Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G59800

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901038: cyanidin 3-O-glucoside metabolic process0.00E+00
2GO:0009718: anthocyanin-containing compound biosynthetic process6.09E-08
3GO:0051555: flavonol biosynthetic process7.72E-06
4GO:0048438: floral whorl development1.57E-05
5GO:0031539: positive regulation of anthocyanin metabolic process1.57E-05
6GO:0009411: response to UV3.64E-05
7GO:1900386: positive regulation of flavonol biosynthetic process4.12E-05
8GO:0071395: cellular response to jasmonic acid stimulus4.12E-05
9GO:0010220: positive regulation of vernalization response4.12E-05
10GO:0045489: pectin biosynthetic process5.29E-05
11GO:0010581: regulation of starch biosynthetic process7.34E-05
12GO:0010253: UDP-rhamnose biosynthetic process7.34E-05
13GO:0009963: positive regulation of flavonoid biosynthetic process1.11E-04
14GO:0009813: flavonoid biosynthetic process1.45E-04
15GO:0071368: cellular response to cytokinin stimulus1.98E-04
16GO:0042732: D-xylose metabolic process2.47E-04
17GO:0010315: auxin efflux2.47E-04
18GO:0000060: protein import into nucleus, translocation2.47E-04
19GO:0010077: maintenance of inflorescence meristem identity2.97E-04
20GO:0010076: maintenance of floral meristem identity2.97E-04
21GO:0010224: response to UV-B3.24E-04
22GO:0009787: regulation of abscisic acid-activated signaling pathway4.04E-04
23GO:0010099: regulation of photomorphogenesis4.60E-04
24GO:0009698: phenylpropanoid metabolic process7.00E-04
25GO:0010582: floral meristem determinacy7.65E-04
26GO:0016925: protein sumoylation7.65E-04
27GO:0009225: nucleotide-sugar metabolic process9.64E-04
28GO:0071555: cell wall organization9.65E-04
29GO:0042753: positive regulation of circadian rhythm1.03E-03
30GO:0030154: cell differentiation1.07E-03
31GO:0010017: red or far-red light signaling pathway1.33E-03
32GO:0080167: response to karrikin1.39E-03
33GO:0040007: growth1.40E-03
34GO:0010584: pollen exine formation1.48E-03
35GO:0042127: regulation of cell proliferation1.48E-03
36GO:0000271: polysaccharide biosynthetic process1.65E-03
37GO:0009958: positive gravitropism1.73E-03
38GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.99E-03
39GO:0009607: response to biotic stimulus2.65E-03
40GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.65E-03
41GO:0010411: xyloglucan metabolic process2.84E-03
42GO:0010218: response to far red light3.25E-03
43GO:0016051: carbohydrate biosynthetic process3.58E-03
44GO:0045893: positive regulation of transcription, DNA-templated4.09E-03
45GO:0010114: response to red light4.25E-03
46GO:0009640: photomorphogenesis4.25E-03
47GO:0042546: cell wall biogenesis4.37E-03
48GO:0031347: regulation of defense response4.84E-03
49GO:0000165: MAPK cascade4.84E-03
50GO:0009809: lignin biosynthetic process5.21E-03
51GO:0009585: red, far-red light phototransduction5.21E-03
52GO:0009740: gibberellic acid mediated signaling pathway6.38E-03
53GO:0009739: response to gibberellin1.05E-02
54GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.25E-02
55GO:0009860: pollen tube growth1.39E-02
56GO:0009737: response to abscisic acid1.54E-02
57GO:0044550: secondary metabolite biosynthetic process1.63E-02
58GO:0045454: cell redox homeostasis1.75E-02
59GO:0016042: lipid catabolic process1.99E-02
60GO:0055114: oxidation-reduction process2.14E-02
61GO:0008152: metabolic process2.18E-02
62GO:0006357: regulation of transcription from RNA polymerase II promoter2.48E-02
63GO:0009416: response to light stimulus3.06E-02
RankGO TermAdjusted P value
1GO:0047890: flavanone 4-reductase activity0.00E+00
2GO:0016711: flavonoid 3'-monooxygenase activity0.00E+00
3GO:0045552: dihydrokaempferol 4-reductase activity0.00E+00
4GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity0.00E+00
5GO:0004566: beta-glucuronidase activity4.12E-05
6GO:0008460: dTDP-glucose 4,6-dehydratase activity4.12E-05
7GO:0010280: UDP-L-rhamnose synthase activity4.12E-05
8GO:0050377: UDP-glucose 4,6-dehydratase activity4.12E-05
9GO:0050736: O-malonyltransferase activity4.12E-05
10GO:0016798: hydrolase activity, acting on glycosyl bonds1.23E-04
11GO:0045430: chalcone isomerase activity1.53E-04
12GO:0031386: protein tag1.98E-04
13GO:0035252: UDP-xylosyltransferase activity2.47E-04
14GO:0016621: cinnamoyl-CoA reductase activity3.49E-04
15GO:0016207: 4-coumarate-CoA ligase activity5.18E-04
16GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding6.24E-04
17GO:0046982: protein heterodimerization activity1.11E-03
18GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.33E-03
19GO:0016853: isomerase activity1.82E-03
20GO:0050662: coenzyme binding1.82E-03
21GO:0016762: xyloglucan:xyloglucosyl transferase activity1.99E-03
22GO:0016740: transferase activity4.34E-03
23GO:0003690: double-stranded DNA binding5.34E-03
24GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups5.98E-03
25GO:0080043: quercetin 3-O-glucosyltransferase activity6.24E-03
26GO:0080044: quercetin 7-O-glucosyltransferase activity6.24E-03
27GO:0016874: ligase activity6.38E-03
28GO:0015035: protein disulfide oxidoreductase activity6.78E-03
29GO:0043565: sequence-specific DNA binding7.50E-03
30GO:0016758: transferase activity, transferring hexosyl groups7.62E-03
31GO:0016788: hydrolase activity, acting on ester bonds1.34E-02
32GO:0052689: carboxylic ester hydrolase activity1.65E-02
33GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.75E-02
34GO:0042803: protein homodimerization activity1.81E-02
35GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.89E-02
36GO:0009055: electron carrier activity2.14E-02
37GO:0016757: transferase activity, transferring glycosyl groups2.46E-02
38GO:0016887: ATPase activity2.78E-02
39GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.73E-02
40GO:0019825: oxygen binding3.94E-02
41GO:0003700: transcription factor activity, sequence-specific DNA binding4.97E-02
42GO:0005506: iron ion binding5.00E-02
RankGO TermAdjusted P value
1GO:0042406: extrinsic component of endoplasmic reticulum membrane7.34E-05
2GO:0005765: lysosomal membrane7.00E-04
3GO:0000786: nucleosome3.47E-03
4GO:0000139: Golgi membrane9.73E-03
5GO:0043231: intracellular membrane-bounded organelle2.18E-02
6GO:0005802: trans-Golgi network4.28E-02
7GO:0005768: endosome4.69E-02
Gene type



Gene DE type