GO Enrichment Analysis of Co-expressed Genes with
AT5G59540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045022: early endosome to late endosome transport | 0.00E+00 |
| 2 | GO:0070534: protein K63-linked ubiquitination | 4.57E-06 |
| 3 | GO:0006301: postreplication repair | 1.18E-05 |
| 4 | GO:0098721: uracil import across plasma membrane | 6.74E-05 |
| 5 | GO:0098702: adenine import across plasma membrane | 6.74E-05 |
| 6 | GO:0098710: guanine import across plasma membrane | 6.74E-05 |
| 7 | GO:0035344: hypoxanthine transport | 6.74E-05 |
| 8 | GO:1902000: homogentisate catabolic process | 1.62E-04 |
| 9 | GO:1900459: positive regulation of brassinosteroid mediated signaling pathway | 1.62E-04 |
| 10 | GO:0009072: aromatic amino acid family metabolic process | 2.75E-04 |
| 11 | GO:0006572: tyrosine catabolic process | 3.98E-04 |
| 12 | GO:0051259: protein oligomerization | 3.98E-04 |
| 13 | GO:0006979: response to oxidative stress | 4.23E-04 |
| 14 | GO:0010222: stem vascular tissue pattern formation | 5.32E-04 |
| 15 | GO:0006464: cellular protein modification process | 5.67E-04 |
| 16 | GO:0006950: response to stress | 7.86E-04 |
| 17 | GO:0006014: D-ribose metabolic process | 8.23E-04 |
| 18 | GO:0006555: methionine metabolic process | 8.23E-04 |
| 19 | GO:0046686: response to cadmium ion | 9.11E-04 |
| 20 | GO:0006694: steroid biosynthetic process | 9.79E-04 |
| 21 | GO:0048280: vesicle fusion with Golgi apparatus | 9.79E-04 |
| 22 | GO:0019509: L-methionine salvage from methylthioadenosine | 9.79E-04 |
| 23 | GO:0031930: mitochondria-nucleus signaling pathway | 9.79E-04 |
| 24 | GO:0016051: carbohydrate biosynthetic process | 1.08E-03 |
| 25 | GO:0006333: chromatin assembly or disassembly | 1.14E-03 |
| 26 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.14E-03 |
| 27 | GO:0098869: cellular oxidant detoxification | 1.14E-03 |
| 28 | GO:0009395: phospholipid catabolic process | 1.14E-03 |
| 29 | GO:0016559: peroxisome fission | 1.32E-03 |
| 30 | GO:0006491: N-glycan processing | 1.32E-03 |
| 31 | GO:0055114: oxidation-reduction process | 1.47E-03 |
| 32 | GO:0006972: hyperosmotic response | 1.50E-03 |
| 33 | GO:0006896: Golgi to vacuole transport | 2.10E-03 |
| 34 | GO:0016485: protein processing | 2.31E-03 |
| 35 | GO:0000266: mitochondrial fission | 2.53E-03 |
| 36 | GO:0010039: response to iron ion | 3.23E-03 |
| 37 | GO:0010053: root epidermal cell differentiation | 3.23E-03 |
| 38 | GO:0010167: response to nitrate | 3.23E-03 |
| 39 | GO:0009409: response to cold | 3.31E-03 |
| 40 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.73E-03 |
| 41 | GO:0045333: cellular respiration | 3.73E-03 |
| 42 | GO:0051302: regulation of cell division | 3.99E-03 |
| 43 | GO:0007005: mitochondrion organization | 4.53E-03 |
| 44 | GO:0006012: galactose metabolic process | 4.81E-03 |
| 45 | GO:0048443: stamen development | 5.09E-03 |
| 46 | GO:0042147: retrograde transport, endosome to Golgi | 5.38E-03 |
| 47 | GO:0009960: endosperm development | 5.98E-03 |
| 48 | GO:0009749: response to glucose | 6.60E-03 |
| 49 | GO:0019252: starch biosynthetic process | 6.60E-03 |
| 50 | GO:0006623: protein targeting to vacuole | 6.60E-03 |
| 51 | GO:0006891: intra-Golgi vesicle-mediated transport | 6.91E-03 |
| 52 | GO:0009630: gravitropism | 7.24E-03 |
| 53 | GO:0006914: autophagy | 7.90E-03 |
| 54 | GO:0010286: heat acclimation | 8.24E-03 |
| 55 | GO:0016126: sterol biosynthetic process | 8.93E-03 |
| 56 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.00E-02 |
| 57 | GO:0045454: cell redox homeostasis | 1.03E-02 |
| 58 | GO:0008219: cell death | 1.08E-02 |
| 59 | GO:0006499: N-terminal protein myristoylation | 1.15E-02 |
| 60 | GO:0006897: endocytosis | 1.44E-02 |
| 61 | GO:0010224: response to UV-B | 1.93E-02 |
| 62 | GO:0009620: response to fungus | 2.26E-02 |
| 63 | GO:0009742: brassinosteroid mediated signaling pathway | 2.52E-02 |
| 64 | GO:0055085: transmembrane transport | 2.86E-02 |
| 65 | GO:0009058: biosynthetic process | 2.94E-02 |
| 66 | GO:0006633: fatty acid biosynthetic process | 3.33E-02 |
| 67 | GO:0010150: leaf senescence | 3.57E-02 |
| 68 | GO:0007166: cell surface receptor signaling pathway | 3.92E-02 |
| 69 | GO:0009414: response to water deprivation | 4.44E-02 |
| 70 | GO:0009651: response to salt stress | 4.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004334: fumarylacetoacetase activity | 0.00E+00 |
| 2 | GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity | 0.00E+00 |
| 3 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 5.97E-05 |
| 4 | GO:0015207: adenine transmembrane transporter activity | 6.74E-05 |
| 5 | GO:0019707: protein-cysteine S-acyltransferase activity | 6.74E-05 |
| 6 | GO:0015208: guanine transmembrane transporter activity | 6.74E-05 |
| 7 | GO:0015294: solute:cation symporter activity | 6.74E-05 |
| 8 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 6.74E-05 |
| 9 | GO:0030544: Hsp70 protein binding | 6.74E-05 |
| 10 | GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity | 1.62E-04 |
| 11 | GO:0047216: inositol 3-alpha-galactosyltransferase activity | 1.62E-04 |
| 12 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 2.75E-04 |
| 13 | GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 2.75E-04 |
| 14 | GO:0030527: structural constituent of chromatin | 3.98E-04 |
| 15 | GO:0009916: alternative oxidase activity | 5.32E-04 |
| 16 | GO:0015210: uracil transmembrane transporter activity | 5.32E-04 |
| 17 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 8.23E-04 |
| 18 | GO:0004602: glutathione peroxidase activity | 9.79E-04 |
| 19 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 9.79E-04 |
| 20 | GO:0004747: ribokinase activity | 9.79E-04 |
| 21 | GO:0050897: cobalt ion binding | 9.93E-04 |
| 22 | GO:0008235: metalloexopeptidase activity | 1.14E-03 |
| 23 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 1.32E-03 |
| 24 | GO:0008865: fructokinase activity | 1.32E-03 |
| 25 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 1.69E-03 |
| 26 | GO:0045309: protein phosphorylated amino acid binding | 1.89E-03 |
| 27 | GO:0031625: ubiquitin protein ligase binding | 2.04E-03 |
| 28 | GO:0019904: protein domain specific binding | 2.31E-03 |
| 29 | GO:0004177: aminopeptidase activity | 2.31E-03 |
| 30 | GO:0008081: phosphoric diester hydrolase activity | 2.76E-03 |
| 31 | GO:0004842: ubiquitin-protein transferase activity | 3.41E-03 |
| 32 | GO:0043424: protein histidine kinase binding | 3.99E-03 |
| 33 | GO:0004872: receptor activity | 6.60E-03 |
| 34 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.57E-03 |
| 35 | GO:0061630: ubiquitin protein ligase activity | 9.02E-03 |
| 36 | GO:0005515: protein binding | 1.02E-02 |
| 37 | GO:0005096: GTPase activator activity | 1.11E-02 |
| 38 | GO:0003824: catalytic activity | 1.13E-02 |
| 39 | GO:0003746: translation elongation factor activity | 1.27E-02 |
| 40 | GO:0003993: acid phosphatase activity | 1.31E-02 |
| 41 | GO:0000149: SNARE binding | 1.35E-02 |
| 42 | GO:0005484: SNAP receptor activity | 1.52E-02 |
| 43 | GO:0035091: phosphatidylinositol binding | 1.61E-02 |
| 44 | GO:0008234: cysteine-type peptidase activity | 2.02E-02 |
| 45 | GO:0022857: transmembrane transporter activity | 2.31E-02 |
| 46 | GO:0016746: transferase activity, transferring acyl groups | 2.47E-02 |
| 47 | GO:0016758: transferase activity, transferring hexosyl groups | 2.78E-02 |
| 48 | GO:0015144: carbohydrate transmembrane transporter activity | 3.22E-02 |
| 49 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.39E-02 |
| 50 | GO:0005351: sugar:proton symporter activity | 3.51E-02 |
| 51 | GO:0005506: iron ion binding | 4.48E-02 |
| 52 | GO:0005524: ATP binding | 4.59E-02 |
| 53 | GO:0016788: hydrolase activity, acting on ester bonds | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010009: cytoplasmic side of endosome membrane | 0.00E+00 |
| 2 | GO:0031372: UBC13-MMS2 complex | 4.57E-06 |
| 3 | GO:0000323: lytic vacuole | 3.98E-04 |
| 4 | GO:0030140: trans-Golgi network transport vesicle | 8.23E-04 |
| 5 | GO:0012507: ER to Golgi transport vesicle membrane | 1.32E-03 |
| 6 | GO:0031901: early endosome membrane | 1.69E-03 |
| 7 | GO:0005769: early endosome | 3.48E-03 |
| 8 | GO:0005783: endoplasmic reticulum | 3.78E-03 |
| 9 | GO:0005789: endoplasmic reticulum membrane | 3.97E-03 |
| 10 | GO:0070469: respiratory chain | 3.99E-03 |
| 11 | GO:0005741: mitochondrial outer membrane | 4.26E-03 |
| 12 | GO:0005770: late endosome | 5.98E-03 |
| 13 | GO:0016021: integral component of membrane | 6.18E-03 |
| 14 | GO:0005737: cytoplasm | 7.22E-03 |
| 15 | GO:0000785: chromatin | 7.24E-03 |
| 16 | GO:0005773: vacuole | 7.74E-03 |
| 17 | GO:0005778: peroxisomal membrane | 8.24E-03 |
| 18 | GO:0005829: cytosol | 8.69E-03 |
| 19 | GO:0005886: plasma membrane | 1.09E-02 |
| 20 | GO:0000325: plant-type vacuole | 1.19E-02 |
| 21 | GO:0031902: late endosome membrane | 1.44E-02 |
| 22 | GO:0031201: SNARE complex | 1.44E-02 |
| 23 | GO:0005635: nuclear envelope | 1.97E-02 |
| 24 | GO:0005777: peroxisome | 2.59E-02 |
| 25 | GO:0005759: mitochondrial matrix | 3.33E-02 |
| 26 | GO:0005802: trans-Golgi network | 3.61E-02 |
| 27 | GO:0005768: endosome | 4.10E-02 |