co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G59700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015833: peptide transport	0.00E+00
2	GO:0006105: succinate metabolic process	0.00E+00
3	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
4	GO:0032497: detection of lipopolysaccharide	0.00E+00
5	GO:0071578: zinc II ion transmembrane import	0.00E+00
6	GO:0019484: beta-alanine catabolic process	0.00E+00
7	GO:0006725: cellular aromatic compound metabolic process	0.00E+00
8	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
9	GO:0009450: gamma-aminobutyric acid catabolic process	1.46E-04
10	GO:1990641: response to iron ion starvation	1.46E-04
11	GO:0046520: sphingoid biosynthetic process	1.46E-04
12	GO:0009865: pollen tube adhesion	1.46E-04
13	GO:0006540: glutamate decarboxylation to succinate	1.46E-04
14	GO:0035494: SNARE complex disassembly	1.46E-04
15	GO:0006535: cysteine biosynthetic process from serine	2.22E-04
16	GO:0008219: cell death	2.33E-04
17	GO:0010150: leaf senescence	3.00E-04
18	GO:0032509: endosome transport via multivesicular body sorting pathway	3.33E-04
19	GO:0010033: response to organic substance	3.33E-04
20	GO:0006212: uracil catabolic process	3.33E-04
21	GO:1900459: positive regulation of brassinosteroid mediated signaling pathway	3.33E-04
22	GO:0006101: citrate metabolic process	3.33E-04
23	GO:0019483: beta-alanine biosynthetic process	3.33E-04
24	GO:0015865: purine nucleotide transport	3.33E-04
25	GO:0052542: defense response by callose deposition	3.33E-04
26	GO:0042939: tripeptide transport	3.33E-04
27	GO:1902000: homogentisate catabolic process	3.33E-04
28	GO:0009308: amine metabolic process	3.33E-04
29	GO:0019344: cysteine biosynthetic process	5.33E-04
30	GO:0009072: aromatic amino acid family metabolic process	5.47E-04
31	GO:0006954: inflammatory response	5.47E-04
32	GO:0071215: cellular response to abscisic acid stimulus	7.64E-04
33	GO:0006020: inositol metabolic process	7.83E-04
34	GO:0046902: regulation of mitochondrial membrane permeability	7.83E-04
35	GO:0072334: UDP-galactose transmembrane transport	7.83E-04
36	GO:0015749: monosaccharide transport	7.83E-04
37	GO:0006809: nitric oxide biosynthetic process	7.83E-04
38	GO:0009399: nitrogen fixation	7.83E-04
39	GO:0009963: positive regulation of flavonoid biosynthetic process	7.83E-04
40	GO:0006882: cellular zinc ion homeostasis	7.83E-04
41	GO:0000578: embryonic axis specification	7.83E-04
42	GO:0006572: tyrosine catabolic process	7.83E-04
43	GO:0006624: vacuolar protein processing	7.83E-04
44	GO:0046323: glucose import	1.03E-03
45	GO:1902584: positive regulation of response to water deprivation	1.04E-03
46	GO:0006536: glutamate metabolic process	1.04E-03
47	GO:0061088: regulation of sequestering of zinc ion	1.04E-03
48	GO:0010508: positive regulation of autophagy	1.04E-03
49	GO:0042594: response to starvation	1.04E-03
50	GO:0006878: cellular copper ion homeostasis	1.04E-03
51	GO:0042938: dipeptide transport	1.04E-03
52	GO:0006542: glutamine biosynthetic process	1.04E-03
53	GO:0010222: stem vascular tissue pattern formation	1.04E-03
54	GO:0048544: recognition of pollen	1.11E-03
55	GO:0000290: deadenylation-dependent decapping of nuclear-transcribed mRNA	1.31E-03
56	GO:0042732: D-xylose metabolic process	1.61E-03
57	GO:0000741: karyogamy	1.61E-03
58	GO:0010337: regulation of salicylic acid metabolic process	1.61E-03
59	GO:0016070: RNA metabolic process	1.61E-03
60	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.61E-03
61	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.93E-03
62	GO:0031930: mitochondria-nucleus signaling pathway	1.93E-03
63	GO:0006694: steroid biosynthetic process	1.93E-03
64	GO:0006955: immune response	2.27E-03
65	GO:0009395: phospholipid catabolic process	2.27E-03
66	GO:0071669: plant-type cell wall organization or biogenesis	2.27E-03
67	GO:0070370: cellular heat acclimation	2.27E-03
68	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	2.27E-03
69	GO:0006333: chromatin assembly or disassembly	2.27E-03
70	GO:0010044: response to aluminum ion	2.27E-03
71	GO:0048767: root hair elongation	2.47E-03
72	GO:0055114: oxidation-reduction process	2.48E-03
73	GO:0016559: peroxisome fission	2.63E-03
74	GO:0009061: anaerobic respiration	2.63E-03
75	GO:0006102: isocitrate metabolic process	2.63E-03
76	GO:0010043: response to zinc ion	2.72E-03
77	GO:0030968: endoplasmic reticulum unfolded protein response	3.00E-03
78	GO:0043562: cellular response to nitrogen levels	3.00E-03
79	GO:0009808: lignin metabolic process	3.00E-03
80	GO:0006099: tricarboxylic acid cycle	3.11E-03
81	GO:0006098: pentose-phosphate shunt	3.40E-03
82	GO:0046916: cellular transition metal ion homeostasis	3.40E-03
83	GO:0008202: steroid metabolic process	3.81E-03
84	GO:0009640: photomorphogenesis	3.83E-03
85	GO:0009970: cellular response to sulfate starvation	4.23E-03
86	GO:0009641: shade avoidance	4.23E-03
87	GO:0009409: response to cold	4.51E-03
88	GO:0006378: mRNA polyadenylation	4.67E-03
89	GO:0071365: cellular response to auxin stimulus	5.13E-03
90	GO:0034605: cellular response to heat	6.09E-03
91	GO:0006541: glutamine metabolic process	6.09E-03
92	GO:0007034: vacuolar transport	6.09E-03
93	GO:0048367: shoot system development	6.28E-03
94	GO:0009626: plant-type hypersensitive response	6.48E-03
95	GO:0007031: peroxisome organization	6.59E-03
96	GO:0005985: sucrose metabolic process	6.59E-03
97	GO:0010053: root epidermal cell differentiation	6.59E-03
98	GO:0034976: response to endoplasmic reticulum stress	7.10E-03
99	GO:0009651: response to salt stress	7.19E-03
100	GO:0006396: RNA processing	7.54E-03
101	GO:0007010: cytoskeleton organization	7.63E-03
102	GO:0045333: cellular respiration	7.63E-03
103	GO:0009742: brassinosteroid mediated signaling pathway	7.76E-03
104	GO:0048364: root development	7.90E-03
105	GO:0031408: oxylipin biosynthetic process	8.73E-03
106	GO:0035428: hexose transmembrane transport	9.30E-03
107	GO:0071456: cellular response to hypoxia	9.30E-03
108	GO:0040007: growth	9.89E-03
109	GO:0042631: cellular response to water deprivation	1.17E-02
110	GO:0042391: regulation of membrane potential	1.17E-02
111	GO:0000271: polysaccharide biosynthetic process	1.17E-02
112	GO:0010154: fruit development	1.24E-02
113	GO:0010197: polar nucleus fusion	1.24E-02
114	GO:0061025: membrane fusion	1.30E-02
115	GO:0010183: pollen tube guidance	1.37E-02
116	GO:0006635: fatty acid beta-oxidation	1.43E-02
117	GO:0007166: cell surface receptor signaling pathway	1.45E-02
118	GO:0010252: auxin homeostasis	1.64E-02
119	GO:0006914: autophagy	1.64E-02
120	GO:0010286: heat acclimation	1.72E-02
121	GO:0071805: potassium ion transmembrane transport	1.72E-02
122	GO:0051607: defense response to virus	1.79E-02
123	GO:0016126: sterol biosynthetic process	1.86E-02
124	GO:0001666: response to hypoxia	1.86E-02
125	GO:0009826: unidimensional cell growth	1.89E-02
126	GO:0009816: defense response to bacterium, incompatible interaction	1.94E-02
127	GO:0042128: nitrate assimilation	2.01E-02
128	GO:0048573: photoperiodism, flowering	2.09E-02
129	GO:0030244: cellulose biosynthetic process	2.25E-02
130	GO:0009832: plant-type cell wall biogenesis	2.33E-02
131	GO:0006811: ion transport	2.41E-02
132	GO:0009631: cold acclimation	2.49E-02
133	GO:0006865: amino acid transport	2.58E-02
134	GO:0046777: protein autophosphorylation	2.61E-02
135	GO:0044550: secondary metabolite biosynthetic process	2.65E-02
136	GO:0045087: innate immune response	2.66E-02
137	GO:0045454: cell redox homeostasis	2.92E-02
138	GO:0006839: mitochondrial transport	2.92E-02
139	GO:0030001: metal ion transport	2.92E-02
140	GO:0051707: response to other organism	3.19E-02
141	GO:0006869: lipid transport	3.20E-02
142	GO:0009636: response to toxic substance	3.47E-02
143	GO:0016042: lipid catabolic process	3.50E-02
144	GO:0006468: protein phosphorylation	3.52E-02
145	GO:0009751: response to salicylic acid	3.55E-02
146	GO:0009414: response to water deprivation	3.64E-02
147	GO:0000165: MAPK cascade	3.65E-02
148	GO:0042538: hyperosmotic salinity response	3.75E-02
149	GO:0006812: cation transport	3.75E-02
150	GO:0006397: mRNA processing	3.75E-02
151	GO:0009809: lignin biosynthetic process	3.94E-02
152	GO:0006813: potassium ion transport	3.94E-02
153	GO:0051603: proteolysis involved in cellular protein catabolic process	4.04E-02
154	GO:0006857: oligopeptide transport	4.14E-02
155	GO:0009733: response to auxin	4.32E-02
156	GO:0009620: response to fungus	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0047205: quinate O-hydroxycinnamoyltransferase activity	0.00E+00
2	GO:0047172: shikimate O-hydroxycinnamoyltransferase activity	0.00E+00
3	GO:0009045: xylose isomerase activity	0.00E+00
4	GO:0017113: dihydropyrimidine dehydrogenase (NADP+) activity	0.00E+00
5	GO:0016701: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	0.00E+00
6	GO:0015197: peptide transporter activity	0.00E+00
7	GO:0004334: fumarylacetoacetase activity	0.00E+00
8	GO:0015334: high-affinity oligopeptide transporter activity	0.00E+00
9	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
10	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
11	GO:0004525: ribonuclease III activity	1.02E-04
12	GO:0009679: hexose:proton symporter activity	1.46E-04
13	GO:0000170: sphingosine hydroxylase activity	1.46E-04
14	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	1.46E-04
15	GO:0046870: cadmium ion binding	1.46E-04
16	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.46E-04
17	GO:0003867: 4-aminobutyrate transaminase activity	1.46E-04
18	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	1.46E-04
19	GO:0052595: aliphatic-amine oxidase activity	1.46E-04
20	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.46E-04
21	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	1.46E-04
22	GO:0050897: cobalt ion binding	2.84E-04
23	GO:0003994: aconitate hydratase activity	3.33E-04
24	GO:0042284: sphingolipid delta-4 desaturase activity	3.33E-04
25	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	3.33E-04
26	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	3.33E-04
27	GO:0042937: tripeptide transporter activity	3.33E-04
28	GO:0047209: coniferyl-alcohol glucosyltransferase activity	3.33E-04
29	GO:0004566: beta-glucuronidase activity	3.33E-04
30	GO:0032791: lead ion binding	3.33E-04
31	GO:0005483: soluble NSF attachment protein activity	5.47E-04
32	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	5.47E-04
33	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	5.47E-04
34	GO:0016595: glutamate binding	5.47E-04
35	GO:0009001: serine O-acetyltransferase activity	7.83E-04
36	GO:0048027: mRNA 5'-UTR binding	7.83E-04
37	GO:0004108: citrate (Si)-synthase activity	7.83E-04
38	GO:0030527: structural constituent of chromatin	7.83E-04
39	GO:0000339: RNA cap binding	7.83E-04
40	GO:0016301: kinase activity	8.90E-04
41	GO:0004737: pyruvate decarboxylase activity	1.04E-03
42	GO:0042936: dipeptide transporter activity	1.04E-03
43	GO:0019905: syntaxin binding	1.04E-03
44	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.04E-03
45	GO:0009916: alternative oxidase activity	1.04E-03
46	GO:0005459: UDP-galactose transmembrane transporter activity	1.31E-03
47	GO:0015145: monosaccharide transmembrane transporter activity	1.31E-03
48	GO:0008198: ferrous iron binding	1.31E-03
49	GO:0005471: ATP:ADP antiporter activity	1.31E-03
50	GO:0004356: glutamate-ammonia ligase activity	1.31E-03
51	GO:0015562: efflux transmembrane transporter activity	1.61E-03
52	GO:0030976: thiamine pyrophosphate binding	1.61E-03
53	GO:0004124: cysteine synthase activity	1.93E-03
54	GO:0051753: mannan synthase activity	1.93E-03
55	GO:0016831: carboxy-lyase activity	2.27E-03
56	GO:0004620: phospholipase activity	2.27E-03
57	GO:0008142: oxysterol binding	3.00E-03
58	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	3.40E-03
59	GO:0000989: transcription factor activity, transcription factor binding	3.40E-03
60	GO:0004713: protein tyrosine kinase activity	4.23E-03
61	GO:0047372: acylglycerol lipase activity	4.67E-03
62	GO:0004521: endoribonuclease activity	5.13E-03
63	GO:0008081: phosphoric diester hydrolase activity	5.60E-03
64	GO:0031625: ubiquitin protein ligase binding	5.70E-03
65	GO:0005507: copper ion binding	6.02E-03
66	GO:0004175: endopeptidase activity	6.09E-03
67	GO:0008131: primary amine oxidase activity	6.09E-03
68	GO:0030553: cGMP binding	6.59E-03
69	GO:0030552: cAMP binding	6.59E-03
70	GO:0005385: zinc ion transmembrane transporter activity	7.63E-03
71	GO:0043424: protein histidine kinase binding	8.18E-03
72	GO:0005216: ion channel activity	8.18E-03
73	GO:0015079: potassium ion transmembrane transporter activity	8.18E-03
74	GO:0008324: cation transmembrane transporter activity	8.18E-03
75	GO:0004707: MAP kinase activity	8.73E-03
76	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	9.42E-03
77	GO:0016760: cellulose synthase (UDP-forming) activity	9.89E-03
78	GO:0005506: iron ion binding	1.00E-02
79	GO:0030170: pyridoxal phosphate binding	1.02E-02
80	GO:0003756: protein disulfide isomerase activity	1.05E-02
81	GO:0015144: carbohydrate transmembrane transporter activity	1.10E-02
82	GO:0030551: cyclic nucleotide binding	1.17E-02
83	GO:0005249: voltage-gated potassium channel activity	1.17E-02
84	GO:0005351: sugar:proton symporter activity	1.24E-02
85	GO:0005355: glucose transmembrane transporter activity	1.30E-02
86	GO:0010181: FMN binding	1.30E-02
87	GO:0048038: quinone binding	1.43E-02
88	GO:0004197: cysteine-type endopeptidase activity	1.50E-02
89	GO:0004674: protein serine/threonine kinase activity	1.51E-02
90	GO:0016759: cellulose synthase activity	1.64E-02
91	GO:0005200: structural constituent of cytoskeleton	1.72E-02
92	GO:0051213: dioxygenase activity	1.86E-02
93	GO:0004806: triglyceride lipase activity	2.09E-02
94	GO:0030247: polysaccharide binding	2.09E-02
95	GO:0030246: carbohydrate binding	2.25E-02
96	GO:0004497: monooxygenase activity	2.44E-02
97	GO:0003993: acid phosphatase activity	2.75E-02
98	GO:0005524: ATP binding	2.89E-02
99	GO:0051539: 4 iron, 4 sulfur cluster binding	2.92E-02
100	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.16E-02
101	GO:0035091: phosphatidylinositol binding	3.37E-02
102	GO:0008270: zinc ion binding	3.51E-02
103	GO:0016298: lipase activity	4.04E-02
104	GO:0005215: transporter activity	4.24E-02
105	GO:0015171: amino acid transmembrane transporter activity	4.24E-02
106	GO:0045735: nutrient reservoir activity	4.44E-02
107	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.75E-02
108	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	2.70E-08
2	GO:0016021: integral component of membrane	2.30E-07
3	GO:0030173: integral component of Golgi membrane	5.87E-05
4	GO:0005773: vacuole	2.16E-04
5	GO:0005774: vacuolar membrane	2.19E-04
6	GO:0005794: Golgi apparatus	4.22E-04
7	GO:0042406: extrinsic component of endoplasmic reticulum membrane	5.47E-04
8	GO:0005849: mRNA cleavage factor complex	7.83E-04
9	GO:0000323: lytic vacuole	7.83E-04
10	GO:0009506: plasmodesma	1.11E-03
11	GO:0016020: membrane	1.51E-03
12	GO:0005779: integral component of peroxisomal membrane	3.00E-03
13	GO:0034045: pre-autophagosomal structure membrane	3.00E-03
14	GO:0005765: lysosomal membrane	4.67E-03
15	GO:0010008: endosome membrane	6.28E-03
16	GO:0030176: integral component of endoplasmic reticulum membrane	6.59E-03
17	GO:0005743: mitochondrial inner membrane	6.82E-03
18	GO:0005802: trans-Golgi network	7.20E-03
19	GO:0070469: respiratory chain	8.18E-03
20	GO:0005768: endosome	8.74E-03
21	GO:0005783: endoplasmic reticulum	1.11E-02
22	GO:0009705: plant-type vacuole membrane	1.27E-02
23	GO:0031965: nuclear membrane	1.37E-02
24	GO:0000785: chromatin	1.50E-02
25	GO:0005778: peroxisomal membrane	1.72E-02
26	GO:0005777: peroxisome	1.85E-02
27	GO:0000932: P-body	1.86E-02
28	GO:0000325: plant-type vacuole	2.49E-02
29	GO:0000786: nucleosome	2.58E-02
30	GO:0031201: SNARE complex	3.01E-02
31	GO:0005856: cytoskeleton	3.47E-02
32	GO:0005829: cytosol	3.71E-02
33	GO:0043231: intracellular membrane-bounded organelle	3.96E-02