GO Enrichment Analysis of Co-expressed Genes with
AT5G60390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 2 | GO:0019918: peptidyl-arginine methylation, to symmetrical-dimethyl arginine | 0.00E+00 |
| 3 | GO:0071433: cell wall repair | 0.00E+00 |
| 4 | GO:0006412: translation | 5.22E-23 |
| 5 | GO:0042254: ribosome biogenesis | 7.27E-11 |
| 6 | GO:0046686: response to cadmium ion | 8.90E-10 |
| 7 | GO:0000027: ribosomal large subunit assembly | 1.22E-07 |
| 8 | GO:0006458: 'de novo' protein folding | 1.99E-07 |
| 9 | GO:0045041: protein import into mitochondrial intermembrane space | 5.13E-07 |
| 10 | GO:0009651: response to salt stress | 5.92E-07 |
| 11 | GO:0002181: cytoplasmic translation | 1.95E-06 |
| 12 | GO:0044205: 'de novo' UMP biosynthetic process | 8.78E-06 |
| 13 | GO:0061077: chaperone-mediated protein folding | 1.31E-05 |
| 14 | GO:0007005: mitochondrion organization | 1.53E-05 |
| 15 | GO:0042026: protein refolding | 3.14E-05 |
| 16 | GO:0009423: chorismate biosynthetic process | 3.14E-05 |
| 17 | GO:0006526: arginine biosynthetic process | 7.06E-05 |
| 18 | GO:0006457: protein folding | 7.54E-05 |
| 19 | GO:0006900: membrane budding | 9.88E-05 |
| 20 | GO:1990258: histone glutamine methylation | 9.88E-05 |
| 21 | GO:0018920: glyphosate metabolic process | 9.88E-05 |
| 22 | GO:1990542: mitochondrial transmembrane transport | 9.88E-05 |
| 23 | GO:0000494: box C/D snoRNA 3'-end processing | 9.88E-05 |
| 24 | GO:0009073: aromatic amino acid family biosynthetic process | 1.48E-04 |
| 25 | GO:0006820: anion transport | 1.72E-04 |
| 26 | GO:0006626: protein targeting to mitochondrion | 1.98E-04 |
| 27 | GO:0015865: purine nucleotide transport | 2.32E-04 |
| 28 | GO:0006432: phenylalanyl-tRNA aminoacylation | 2.32E-04 |
| 29 | GO:0010220: positive regulation of vernalization response | 2.32E-04 |
| 30 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 2.32E-04 |
| 31 | GO:0055129: L-proline biosynthetic process | 2.32E-04 |
| 32 | GO:0009735: response to cytokinin | 2.47E-04 |
| 33 | GO:0006591: ornithine metabolic process | 3.86E-04 |
| 34 | GO:0008652: cellular amino acid biosynthetic process | 3.86E-04 |
| 35 | GO:0055074: calcium ion homeostasis | 3.86E-04 |
| 36 | GO:0006954: inflammatory response | 3.86E-04 |
| 37 | GO:1902626: assembly of large subunit precursor of preribosome | 3.86E-04 |
| 38 | GO:0046902: regulation of mitochondrial membrane permeability | 5.54E-04 |
| 39 | GO:0051131: chaperone-mediated protein complex assembly | 5.54E-04 |
| 40 | GO:0015696: ammonium transport | 5.54E-04 |
| 41 | GO:0006520: cellular amino acid metabolic process | 6.24E-04 |
| 42 | GO:0072488: ammonium transmembrane transport | 7.37E-04 |
| 43 | GO:0071493: cellular response to UV-B | 9.32E-04 |
| 44 | GO:0031167: rRNA methylation | 9.32E-04 |
| 45 | GO:0006561: proline biosynthetic process | 1.14E-03 |
| 46 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.36E-03 |
| 47 | GO:0009088: threonine biosynthetic process | 1.36E-03 |
| 48 | GO:0009955: adaxial/abaxial pattern specification | 1.36E-03 |
| 49 | GO:1901001: negative regulation of response to salt stress | 1.36E-03 |
| 50 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 1.59E-03 |
| 51 | GO:0010043: response to zinc ion | 1.61E-03 |
| 52 | GO:0009853: photorespiration | 1.77E-03 |
| 53 | GO:0000028: ribosomal small subunit assembly | 1.84E-03 |
| 54 | GO:0001510: RNA methylation | 2.10E-03 |
| 55 | GO:0006189: 'de novo' IMP biosynthetic process | 2.37E-03 |
| 56 | GO:0098656: anion transmembrane transport | 2.37E-03 |
| 57 | GO:0010162: seed dormancy process | 2.95E-03 |
| 58 | GO:0006364: rRNA processing | 3.04E-03 |
| 59 | GO:0006913: nucleocytoplasmic transport | 3.25E-03 |
| 60 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.25E-03 |
| 61 | GO:0009408: response to heat | 3.80E-03 |
| 62 | GO:0048467: gynoecium development | 4.22E-03 |
| 63 | GO:0009793: embryo development ending in seed dormancy | 4.48E-03 |
| 64 | GO:0030150: protein import into mitochondrial matrix | 5.28E-03 |
| 65 | GO:0009944: polarity specification of adaxial/abaxial axis | 5.28E-03 |
| 66 | GO:0015992: proton transport | 6.03E-03 |
| 67 | GO:0030433: ubiquitin-dependent ERAD pathway | 6.42E-03 |
| 68 | GO:0015031: protein transport | 6.55E-03 |
| 69 | GO:0009294: DNA mediated transformation | 6.82E-03 |
| 70 | GO:0006413: translational initiation | 6.92E-03 |
| 71 | GO:0016036: cellular response to phosphate starvation | 6.92E-03 |
| 72 | GO:0051028: mRNA transport | 7.64E-03 |
| 73 | GO:0008033: tRNA processing | 8.07E-03 |
| 74 | GO:0000413: protein peptidyl-prolyl isomerization | 8.07E-03 |
| 75 | GO:0010197: polar nucleus fusion | 8.50E-03 |
| 76 | GO:0080156: mitochondrial mRNA modification | 9.85E-03 |
| 77 | GO:0032502: developmental process | 1.03E-02 |
| 78 | GO:0006414: translational elongation | 1.31E-02 |
| 79 | GO:0016049: cell growth | 1.49E-02 |
| 80 | GO:0006811: ion transport | 1.65E-02 |
| 81 | GO:0048527: lateral root development | 1.71E-02 |
| 82 | GO:0008283: cell proliferation | 2.18E-02 |
| 83 | GO:0000154: rRNA modification | 2.37E-02 |
| 84 | GO:0009965: leaf morphogenesis | 2.37E-02 |
| 85 | GO:0009909: regulation of flower development | 2.90E-02 |
| 86 | GO:0006810: transport | 3.11E-02 |
| 87 | GO:0016569: covalent chromatin modification | 3.32E-02 |
| 88 | GO:0009624: response to nematode | 3.47E-02 |
| 89 | GO:0055085: transmembrane transport | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004735: pyrroline-5-carboxylate reductase activity | 0.00E+00 |
| 2 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 3 | GO:0004070: aspartate carbamoyltransferase activity | 0.00E+00 |
| 4 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 5 | GO:0004585: ornithine carbamoyltransferase activity | 0.00E+00 |
| 6 | GO:0003735: structural constituent of ribosome | 2.82E-31 |
| 7 | GO:0051082: unfolded protein binding | 1.65E-09 |
| 8 | GO:0003729: mRNA binding | 9.99E-09 |
| 9 | GO:0016743: carboxyl- or carbamoyltransferase activity | 5.13E-07 |
| 10 | GO:0044183: protein binding involved in protein folding | 2.59E-06 |
| 11 | GO:0003723: RNA binding | 2.74E-05 |
| 12 | GO:0030515: snoRNA binding | 4.27E-05 |
| 13 | GO:0015288: porin activity | 5.57E-05 |
| 14 | GO:0016597: amino acid binding | 6.81E-05 |
| 15 | GO:0008308: voltage-gated anion channel activity | 7.06E-05 |
| 16 | GO:0005507: copper ion binding | 9.50E-05 |
| 17 | GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity | 9.88E-05 |
| 18 | GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity | 9.88E-05 |
| 19 | GO:1990259: histone-glutamine methyltransferase activity | 9.88E-05 |
| 20 | GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity | 9.88E-05 |
| 21 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 9.88E-05 |
| 22 | GO:0004826: phenylalanine-tRNA ligase activity | 2.32E-04 |
| 23 | GO:0008649: rRNA methyltransferase activity | 3.86E-04 |
| 24 | GO:0070180: large ribosomal subunit rRNA binding | 3.86E-04 |
| 25 | GO:0008469: histone-arginine N-methyltransferase activity | 3.86E-04 |
| 26 | GO:0008097: 5S rRNA binding | 5.54E-04 |
| 27 | GO:0017077: oxidative phosphorylation uncoupler activity | 5.54E-04 |
| 28 | GO:0004072: aspartate kinase activity | 5.54E-04 |
| 29 | GO:0008276: protein methyltransferase activity | 5.54E-04 |
| 30 | GO:0005471: ATP:ADP antiporter activity | 9.32E-04 |
| 31 | GO:0008519: ammonium transmembrane transporter activity | 1.14E-03 |
| 32 | GO:0004017: adenylate kinase activity | 1.36E-03 |
| 33 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.40E-03 |
| 34 | GO:0003746: translation elongation factor activity | 1.77E-03 |
| 35 | GO:0008135: translation factor activity, RNA binding | 2.10E-03 |
| 36 | GO:0005524: ATP binding | 2.17E-03 |
| 37 | GO:0001056: RNA polymerase III activity | 3.57E-03 |
| 38 | GO:0000049: tRNA binding | 3.57E-03 |
| 39 | GO:0015266: protein channel activity | 3.89E-03 |
| 40 | GO:0004089: carbonate dehydratase activity | 3.89E-03 |
| 41 | GO:0004407: histone deacetylase activity | 5.28E-03 |
| 42 | GO:0019843: rRNA binding | 5.38E-03 |
| 43 | GO:0004540: ribonuclease activity | 6.03E-03 |
| 44 | GO:0004298: threonine-type endopeptidase activity | 6.03E-03 |
| 45 | GO:0003743: translation initiation factor activity | 8.68E-03 |
| 46 | GO:0010181: FMN binding | 8.94E-03 |
| 47 | GO:0005525: GTP binding | 1.48E-02 |
| 48 | GO:0050897: cobalt ion binding | 1.71E-02 |
| 49 | GO:0005509: calcium ion binding | 1.74E-02 |
| 50 | GO:0003697: single-stranded DNA binding | 1.82E-02 |
| 51 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.44E-02 |
| 52 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.70E-02 |
| 53 | GO:0000166: nucleotide binding | 3.75E-02 |
| 54 | GO:0005515: protein binding | 4.65E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0022626: cytosolic ribosome | 7.79E-29 |
| 3 | GO:0005730: nucleolus | 6.98E-23 |
| 4 | GO:0022625: cytosolic large ribosomal subunit | 8.06E-22 |
| 5 | GO:0005840: ribosome | 1.85E-20 |
| 6 | GO:0005829: cytosol | 1.25E-13 |
| 7 | GO:0005737: cytoplasm | 5.77E-12 |
| 8 | GO:0015934: large ribosomal subunit | 3.79E-11 |
| 9 | GO:0005774: vacuolar membrane | 4.71E-11 |
| 10 | GO:0009506: plasmodesma | 5.79E-09 |
| 11 | GO:0005773: vacuole | 8.72E-09 |
| 12 | GO:0005788: endoplasmic reticulum lumen | 2.64E-06 |
| 13 | GO:0022627: cytosolic small ribosomal subunit | 1.66E-05 |
| 14 | GO:0031428: box C/D snoRNP complex | 2.21E-05 |
| 15 | GO:0005742: mitochondrial outer membrane translocase complex | 7.06E-05 |
| 16 | GO:0046930: pore complex | 7.06E-05 |
| 17 | GO:0005739: mitochondrion | 7.16E-05 |
| 18 | GO:0005951: carbamoyl-phosphate synthase complex | 9.88E-05 |
| 19 | GO:0009507: chloroplast | 1.19E-04 |
| 20 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.48E-04 |
| 21 | GO:0016020: membrane | 1.57E-04 |
| 22 | GO:0032040: small-subunit processome | 1.72E-04 |
| 23 | GO:0005618: cell wall | 2.75E-04 |
| 24 | GO:0005741: mitochondrial outer membrane | 3.84E-04 |
| 25 | GO:0005747: mitochondrial respiratory chain complex I | 4.29E-04 |
| 26 | GO:0005743: mitochondrial inner membrane | 5.92E-04 |
| 27 | GO:0005762: mitochondrial large ribosomal subunit | 1.36E-03 |
| 28 | GO:0019773: proteasome core complex, alpha-subunit complex | 2.10E-03 |
| 29 | GO:0005666: DNA-directed RNA polymerase III complex | 2.65E-03 |
| 30 | GO:0015030: Cajal body | 2.65E-03 |
| 31 | GO:0005740: mitochondrial envelope | 2.95E-03 |
| 32 | GO:0009570: chloroplast stroma | 3.02E-03 |
| 33 | GO:0005635: nuclear envelope | 3.25E-03 |
| 34 | GO:0048471: perinuclear region of cytoplasm | 3.25E-03 |
| 35 | GO:0005758: mitochondrial intermembrane space | 5.28E-03 |
| 36 | GO:0045271: respiratory chain complex I | 5.65E-03 |
| 37 | GO:0005839: proteasome core complex | 6.03E-03 |
| 38 | GO:0005759: mitochondrial matrix | 6.76E-03 |
| 39 | GO:0016592: mediator complex | 1.03E-02 |
| 40 | GO:0005783: endoplasmic reticulum | 1.04E-02 |
| 41 | GO:0005643: nuclear pore | 1.54E-02 |
| 42 | GO:0005886: plasma membrane | 2.22E-02 |
| 43 | GO:0031966: mitochondrial membrane | 2.57E-02 |
| 44 | GO:0000502: proteasome complex | 2.70E-02 |
| 45 | GO:0005834: heterotrimeric G-protein complex | 3.18E-02 |
| 46 | GO:0009941: chloroplast envelope | 4.57E-02 |