GO Enrichment Analysis of Co-expressed Genes with
AT5G59250
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:0009772: photosynthetic electron transport in photosystem II | 1.07E-05 |
| 3 | GO:0010027: thylakoid membrane organization | 1.24E-05 |
| 4 | GO:0009773: photosynthetic electron transport in photosystem I | 4.16E-05 |
| 5 | GO:0000481: maturation of 5S rRNA | 4.18E-05 |
| 6 | GO:0034337: RNA folding | 4.18E-05 |
| 7 | GO:0045717: negative regulation of fatty acid biosynthetic process | 1.04E-04 |
| 8 | GO:0001736: establishment of planar polarity | 1.04E-04 |
| 9 | GO:0090391: granum assembly | 1.78E-04 |
| 10 | GO:0006518: peptide metabolic process | 1.78E-04 |
| 11 | GO:0016050: vesicle organization | 1.78E-04 |
| 12 | GO:0009735: response to cytokinin | 2.35E-04 |
| 13 | GO:1901332: negative regulation of lateral root development | 2.63E-04 |
| 14 | GO:0071484: cellular response to light intensity | 2.63E-04 |
| 15 | GO:0080170: hydrogen peroxide transmembrane transport | 2.63E-04 |
| 16 | GO:0030104: water homeostasis | 3.53E-04 |
| 17 | GO:0010021: amylopectin biosynthetic process | 3.53E-04 |
| 18 | GO:0045727: positive regulation of translation | 3.53E-04 |
| 19 | GO:0015995: chlorophyll biosynthetic process | 4.32E-04 |
| 20 | GO:0010311: lateral root formation | 5.01E-04 |
| 21 | GO:0009913: epidermal cell differentiation | 5.51E-04 |
| 22 | GO:0042549: photosystem II stabilization | 5.51E-04 |
| 23 | GO:0015979: photosynthesis | 6.66E-04 |
| 24 | GO:0010196: nonphotochemical quenching | 7.69E-04 |
| 25 | GO:0032508: DNA duplex unwinding | 8.84E-04 |
| 26 | GO:0032544: plastid translation | 1.00E-03 |
| 27 | GO:0006364: rRNA processing | 1.01E-03 |
| 28 | GO:0008152: metabolic process | 1.03E-03 |
| 29 | GO:0010206: photosystem II repair | 1.13E-03 |
| 30 | GO:0010205: photoinhibition | 1.25E-03 |
| 31 | GO:0048829: root cap development | 1.39E-03 |
| 32 | GO:0048765: root hair cell differentiation | 1.53E-03 |
| 33 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.67E-03 |
| 34 | GO:0010628: positive regulation of gene expression | 1.82E-03 |
| 35 | GO:0010207: photosystem II assembly | 1.97E-03 |
| 36 | GO:0010143: cutin biosynthetic process | 1.97E-03 |
| 37 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.29E-03 |
| 38 | GO:0003333: amino acid transmembrane transport | 2.80E-03 |
| 39 | GO:0071369: cellular response to ethylene stimulus | 3.15E-03 |
| 40 | GO:0009306: protein secretion | 3.33E-03 |
| 41 | GO:0034220: ion transmembrane transport | 3.71E-03 |
| 42 | GO:0009958: positive gravitropism | 3.91E-03 |
| 43 | GO:0015986: ATP synthesis coupled proton transport | 4.11E-03 |
| 44 | GO:0048825: cotyledon development | 4.31E-03 |
| 45 | GO:0019252: starch biosynthetic process | 4.31E-03 |
| 46 | GO:0042742: defense response to bacterium | 4.54E-03 |
| 47 | GO:0016032: viral process | 4.72E-03 |
| 48 | GO:0006865: amino acid transport | 7.97E-03 |
| 49 | GO:0009734: auxin-activated signaling pathway | 9.56E-03 |
| 50 | GO:0009926: auxin polar transport | 9.82E-03 |
| 51 | GO:0016310: phosphorylation | 1.42E-02 |
| 52 | GO:0009624: response to nematode | 1.55E-02 |
| 53 | GO:0009742: brassinosteroid mediated signaling pathway | 1.62E-02 |
| 54 | GO:0009845: seed germination | 1.93E-02 |
| 55 | GO:0006633: fatty acid biosynthetic process | 2.14E-02 |
| 56 | GO:0040008: regulation of growth | 2.22E-02 |
| 57 | GO:0007166: cell surface receptor signaling pathway | 2.52E-02 |
| 58 | GO:0009733: response to auxin | 2.75E-02 |
| 59 | GO:0042254: ribosome biogenesis | 3.17E-02 |
| 60 | GO:0009409: response to cold | 3.32E-02 |
| 61 | GO:0009723: response to ethylene | 3.47E-02 |
| 62 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.74E-02 |
| 63 | GO:0045892: negative regulation of transcription, DNA-templated | 4.19E-02 |
| 64 | GO:0032259: methylation | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 3 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0050139: nicotinate-N-glucosyltransferase activity | 4.18E-05 |
| 5 | GO:0045485: omega-6 fatty acid desaturase activity | 4.18E-05 |
| 6 | GO:0005528: FK506 binding | 9.57E-05 |
| 7 | GO:0033201: alpha-1,4-glucan synthase activity | 1.04E-04 |
| 8 | GO:0004373: glycogen (starch) synthase activity | 1.78E-04 |
| 9 | GO:0016851: magnesium chelatase activity | 2.63E-04 |
| 10 | GO:0009011: starch synthase activity | 3.53E-04 |
| 11 | GO:0010011: auxin binding | 3.53E-04 |
| 12 | GO:0010328: auxin influx transmembrane transporter activity | 3.53E-04 |
| 13 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 5.51E-04 |
| 14 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 5.51E-04 |
| 15 | GO:0043022: ribosome binding | 8.84E-04 |
| 16 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.87E-04 |
| 17 | GO:0019843: rRNA binding | 1.77E-03 |
| 18 | GO:0008266: poly(U) RNA binding | 1.97E-03 |
| 19 | GO:0004176: ATP-dependent peptidase activity | 2.80E-03 |
| 20 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 3.91E-03 |
| 21 | GO:0050662: coenzyme binding | 4.11E-03 |
| 22 | GO:0003824: catalytic activity | 5.11E-03 |
| 23 | GO:0016791: phosphatase activity | 5.15E-03 |
| 24 | GO:0015250: water channel activity | 5.81E-03 |
| 25 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.98E-03 |
| 26 | GO:0004222: metalloendopeptidase activity | 7.47E-03 |
| 27 | GO:0003746: translation elongation factor activity | 8.23E-03 |
| 28 | GO:0015293: symporter activity | 1.07E-02 |
| 29 | GO:0015171: amino acid transmembrane transporter activity | 1.30E-02 |
| 30 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.46E-02 |
| 31 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.46E-02 |
| 32 | GO:0016746: transferase activity, transferring acyl groups | 1.59E-02 |
| 33 | GO:0016301: kinase activity | 1.88E-02 |
| 34 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.18E-02 |
| 35 | GO:0008017: microtubule binding | 2.37E-02 |
| 36 | GO:0008194: UDP-glycosyltransferase activity | 2.48E-02 |
| 37 | GO:0005215: transporter activity | 2.71E-02 |
| 38 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.72E-02 |
| 39 | GO:0008233: peptidase activity | 3.60E-02 |
| 40 | GO:0004672: protein kinase activity | 3.60E-02 |
| 41 | GO:0003729: mRNA binding | 3.64E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.43E-19 |
| 2 | GO:0009534: chloroplast thylakoid | 1.25E-13 |
| 3 | GO:0009941: chloroplast envelope | 2.74E-11 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.57E-10 |
| 5 | GO:0009570: chloroplast stroma | 4.86E-07 |
| 6 | GO:0009579: thylakoid | 2.56E-06 |
| 7 | GO:0010287: plastoglobule | 6.30E-06 |
| 8 | GO:0009515: granal stacked thylakoid | 4.18E-05 |
| 9 | GO:0043674: columella | 4.18E-05 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 1.56E-04 |
| 11 | GO:0010007: magnesium chelatase complex | 1.78E-04 |
| 12 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 5.51E-04 |
| 13 | GO:0042807: central vacuole | 7.69E-04 |
| 14 | GO:0009986: cell surface | 7.69E-04 |
| 15 | GO:0009501: amyloplast | 8.84E-04 |
| 16 | GO:0009538: photosystem I reaction center | 8.84E-04 |
| 17 | GO:0055028: cortical microtubule | 1.39E-03 |
| 18 | GO:0009706: chloroplast inner membrane | 1.42E-03 |
| 19 | GO:0032040: small-subunit processome | 1.67E-03 |
| 20 | GO:0009508: plastid chromosome | 1.82E-03 |
| 21 | GO:0030095: chloroplast photosystem II | 1.97E-03 |
| 22 | GO:0031969: chloroplast membrane | 4.61E-03 |
| 23 | GO:0010319: stromule | 5.36E-03 |
| 24 | GO:0009295: nucleoid | 5.36E-03 |
| 25 | GO:0016020: membrane | 8.35E-03 |
| 26 | GO:0031977: thylakoid lumen | 9.28E-03 |
| 27 | GO:0009705: plant-type vacuole membrane | 2.29E-02 |
| 28 | GO:0005840: ribosome | 2.57E-02 |
| 29 | GO:0005874: microtubule | 3.56E-02 |