |
| 6 | GO:0009394: 2'-deoxyribonucleotide metabolic process | 0.00E+00 |
| 7 | GO:0006269: DNA replication, synthesis of RNA primer | 1.52E-08 |
| 8 | GO:0010424: DNA methylation on cytosine within a CG sequence | 1.52E-08 |
| 9 | GO:0006458: 'de novo' protein folding | 1.15E-06 |
| 10 | GO:0042026: protein refolding | 1.15E-06 |
| 11 | GO:0006260: DNA replication | 5.19E-06 |
| 12 | GO:0010216: maintenance of DNA methylation | 6.90E-06 |
| 13 | GO:0006169: adenosine salvage | 1.30E-05 |
| 14 | GO:0061077: chaperone-mediated protein folding | 2.20E-05 |
| 15 | GO:0007005: mitochondrion organization | 2.46E-05 |
| 16 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 3.42E-05 |
| 17 | GO:0090309: positive regulation of methylation-dependent chromatin silencing | 3.42E-05 |
| 18 | GO:0006275: regulation of DNA replication | 6.16E-05 |
| 19 | GO:0032776: DNA methylation on cytosine | 6.16E-05 |
| 20 | GO:0042276: error-prone translesion synthesis | 6.16E-05 |
| 21 | GO:0070828: heterochromatin organization | 6.16E-05 |
| 22 | GO:0044209: AMP salvage | 1.68E-04 |
| 23 | GO:0000741: karyogamy | 2.10E-04 |
| 24 | GO:0051301: cell division | 3.29E-04 |
| 25 | GO:0016569: covalent chromatin modification | 3.31E-04 |
| 26 | GO:0006349: regulation of gene expression by genetic imprinting | 4.96E-04 |
| 27 | GO:0006325: chromatin organization | 5.49E-04 |
| 28 | GO:0009294: DNA mediated transformation | 1.21E-03 |
| 29 | GO:0010197: polar nucleus fusion | 1.48E-03 |
| 30 | GO:0006342: chromatin silencing | 1.48E-03 |
| 31 | GO:0007059: chromosome segregation | 1.56E-03 |
| 32 | GO:0016032: viral process | 1.78E-03 |
| 33 | GO:0009910: negative regulation of flower development | 2.87E-03 |
| 34 | GO:0051726: regulation of cell cycle | 5.89E-03 |
| 35 | GO:0009790: embryo development | 7.35E-03 |
| 36 | GO:0046686: response to cadmium ion | 8.84E-03 |
| 37 | GO:0009658: chloroplast organization | 1.12E-02 |
| 38 | GO:0007049: cell cycle | 1.21E-02 |
| 39 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.34E-02 |
| 40 | GO:0006281: DNA repair | 1.72E-02 |
| 41 | GO:0006457: protein folding | 3.11E-02 |
| 42 | GO:0006414: translational elongation | 3.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004170: dUTP diphosphatase activity | 0.00E+00 |
| 2 | GO:0003896: DNA primase activity | 1.52E-08 |
| 3 | GO:0044183: protein binding involved in protein folding | 6.90E-06 |
| 4 | GO:0030337: DNA polymerase processivity factor activity | 1.30E-05 |
| 5 | GO:0004001: adenosine kinase activity | 1.30E-05 |
| 6 | GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | 3.42E-05 |
| 7 | GO:0003682: chromatin binding | 5.97E-05 |
| 8 | GO:0010429: methyl-CpNpN binding | 6.16E-05 |
| 9 | GO:0010428: methyl-CpNpG binding | 6.16E-05 |
| 10 | GO:0010385: double-stranded methylated DNA binding | 1.30E-04 |
| 11 | GO:0003697: single-stranded DNA binding | 1.37E-04 |
| 12 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 2.53E-04 |
| 13 | GO:0003677: DNA binding | 2.80E-04 |
| 14 | GO:0051082: unfolded protein binding | 3.52E-04 |
| 15 | GO:0008327: methyl-CpG binding | 6.03E-04 |
| 16 | GO:0003887: DNA-directed DNA polymerase activity | 8.91E-04 |
| 17 | GO:0046982: protein heterodimerization activity | 8.91E-04 |
| 18 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.78E-03 |
| 19 | GO:0042393: histone binding | 3.33E-03 |
| 20 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.33E-03 |
| 21 | GO:0008017: microtubule binding | 8.53E-03 |
| 22 | GO:0042802: identical protein binding | 9.77E-03 |
| 23 | GO:0008168: methyltransferase activity | 1.09E-02 |
| 24 | GO:0000287: magnesium ion binding | 1.11E-02 |
| 25 | GO:0061630: ubiquitin protein ligase activity | 1.35E-02 |
| 26 | GO:0005524: ATP binding | 2.19E-02 |
| 27 | GO:0005507: copper ion binding | 3.33E-02 |
| 28 | GO:0008270: zinc ion binding | 4.16E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005721: pericentric heterochromatin | 0.00E+00 |
| 2 | GO:0000940: condensed chromosome outer kinetochore | 0.00E+00 |
| 3 | GO:0005658: alpha DNA polymerase:primase complex | 5.93E-08 |
| 4 | GO:0005971: ribonucleoside-diphosphate reductase complex | 1.30E-05 |
| 5 | GO:0000792: heterochromatin | 3.42E-05 |
| 6 | GO:0000786: nucleosome | 1.31E-04 |
| 7 | GO:0010369: chromocenter | 2.53E-04 |
| 8 | GO:0022626: cytosolic ribosome | 2.77E-04 |
| 9 | GO:0005634: nucleus | 2.91E-04 |
| 10 | GO:0005720: nuclear heterochromatin | 4.45E-04 |
| 11 | GO:0005876: spindle microtubule | 4.96E-04 |
| 12 | GO:0000790: nuclear chromatin | 1.34E-03 |
| 13 | GO:0009506: plasmodesma | 4.16E-03 |
| 14 | GO:0005730: nucleolus | 9.60E-03 |
| 15 | GO:0048046: apoplast | 2.07E-02 |
| 16 | GO:0009941: chloroplast envelope | 2.68E-02 |
| 17 | GO:0009579: thylakoid | 2.94E-02 |
| 18 | GO:0009570: chloroplast stroma | 3.74E-02 |
| 19 | GO:0005840: ribosome | 4.43E-02 |