GO Enrichment Analysis of Co-expressed Genes with
AT5G59350
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905499: trichome papilla formation | 0.00E+00 |
| 2 | GO:0090391: granum assembly | 8.32E-07 |
| 3 | GO:0009735: response to cytokinin | 5.11E-06 |
| 4 | GO:0042335: cuticle development | 9.23E-06 |
| 5 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 9.24E-06 |
| 6 | GO:0009772: photosynthetic electron transport in photosystem II | 1.98E-05 |
| 7 | GO:0010196: nonphotochemical quenching | 1.98E-05 |
| 8 | GO:0005991: trehalose metabolic process | 6.10E-05 |
| 9 | GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway | 6.10E-05 |
| 10 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 6.10E-05 |
| 11 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.59E-05 |
| 12 | GO:0010167: response to nitrate | 1.30E-04 |
| 13 | GO:0010025: wax biosynthetic process | 1.46E-04 |
| 14 | GO:0043255: regulation of carbohydrate biosynthetic process | 1.48E-04 |
| 15 | GO:0015714: phosphoenolpyruvate transport | 2.51E-04 |
| 16 | GO:1901332: negative regulation of lateral root development | 3.65E-04 |
| 17 | GO:0071484: cellular response to light intensity | 3.65E-04 |
| 18 | GO:0045727: positive regulation of translation | 4.88E-04 |
| 19 | GO:0015713: phosphoglycerate transport | 4.88E-04 |
| 20 | GO:0010027: thylakoid membrane organization | 5.92E-04 |
| 21 | GO:0010236: plastoquinone biosynthetic process | 6.19E-04 |
| 22 | GO:0006665: sphingolipid metabolic process | 6.19E-04 |
| 23 | GO:0015995: chlorophyll biosynthetic process | 6.93E-04 |
| 24 | GO:0009913: epidermal cell differentiation | 7.57E-04 |
| 25 | GO:0006655: phosphatidylglycerol biosynthetic process | 7.57E-04 |
| 26 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 7.57E-04 |
| 27 | GO:0010337: regulation of salicylic acid metabolic process | 7.57E-04 |
| 28 | GO:0010189: vitamin E biosynthetic process | 9.01E-04 |
| 29 | GO:1900057: positive regulation of leaf senescence | 1.05E-03 |
| 30 | GO:0009395: phospholipid catabolic process | 1.05E-03 |
| 31 | GO:0031540: regulation of anthocyanin biosynthetic process | 1.21E-03 |
| 32 | GO:0055075: potassium ion homeostasis | 1.21E-03 |
| 33 | GO:0008610: lipid biosynthetic process | 1.21E-03 |
| 34 | GO:0070413: trehalose metabolism in response to stress | 1.21E-03 |
| 35 | GO:0015979: photosynthesis | 1.22E-03 |
| 36 | GO:0032544: plastid translation | 1.38E-03 |
| 37 | GO:0010206: photosystem II repair | 1.55E-03 |
| 38 | GO:0034765: regulation of ion transmembrane transport | 1.55E-03 |
| 39 | GO:0009809: lignin biosynthetic process | 1.62E-03 |
| 40 | GO:0016042: lipid catabolic process | 1.63E-03 |
| 41 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.73E-03 |
| 42 | GO:0006032: chitin catabolic process | 1.92E-03 |
| 43 | GO:0000038: very long-chain fatty acid metabolic process | 2.12E-03 |
| 44 | GO:0009773: photosynthetic electron transport in photosystem I | 2.12E-03 |
| 45 | GO:0015706: nitrate transport | 2.32E-03 |
| 46 | GO:0010229: inflorescence development | 2.52E-03 |
| 47 | GO:0009718: anthocyanin-containing compound biosynthetic process | 2.52E-03 |
| 48 | GO:0010207: photosystem II assembly | 2.74E-03 |
| 49 | GO:0048768: root hair cell tip growth | 2.74E-03 |
| 50 | GO:0048467: gynoecium development | 2.74E-03 |
| 51 | GO:0010143: cutin biosynthetic process | 2.74E-03 |
| 52 | GO:0071732: cellular response to nitric oxide | 2.96E-03 |
| 53 | GO:0010053: root epidermal cell differentiation | 2.96E-03 |
| 54 | GO:0009825: multidimensional cell growth | 2.96E-03 |
| 55 | GO:0042023: DNA endoreduplication | 3.18E-03 |
| 56 | GO:0005992: trehalose biosynthetic process | 3.42E-03 |
| 57 | GO:0006633: fatty acid biosynthetic process | 3.58E-03 |
| 58 | GO:0019953: sexual reproduction | 3.65E-03 |
| 59 | GO:0007017: microtubule-based process | 3.65E-03 |
| 60 | GO:0016998: cell wall macromolecule catabolic process | 3.89E-03 |
| 61 | GO:0030245: cellulose catabolic process | 4.15E-03 |
| 62 | GO:0045893: positive regulation of transcription, DNA-templated | 4.15E-03 |
| 63 | GO:0071369: cellular response to ethylene stimulus | 4.40E-03 |
| 64 | GO:0010091: trichome branching | 4.65E-03 |
| 65 | GO:0042391: regulation of membrane potential | 5.19E-03 |
| 66 | GO:0010182: sugar mediated signaling pathway | 5.46E-03 |
| 67 | GO:0015986: ATP synthesis coupled proton transport | 5.74E-03 |
| 68 | GO:0002229: defense response to oomycetes | 6.32E-03 |
| 69 | GO:0071281: cellular response to iron ion | 6.91E-03 |
| 70 | GO:0010252: auxin homeostasis | 7.21E-03 |
| 71 | GO:0080167: response to karrikin | 7.51E-03 |
| 72 | GO:0071805: potassium ion transmembrane transport | 7.52E-03 |
| 73 | GO:0009627: systemic acquired resistance | 8.81E-03 |
| 74 | GO:0030244: cellulose biosynthetic process | 9.82E-03 |
| 75 | GO:0006869: lipid transport | 9.88E-03 |
| 76 | GO:0009832: plant-type cell wall biogenesis | 1.02E-02 |
| 77 | GO:0010311: lateral root formation | 1.02E-02 |
| 78 | GO:0006468: protein phosphorylation | 1.18E-02 |
| 79 | GO:0009409: response to cold | 1.25E-02 |
| 80 | GO:0008283: cell proliferation | 1.39E-02 |
| 81 | GO:0006855: drug transmembrane transport | 1.55E-02 |
| 82 | GO:0009734: auxin-activated signaling pathway | 1.57E-02 |
| 83 | GO:0006364: rRNA processing | 1.71E-02 |
| 84 | GO:0006857: oligopeptide transport | 1.80E-02 |
| 85 | GO:0006096: glycolytic process | 1.93E-02 |
| 86 | GO:0009416: response to light stimulus | 1.98E-02 |
| 87 | GO:0051301: cell division | 2.16E-02 |
| 88 | GO:0016310: phosphorylation | 2.65E-02 |
| 89 | GO:0042744: hydrogen peroxide catabolic process | 2.83E-02 |
| 90 | GO:0009790: embryo development | 2.88E-02 |
| 91 | GO:0007623: circadian rhythm | 3.25E-02 |
| 92 | GO:0010150: leaf senescence | 3.25E-02 |
| 93 | GO:0045490: pectin catabolic process | 3.25E-02 |
| 94 | GO:0009651: response to salt stress | 3.90E-02 |
| 95 | GO:0071555: cell wall organization | 4.00E-02 |
| 96 | GO:0042742: defense response to bacterium | 4.00E-02 |
| 97 | GO:0009658: chloroplast organization | 4.43E-02 |
| 98 | GO:0009733: response to auxin | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 2 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 3 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.00E-05 |
| 4 | GO:0052689: carboxylic ester hydrolase activity | 1.09E-05 |
| 5 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 6.10E-05 |
| 6 | GO:0015121: phosphoenolpyruvate:phosphate antiporter activity | 6.10E-05 |
| 7 | GO:0005528: FK506 binding | 1.63E-04 |
| 8 | GO:0016746: transferase activity, transferring acyl groups | 2.35E-04 |
| 9 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 3.65E-04 |
| 10 | GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | 3.65E-04 |
| 11 | GO:0016851: magnesium chelatase activity | 3.65E-04 |
| 12 | GO:0015120: phosphoglycerate transmembrane transporter activity | 4.88E-04 |
| 13 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 4.88E-04 |
| 14 | GO:0052793: pectin acetylesterase activity | 4.88E-04 |
| 15 | GO:0016791: phosphatase activity | 4.99E-04 |
| 16 | GO:0009922: fatty acid elongase activity | 6.19E-04 |
| 17 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 7.57E-04 |
| 18 | GO:0016788: hydrolase activity, acting on ester bonds | 8.19E-04 |
| 19 | GO:0005242: inward rectifier potassium channel activity | 9.01E-04 |
| 20 | GO:0052747: sinapyl alcohol dehydrogenase activity | 1.21E-03 |
| 21 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.41E-03 |
| 22 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 1.55E-03 |
| 23 | GO:0015112: nitrate transmembrane transporter activity | 1.73E-03 |
| 24 | GO:0004568: chitinase activity | 1.92E-03 |
| 25 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 2.32E-03 |
| 26 | GO:0004565: beta-galactosidase activity | 2.52E-03 |
| 27 | GO:0008266: poly(U) RNA binding | 2.74E-03 |
| 28 | GO:0004672: protein kinase activity | 3.06E-03 |
| 29 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 3.18E-03 |
| 30 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 3.18E-03 |
| 31 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 3.18E-03 |
| 32 | GO:0004176: ATP-dependent peptidase activity | 3.89E-03 |
| 33 | GO:0030570: pectate lyase activity | 4.40E-03 |
| 34 | GO:0008810: cellulase activity | 4.40E-03 |
| 35 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.99E-03 |
| 36 | GO:0042802: identical protein binding | 4.99E-03 |
| 37 | GO:0005249: voltage-gated potassium channel activity | 5.19E-03 |
| 38 | GO:0030551: cyclic nucleotide binding | 5.19E-03 |
| 39 | GO:0004674: protein serine/threonine kinase activity | 5.38E-03 |
| 40 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 5.46E-03 |
| 41 | GO:0050662: coenzyme binding | 5.74E-03 |
| 42 | GO:0005200: structural constituent of cytoskeleton | 7.52E-03 |
| 43 | GO:0030247: polysaccharide binding | 9.14E-03 |
| 44 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 9.47E-03 |
| 45 | GO:0003993: acid phosphatase activity | 1.20E-02 |
| 46 | GO:0015293: symporter activity | 1.51E-02 |
| 47 | GO:0003690: double-stranded DNA binding | 1.76E-02 |
| 48 | GO:0016298: lipase activity | 1.76E-02 |
| 49 | GO:0019843: rRNA binding | 2.58E-02 |
| 50 | GO:0030246: carbohydrate binding | 2.66E-02 |
| 51 | GO:0016829: lyase activity | 2.73E-02 |
| 52 | GO:0015297: antiporter activity | 3.14E-02 |
| 53 | GO:0008168: methyltransferase activity | 4.31E-02 |
| 54 | GO:0005215: transporter activity | 4.41E-02 |
| 55 | GO:0004601: peroxidase activity | 4.43E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0010240: plastid pyruvate dehydrogenase complex | 0.00E+00 |
| 3 | GO:0009534: chloroplast thylakoid | 7.33E-07 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 1.96E-05 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 4.94E-05 |
| 6 | GO:0009923: fatty acid elongase complex | 6.10E-05 |
| 7 | GO:0030095: chloroplast photosystem II | 1.14E-04 |
| 8 | GO:0009579: thylakoid | 1.16E-04 |
| 9 | GO:0048046: apoplast | 1.81E-04 |
| 10 | GO:0010007: magnesium chelatase complex | 2.51E-04 |
| 11 | GO:0015630: microtubule cytoskeleton | 3.65E-04 |
| 12 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 7.57E-04 |
| 13 | GO:0008180: COP9 signalosome | 1.55E-03 |
| 14 | GO:0009505: plant-type cell wall | 2.40E-03 |
| 15 | GO:0010287: plastoglobule | 2.71E-03 |
| 16 | GO:0005576: extracellular region | 3.21E-03 |
| 17 | GO:0005618: cell wall | 3.68E-03 |
| 18 | GO:0009941: chloroplast envelope | 4.96E-03 |
| 19 | GO:0009523: photosystem II | 6.03E-03 |
| 20 | GO:0005886: plasma membrane | 6.48E-03 |
| 21 | GO:0009507: chloroplast | 6.62E-03 |
| 22 | GO:0010319: stromule | 7.52E-03 |
| 23 | GO:0000151: ubiquitin ligase complex | 9.82E-03 |
| 24 | GO:0019005: SCF ubiquitin ligase complex | 9.82E-03 |
| 25 | GO:0009536: plastid | 1.10E-02 |
| 26 | GO:0005789: endoplasmic reticulum membrane | 1.46E-02 |
| 27 | GO:0000502: proteasome complex | 1.71E-02 |
| 28 | GO:0009706: chloroplast inner membrane | 2.20E-02 |
| 29 | GO:0009570: chloroplast stroma | 2.91E-02 |
| 30 | GO:0031225: anchored component of membrane | 3.09E-02 |
| 31 | GO:0046658: anchored component of plasma membrane | 3.97E-02 |
| 32 | GO:0016021: integral component of membrane | 4.36E-02 |