co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G59950

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045048: protein insertion into ER membrane	0.00E+00
2	GO:0006480: N-terminal protein amino acid methylation	0.00E+00
3	GO:0090630: activation of GTPase activity	5.64E-07
4	GO:0035494: SNARE complex disassembly	4.88E-05
5	GO:0031338: regulation of vesicle fusion	4.88E-05
6	GO:1990641: response to iron ion starvation	4.88E-05
7	GO:0006101: citrate metabolic process	1.20E-04
8	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	1.20E-04
9	GO:0007584: response to nutrient	1.20E-04
10	GO:0048544: recognition of pollen	2.70E-04
11	GO:0009113: purine nucleobase biosynthetic process	3.01E-04
12	GO:0010107: potassium ion import	4.04E-04
13	GO:0010483: pollen tube reception	4.04E-04
14	GO:0006085: acetyl-CoA biosynthetic process	4.04E-04
15	GO:0001666: response to hypoxia	4.48E-04
16	GO:0030308: negative regulation of cell growth	5.13E-04
17	GO:0048767: root hair elongation	6.09E-04
18	GO:0009723: response to ethylene	6.68E-04
19	GO:0006099: tricarboxylic acid cycle	7.60E-04
20	GO:0006333: chromatin assembly or disassembly	8.75E-04
21	GO:0010044: response to aluminum ion	8.75E-04
22	GO:0071669: plant-type cell wall organization or biogenesis	8.75E-04
23	GO:0009396: folic acid-containing compound biosynthetic process	8.75E-04
24	GO:0006886: intracellular protein transport	9.45E-04
25	GO:0006102: isocitrate metabolic process	1.01E-03
26	GO:0009061: anaerobic respiration	1.01E-03
27	GO:0007338: single fertilization	1.28E-03
28	GO:0008202: steroid metabolic process	1.43E-03
29	GO:0035999: tetrahydrofolate interconversion	1.43E-03
30	GO:0009873: ethylene-activated signaling pathway	1.61E-03
31	GO:0006820: anion transport	1.91E-03
32	GO:0035556: intracellular signal transduction	2.58E-03
33	GO:0034976: response to endoplasmic reticulum stress	2.62E-03
34	GO:0006825: copper ion transport	3.01E-03
35	GO:0016575: histone deacetylation	3.01E-03
36	GO:0010227: floral organ abscission	3.61E-03
37	GO:0000271: polysaccharide biosynthetic process	4.26E-03
38	GO:0080022: primary root development	4.26E-03
39	GO:0010051: xylem and phloem pattern formation	4.26E-03
40	GO:0010118: stomatal movement	4.26E-03
41	GO:0010182: sugar mediated signaling pathway	4.48E-03
42	GO:0009741: response to brassinosteroid	4.48E-03
43	GO:0061025: membrane fusion	4.71E-03
44	GO:0006623: protein targeting to vacuole	4.94E-03
45	GO:0009791: post-embryonic development	4.94E-03
46	GO:0006635: fatty acid beta-oxidation	5.18E-03
47	GO:0007264: small GTPase mediated signal transduction	5.42E-03
48	GO:0071281: cellular response to iron ion	5.66E-03
49	GO:0046777: protein autophosphorylation	6.02E-03
50	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	6.94E-03
51	GO:0006468: protein phosphorylation	7.06E-03
52	GO:0006950: response to stress	7.48E-03
53	GO:0030244: cellulose biosynthetic process	8.03E-03
54	GO:0009832: plant-type cell wall biogenesis	8.31E-03
55	GO:0006499: N-terminal protein myristoylation	8.60E-03
56	GO:0048364: root development	8.67E-03
57	GO:0010119: regulation of stomatal movement	8.88E-03
58	GO:0006897: endocytosis	1.07E-02
59	GO:0009738: abscisic acid-activated signaling pathway	1.43E-02
60	GO:0006857: oligopeptide transport	1.47E-02
61	GO:0048367: shoot system development	1.61E-02
62	GO:0018105: peptidyl-serine phosphorylation	1.83E-02
63	GO:0009742: brassinosteroid mediated signaling pathway	1.87E-02
64	GO:0009790: embryo development	2.35E-02
65	GO:0006633: fatty acid biosynthetic process	2.47E-02
66	GO:0006470: protein dephosphorylation	2.91E-02
67	GO:0006970: response to osmotic stress	3.81E-02
68	GO:0048366: leaf development	4.06E-02
69	GO:0080167: response to karrikin	4.21E-02
70	GO:0006810: transport	4.39E-02
71	GO:0044550: secondary metabolite biosynthetic process	4.47E-02
72	GO:0045454: cell redox homeostasis	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
2	GO:0035671: enone reductase activity	4.88E-05
3	GO:0004329: formate-tetrahydrofolate ligase activity	1.20E-04
4	GO:0003994: aconitate hydratase activity	1.20E-04
5	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	1.20E-04
6	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	1.20E-04
7	GO:0005483: soluble NSF attachment protein activity	2.06E-04
8	GO:0019829: cation-transporting ATPase activity	2.06E-04
9	GO:0004108: citrate (Si)-synthase activity	3.01E-04
10	GO:0030527: structural constituent of chromatin	3.01E-04
11	GO:0003878: ATP citrate synthase activity	3.01E-04
12	GO:0048027: mRNA 5'-UTR binding	3.01E-04
13	GO:0016004: phospholipase activator activity	4.04E-04
14	GO:0004737: pyruvate decarboxylase activity	4.04E-04
15	GO:0019905: syntaxin binding	4.04E-04
16	GO:0002020: protease binding	5.13E-04
17	GO:0017137: Rab GTPase binding	5.13E-04
18	GO:0005096: GTPase activator activity	6.09E-04
19	GO:0030976: thiamine pyrophosphate binding	6.29E-04
20	GO:0051753: mannan synthase activity	7.50E-04
21	GO:0070300: phosphatidic acid binding	7.50E-04
22	GO:0016831: carboxy-lyase activity	8.75E-04
23	GO:0016301: kinase activity	8.98E-04
24	GO:0005267: potassium channel activity	1.14E-03
25	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	1.14E-03
26	GO:0005375: copper ion transmembrane transporter activity	1.14E-03
27	GO:0000976: transcription regulatory region sequence-specific DNA binding	1.91E-03
28	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.08E-03
29	GO:0005524: ATP binding	2.69E-03
30	GO:0004407: histone deacetylase activity	2.81E-03
31	GO:0043424: protein histidine kinase binding	3.01E-03
32	GO:0019706: protein-cysteine S-palmitoyltransferase activity	3.20E-03
33	GO:0016760: cellulose synthase (UDP-forming) activity	3.61E-03
34	GO:0005507: copper ion binding	3.77E-03
35	GO:0003756: protein disulfide isomerase activity	3.82E-03
36	GO:0030276: clathrin binding	4.48E-03
37	GO:0003682: chromatin binding	4.81E-03
38	GO:0016759: cellulose synthase activity	5.91E-03
39	GO:0009931: calcium-dependent protein serine/threonine kinase activity	7.20E-03
40	GO:0004683: calmodulin-dependent protein kinase activity	7.48E-03
41	GO:0050897: cobalt ion binding	8.88E-03
42	GO:0051539: 4 iron, 4 sulfur cluster binding	1.04E-02
43	GO:0043621: protein self-association	1.20E-02
44	GO:0031625: ubiquitin protein ligase binding	1.50E-02
45	GO:0016874: ligase activity	1.72E-02
46	GO:0030246: carbohydrate binding	1.99E-02
47	GO:0005516: calmodulin binding	2.23E-02
48	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.14E-02
49	GO:0005215: transporter activity	3.32E-02
50	GO:0000287: magnesium ion binding	3.56E-02
51	GO:0046982: protein heterodimerization activity	3.56E-02
52	GO:0050660: flavin adenine dinucleotide binding	4.01E-02
53	GO:0004674: protein serine/threonine kinase activity	4.37E-02
54	GO:0004672: protein kinase activity	4.39E-02

Rank	GO Term	Adjusted P value
1	GO:0043680: filiform apparatus	0.00E+00
2	GO:0009346: citrate lyase complex	3.01E-04
3	GO:0005794: Golgi apparatus	3.10E-04
4	GO:0005829: cytosol	3.38E-04
5	GO:0005886: plasma membrane	3.61E-04
6	GO:0030173: integral component of Golgi membrane	7.50E-04
7	GO:0030131: clathrin adaptor complex	1.01E-03
8	GO:0030125: clathrin vesicle coat	1.59E-03
9	GO:0005884: actin filament	1.75E-03
10	GO:0005905: clathrin-coated pit	3.20E-03
11	GO:0016021: integral component of membrane	3.57E-03
12	GO:0030136: clathrin-coated vesicle	4.04E-03
13	GO:0005802: trans-Golgi network	4.37E-03
14	GO:0005770: late endosome	4.48E-03
15	GO:0005768: endosome	5.15E-03
16	GO:0016020: membrane	5.30E-03
17	GO:0000785: chromatin	5.42E-03
18	GO:0009506: plasmodesma	5.67E-03
19	GO:0000786: nucleosome	9.17E-03
20	GO:0031201: SNARE complex	1.07E-02
21	GO:0005773: vacuole	1.37E-02
22	GO:0012505: endomembrane system	1.76E-02
23	GO:0005783: endoplasmic reticulum	2.07E-02
24	GO:0009705: plant-type vacuole membrane	2.65E-02
25	GO:0005774: vacuolar membrane	2.83E-02