Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G58960

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0008616: queuosine biosynthetic process7.70E-06
2GO:0010190: cytochrome b6f complex assembly5.52E-05
3GO:0010444: guard mother cell differentiation8.18E-05
4GO:0010492: maintenance of shoot apical meristem identity9.62E-05
5GO:0048507: meristem development1.27E-04
6GO:0008356: asymmetric cell division1.44E-04
7GO:0050826: response to freezing2.14E-04
8GO:0000302: response to reactive oxygen species5.27E-04
9GO:0034599: cellular response to oxidative stress9.50E-04
10GO:0042744: hydrogen peroxide catabolic process2.10E-03
11GO:0015979: photosynthesis4.06E-03
12GO:0045454: cell redox homeostasis4.20E-03
13GO:0048364: root development4.98E-03
14GO:0009793: embryo development ending in seed dormancy2.14E-02
15GO:0006508: proteolysis2.62E-02
16GO:0006351: transcription, DNA-templated4.97E-02
RankGO TermAdjusted P value
1GO:0008479: queuine tRNA-ribosyltransferase activity7.70E-06
2GO:0004130: cytochrome-c peroxidase activity5.52E-05
3GO:0016597: amino acid binding6.45E-04
4GO:0016874: ligase activity1.59E-03
5GO:0004601: peroxidase activity3.21E-03
6GO:0046983: protein dimerization activity1.45E-02
7GO:0020037: heme binding1.63E-02
8GO:0016787: hydrolase activity2.03E-02
9GO:0008270: zinc ion binding2.25E-02
10GO:0003676: nucleic acid binding3.24E-02
11GO:0003700: transcription factor activity, sequence-specific DNA binding4.84E-02
RankGO TermAdjusted P value
1GO:0009543: chloroplast thylakoid lumen6.09E-05
2GO:0009535: chloroplast thylakoid membrane1.68E-04
3GO:0030095: chloroplast photosystem II2.33E-04
4GO:0009523: photosystem II5.05E-04
5GO:0031977: thylakoid lumen1.03E-03
6GO:0009507: chloroplast7.24E-03
7GO:0009579: thylakoid8.15E-03
8GO:0009534: chloroplast thylakoid8.21E-03
9GO:0009570: chloroplast stroma4.52E-02
Gene type



Gene DE type