co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G59800

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901038: cyanidin 3-O-glucoside metabolic process	0.00E+00
2	GO:0009718: anthocyanin-containing compound biosynthetic process	6.09E-08
3	GO:0051555: flavonol biosynthetic process	7.72E-06
4	GO:0048438: floral whorl development	1.57E-05
5	GO:0031539: positive regulation of anthocyanin metabolic process	1.57E-05
6	GO:0009411: response to UV	3.64E-05
7	GO:1900386: positive regulation of flavonol biosynthetic process	4.12E-05
8	GO:0071395: cellular response to jasmonic acid stimulus	4.12E-05
9	GO:0010220: positive regulation of vernalization response	4.12E-05
10	GO:0045489: pectin biosynthetic process	5.29E-05
11	GO:0010581: regulation of starch biosynthetic process	7.34E-05
12	GO:0010253: UDP-rhamnose biosynthetic process	7.34E-05
13	GO:0009963: positive regulation of flavonoid biosynthetic process	1.11E-04
14	GO:0009813: flavonoid biosynthetic process	1.45E-04
15	GO:0071368: cellular response to cytokinin stimulus	1.98E-04
16	GO:0042732: D-xylose metabolic process	2.47E-04
17	GO:0010315: auxin efflux	2.47E-04
18	GO:0000060: protein import into nucleus, translocation	2.47E-04
19	GO:0010077: maintenance of inflorescence meristem identity	2.97E-04
20	GO:0010076: maintenance of floral meristem identity	2.97E-04
21	GO:0010224: response to UV-B	3.24E-04
22	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.04E-04
23	GO:0010099: regulation of photomorphogenesis	4.60E-04
24	GO:0009698: phenylpropanoid metabolic process	7.00E-04
25	GO:0010582: floral meristem determinacy	7.65E-04
26	GO:0016925: protein sumoylation	7.65E-04
27	GO:0009225: nucleotide-sugar metabolic process	9.64E-04
28	GO:0071555: cell wall organization	9.65E-04
29	GO:0042753: positive regulation of circadian rhythm	1.03E-03
30	GO:0030154: cell differentiation	1.07E-03
31	GO:0010017: red or far-red light signaling pathway	1.33E-03
32	GO:0080167: response to karrikin	1.39E-03
33	GO:0040007: growth	1.40E-03
34	GO:0010584: pollen exine formation	1.48E-03
35	GO:0042127: regulation of cell proliferation	1.48E-03
36	GO:0000271: polysaccharide biosynthetic process	1.65E-03
37	GO:0009958: positive gravitropism	1.73E-03
38	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.99E-03
39	GO:0009607: response to biotic stimulus	2.65E-03
40	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.65E-03
41	GO:0010411: xyloglucan metabolic process	2.84E-03
42	GO:0010218: response to far red light	3.25E-03
43	GO:0016051: carbohydrate biosynthetic process	3.58E-03
44	GO:0045893: positive regulation of transcription, DNA-templated	4.09E-03
45	GO:0010114: response to red light	4.25E-03
46	GO:0009640: photomorphogenesis	4.25E-03
47	GO:0042546: cell wall biogenesis	4.37E-03
48	GO:0031347: regulation of defense response	4.84E-03
49	GO:0000165: MAPK cascade	4.84E-03
50	GO:0009809: lignin biosynthetic process	5.21E-03
51	GO:0009585: red, far-red light phototransduction	5.21E-03
52	GO:0009740: gibberellic acid mediated signaling pathway	6.38E-03
53	GO:0009739: response to gibberellin	1.05E-02
54	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	1.25E-02
55	GO:0009860: pollen tube growth	1.39E-02
56	GO:0009737: response to abscisic acid	1.54E-02
57	GO:0044550: secondary metabolite biosynthetic process	1.63E-02
58	GO:0045454: cell redox homeostasis	1.75E-02
59	GO:0016042: lipid catabolic process	1.99E-02
60	GO:0055114: oxidation-reduction process	2.14E-02
61	GO:0008152: metabolic process	2.18E-02
62	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.48E-02
63	GO:0009416: response to light stimulus	3.06E-02

Rank	GO Term	Adjusted P value
1	GO:0047890: flavanone 4-reductase activity	0.00E+00
2	GO:0016711: flavonoid 3'-monooxygenase activity	0.00E+00
3	GO:0045552: dihydrokaempferol 4-reductase activity	0.00E+00
4	GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity	0.00E+00
5	GO:0004566: beta-glucuronidase activity	4.12E-05
6	GO:0008460: dTDP-glucose 4,6-dehydratase activity	4.12E-05
7	GO:0010280: UDP-L-rhamnose synthase activity	4.12E-05
8	GO:0050377: UDP-glucose 4,6-dehydratase activity	4.12E-05
9	GO:0050736: O-malonyltransferase activity	4.12E-05
10	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.23E-04
11	GO:0045430: chalcone isomerase activity	1.53E-04
12	GO:0031386: protein tag	1.98E-04
13	GO:0035252: UDP-xylosyltransferase activity	2.47E-04
14	GO:0016621: cinnamoyl-CoA reductase activity	3.49E-04
15	GO:0016207: 4-coumarate-CoA ligase activity	5.18E-04
16	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	6.24E-04
17	GO:0046982: protein heterodimerization activity	1.11E-03
18	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.33E-03
19	GO:0016853: isomerase activity	1.82E-03
20	GO:0050662: coenzyme binding	1.82E-03
21	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.99E-03
22	GO:0016740: transferase activity	4.34E-03
23	GO:0003690: double-stranded DNA binding	5.34E-03
24	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	5.98E-03
25	GO:0080043: quercetin 3-O-glucosyltransferase activity	6.24E-03
26	GO:0080044: quercetin 7-O-glucosyltransferase activity	6.24E-03
27	GO:0016874: ligase activity	6.38E-03
28	GO:0015035: protein disulfide oxidoreductase activity	6.78E-03
29	GO:0043565: sequence-specific DNA binding	7.50E-03
30	GO:0016758: transferase activity, transferring hexosyl groups	7.62E-03
31	GO:0016788: hydrolase activity, acting on ester bonds	1.34E-02
32	GO:0052689: carboxylic ester hydrolase activity	1.65E-02
33	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.75E-02
34	GO:0042803: protein homodimerization activity	1.81E-02
35	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.89E-02
36	GO:0009055: electron carrier activity	2.14E-02
37	GO:0016757: transferase activity, transferring glycosyl groups	2.46E-02
38	GO:0016887: ATPase activity	2.78E-02
39	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.73E-02
40	GO:0019825: oxygen binding	3.94E-02
41	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.97E-02
42	GO:0005506: iron ion binding	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0042406: extrinsic component of endoplasmic reticulum membrane	7.34E-05
2	GO:0005765: lysosomal membrane	7.00E-04
3	GO:0000786: nucleosome	3.47E-03
4	GO:0000139: Golgi membrane	9.73E-03
5	GO:0043231: intracellular membrane-bounded organelle	2.18E-02
6	GO:0005802: trans-Golgi network	4.28E-02
7	GO:0005768: endosome	4.69E-02