Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G58770

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015843: methylammonium transport0.00E+00
2GO:0015809: arginine transport0.00E+00
3GO:0015822: ornithine transport0.00E+00
4GO:0042178: xenobiotic catabolic process0.00E+00
5GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene0.00E+00
6GO:0010336: gibberellic acid homeostasis0.00E+00
7GO:0071492: cellular response to UV-A1.08E-06
8GO:0071486: cellular response to high light intensity4.96E-06
9GO:0009765: photosynthesis, light harvesting4.96E-06
10GO:0006559: L-phenylalanine catabolic process1.28E-05
11GO:0000066: mitochondrial ornithine transport7.07E-05
12GO:0006805: xenobiotic metabolic process7.07E-05
13GO:0071490: cellular response to far red light7.07E-05
14GO:0016119: carotene metabolic process7.07E-05
15GO:1901349: glucosinolate transport7.07E-05
16GO:0090449: phloem glucosinolate loading7.07E-05
17GO:0006659: phosphatidylserine biosynthetic process7.07E-05
18GO:0019605: butyrate metabolic process7.07E-05
19GO:0006083: acetate metabolic process7.07E-05
20GO:0051555: flavonol biosynthetic process7.72E-05
21GO:0009698: phenylpropanoid metabolic process9.12E-05
22GO:0000272: polysaccharide catabolic process9.12E-05
23GO:0009225: nucleotide-sugar metabolic process1.59E-04
24GO:0019853: L-ascorbic acid biosynthetic process1.59E-04
25GO:0015802: basic amino acid transport1.70E-04
26GO:0071491: cellular response to red light1.70E-04
27GO:1900386: positive regulation of flavonol biosynthetic process1.70E-04
28GO:0080167: response to karrikin1.74E-04
29GO:0010253: UDP-rhamnose biosynthetic process2.86E-04
30GO:0044375: regulation of peroxisome size2.86E-04
31GO:0040009: regulation of growth rate2.86E-04
32GO:0006651: diacylglycerol biosynthetic process2.86E-04
33GO:0016117: carotenoid biosynthetic process3.49E-04
34GO:0006520: cellular amino acid metabolic process4.06E-04
35GO:0009963: positive regulation of flavonoid biosynthetic process4.15E-04
36GO:0042823: pyridoxal phosphate biosynthetic process4.15E-04
37GO:0009650: UV protection4.15E-04
38GO:0015696: ammonium transport4.15E-04
39GO:0006572: tyrosine catabolic process4.15E-04
40GO:0048442: sepal development5.53E-04
41GO:0072488: ammonium transmembrane transport5.53E-04
42GO:0006021: inositol biosynthetic process5.53E-04
43GO:0071483: cellular response to blue light5.53E-04
44GO:0016123: xanthophyll biosynthetic process7.00E-04
45GO:0009435: NAD biosynthetic process7.00E-04
46GO:0071493: cellular response to UV-B7.00E-04
47GO:0016120: carotene biosynthetic process7.00E-04
48GO:0010117: photoprotection7.00E-04
49GO:0010236: plastoquinone biosynthetic process7.00E-04
50GO:0006097: glyoxylate cycle7.00E-04
51GO:0010264: myo-inositol hexakisphosphate biosynthetic process8.57E-04
52GO:0010315: auxin efflux8.57E-04
53GO:0050665: hydrogen peroxide biosynthetic process8.57E-04
54GO:0010304: PSII associated light-harvesting complex II catabolic process8.57E-04
55GO:0009813: flavonoid biosynthetic process9.62E-04
56GO:0010076: maintenance of floral meristem identity1.02E-03
57GO:0009854: oxidative photosynthetic carbon pathway1.02E-03
58GO:0016559: peroxisome fission1.37E-03
59GO:0030091: protein repair1.37E-03
60GO:0009926: auxin polar transport1.47E-03
61GO:0015979: photosynthesis1.56E-03
62GO:0009809: lignin biosynthetic process1.96E-03
63GO:0010380: regulation of chlorophyll biosynthetic process1.97E-03
64GO:0010224: response to UV-B2.03E-03
65GO:0006857: oligopeptide transport2.10E-03
66GO:0048441: petal development2.19E-03
67GO:0052544: defense response by callose deposition in cell wall2.41E-03
68GO:0008152: metabolic process2.44E-03
69GO:0030154: cell differentiation2.62E-03
70GO:0006006: glucose metabolic process2.88E-03
71GO:0009934: regulation of meristem structural organization3.12E-03
72GO:0034605: cellular response to heat3.12E-03
73GO:0048440: carpel development3.12E-03
74GO:0010223: secondary shoot formation3.12E-03
75GO:0007031: peroxisome organization3.37E-03
76GO:0010030: positive regulation of seed germination3.37E-03
77GO:0008299: isoprenoid biosynthetic process4.17E-03
78GO:0009768: photosynthesis, light harvesting in photosystem I4.17E-03
79GO:0003333: amino acid transmembrane transport4.44E-03
80GO:0009411: response to UV5.02E-03
81GO:0010584: pollen exine formation5.32E-03
82GO:0048443: stamen development5.32E-03
83GO:0042127: regulation of cell proliferation5.32E-03
84GO:0042631: cellular response to water deprivation5.93E-03
85GO:0009791: post-embryonic development6.89E-03
86GO:0008654: phospholipid biosynthetic process6.89E-03
87GO:0010252: auxin homeostasis8.25E-03
88GO:0006464: cellular protein modification process8.25E-03
89GO:0009911: positive regulation of flower development9.34E-03
90GO:0042128: nitrate assimilation1.01E-02
91GO:0048573: photoperiodism, flowering1.05E-02
92GO:0071555: cell wall organization1.09E-02
93GO:0018298: protein-chromophore linkage1.13E-02
94GO:0010311: lateral root formation1.17E-02
95GO:0010218: response to far red light1.21E-02
96GO:0055114: oxidation-reduction process1.22E-02
97GO:0010119: regulation of stomatal movement1.25E-02
98GO:0016042: lipid catabolic process1.31E-02
99GO:0009637: response to blue light1.33E-02
100GO:0006629: lipid metabolic process1.35E-02
101GO:0009408: response to heat1.35E-02
102GO:0006839: mitochondrial transport1.46E-02
103GO:0010114: response to red light1.59E-02
104GO:0042546: cell wall biogenesis1.64E-02
105GO:0009636: response to toxic substance1.73E-02
106GO:0006810: transport1.78E-02
107GO:0031347: regulation of defense response1.82E-02
108GO:0000165: MAPK cascade1.82E-02
109GO:0051603: proteolysis involved in cellular protein catabolic process2.01E-02
110GO:0009909: regulation of flower development2.11E-02
111GO:0009416: response to light stimulus2.40E-02
112GO:0009611: response to wounding2.46E-02
113GO:0042545: cell wall modification2.47E-02
114GO:0009624: response to nematode2.53E-02
115GO:0055085: transmembrane transport3.05E-02
116GO:0009058: biosynthetic process3.08E-02
117GO:0006633: fatty acid biosynthetic process3.49E-02
118GO:0045490: pectin catabolic process3.73E-02
119GO:0045944: positive regulation of transcription from RNA polymerase II promoter4.81E-02
120GO:0042742: defense response to bacterium4.84E-02
RankGO TermAdjusted P value
1GO:0016719: carotene 7,8-desaturase activity0.00E+00
2GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity0.00E+00
3GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity0.00E+00
4GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
5GO:0008734: L-aspartate oxidase activity0.00E+00
6GO:0047918: GDP-mannose 3,5-epimerase activity0.00E+00
7GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity0.00E+00
8GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity0.00E+00
9GO:0033961: cis-stilbene-oxide hydrolase activity0.00E+00
10GO:0050505: hydroquinone glucosyltransferase activity0.00E+00
11GO:0047213: anthocyanidin 3-O-glucosyltransferase activity0.00E+00
12GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity0.00E+00
13GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity0.00E+00
14GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity0.00E+00
15GO:1990055: phenylacetaldehyde synthase activity0.00E+00
16GO:0016161: beta-amylase activity1.83E-05
17GO:0016168: chlorophyll binding4.11E-05
18GO:0080048: GDP-D-glucose phosphorylase activity7.07E-05
19GO:0003987: acetate-CoA ligase activity7.07E-05
20GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity7.07E-05
21GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity7.07E-05
22GO:0080047: GDP-L-galactose phosphorylase activity7.07E-05
23GO:0047760: butyrate-CoA ligase activity7.07E-05
24GO:0090448: glucosinolate:proton symporter activity7.07E-05
25GO:0004837: tyrosine decarboxylase activity7.07E-05
26GO:0045486: naringenin 3-dioxygenase activity7.07E-05
27GO:0003824: catalytic activity9.31E-05
28GO:0008460: dTDP-glucose 4,6-dehydratase activity1.70E-04
29GO:0010280: UDP-L-rhamnose synthase activity1.70E-04
30GO:0050347: trans-octaprenyltranstransferase activity1.70E-04
31GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity1.70E-04
32GO:0000064: L-ornithine transmembrane transporter activity1.70E-04
33GO:0050377: UDP-glucose 4,6-dehydratase activity1.70E-04
34GO:0004512: inositol-3-phosphate synthase activity1.70E-04
35GO:0010291: carotene beta-ring hydroxylase activity1.70E-04
36GO:0035251: UDP-glucosyltransferase activity2.46E-04
37GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity2.86E-04
38GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity4.15E-04
39GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity4.15E-04
40GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity4.15E-04
41GO:0080032: methyl jasmonate esterase activity5.53E-04
42GO:0046527: glucosyltransferase activity5.53E-04
43GO:0008891: glycolate oxidase activity5.53E-04
44GO:0004301: epoxide hydrolase activity5.53E-04
45GO:0008194: UDP-glycosyltransferase activity6.80E-04
46GO:0016491: oxidoreductase activity7.61E-04
47GO:0080046: quercetin 4'-O-glucosyltransferase activity8.57E-04
48GO:0080030: methyl indole-3-acetate esterase activity8.57E-04
49GO:0008429: phosphatidylethanolamine binding8.57E-04
50GO:0102229: amylopectin maltohydrolase activity8.57E-04
51GO:0016208: AMP binding8.57E-04
52GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity8.57E-04
53GO:0008519: ammonium transmembrane transporter activity8.57E-04
54GO:0008195: phosphatidate phosphatase activity1.02E-03
55GO:0016757: transferase activity, transferring glycosyl groups1.04E-03
56GO:0102425: myricetin 3-O-glucosyltransferase activity1.19E-03
57GO:0102360: daphnetin 3-O-glucosyltransferase activity1.19E-03
58GO:0016621: cinnamoyl-CoA reductase activity1.19E-03
59GO:0005085: guanyl-nucleotide exchange factor activity1.19E-03
60GO:0047893: flavonol 3-O-glucosyltransferase activity1.37E-03
61GO:0008970: phosphatidylcholine 1-acylhydrolase activity1.56E-03
62GO:0016207: 4-coumarate-CoA ligase activity1.76E-03
63GO:0015174: basic amino acid transmembrane transporter activity1.97E-03
64GO:0009672: auxin:proton symporter activity1.97E-03
65GO:0047372: acylglycerol lipase activity2.41E-03
66GO:0080043: quercetin 3-O-glucosyltransferase activity2.54E-03
67GO:0080044: quercetin 7-O-glucosyltransferase activity2.54E-03
68GO:0010329: auxin efflux transmembrane transporter activity2.88E-03
69GO:0016758: transferase activity, transferring hexosyl groups3.37E-03
70GO:0031409: pigment binding3.63E-03
71GO:0102336: 3-oxo-arachidoyl-CoA synthase activity3.63E-03
72GO:0102337: 3-oxo-cerotoyl-CoA synthase activity3.63E-03
73GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity3.63E-03
74GO:0030170: pyridoxal phosphate binding3.84E-03
75GO:0031418: L-ascorbic acid binding3.89E-03
76GO:0004176: ATP-dependent peptidase activity4.44E-03
77GO:0022891: substrate-specific transmembrane transporter activity5.02E-03
78GO:0016853: isomerase activity6.56E-03
79GO:0010181: FMN binding6.56E-03
80GO:0016788: hydrolase activity, acting on ester bonds7.50E-03
81GO:0016759: cellulose synthase activity8.25E-03
82GO:0008237: metallopeptidase activity8.61E-03
83GO:0004806: triglyceride lipase activity1.05E-02
84GO:0004222: metalloendopeptidase activity1.21E-02
85GO:0005215: transporter activity1.24E-02
86GO:0003993: acid phosphatase activity1.37E-02
87GO:0004185: serine-type carboxypeptidase activity1.59E-02
88GO:0015293: symporter activity1.73E-02
89GO:0051287: NAD binding1.82E-02
90GO:0015171: amino acid transmembrane transporter activity2.11E-02
91GO:0045330: aspartyl esterase activity2.11E-02
92GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.26E-02
93GO:0016874: ligase activity2.42E-02
94GO:0030599: pectinesterase activity2.42E-02
95GO:0016746: transferase activity, transferring acyl groups2.58E-02
96GO:0016787: hydrolase activity2.85E-02
97GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding3.25E-02
98GO:0046910: pectinesterase inhibitor activity3.55E-02
99GO:0015297: antiporter activity3.61E-02
100GO:0008017: microtubule binding3.85E-02
101GO:0042802: identical protein binding4.42E-02
RankGO TermAdjusted P value
1GO:0031313: extrinsic component of endosome membrane0.00E+00
2GO:0097708: intracellular vesicle0.00E+00
3GO:0009523: photosystem II1.85E-05
4GO:0031234: extrinsic component of cytoplasmic side of plasma membrane7.07E-05
5GO:0009507: chloroplast1.75E-04
6GO:0009509: chromoplast2.86E-04
7GO:0009522: photosystem I4.36E-04
8GO:0005779: integral component of peroxisomal membrane1.56E-03
9GO:0030076: light-harvesting complex3.37E-03
10GO:0005777: peroxisome5.31E-03
11GO:0009535: chloroplast thylakoid membrane7.80E-03
12GO:0071944: cell periphery7.90E-03
13GO:0016020: membrane7.97E-03
14GO:0016021: integral component of membrane8.29E-03
15GO:0005778: peroxisomal membrane8.61E-03
16GO:0005743: mitochondrial inner membrane1.26E-02
17GO:0009536: plastid1.41E-02
18GO:0043231: intracellular membrane-bounded organelle1.49E-02
19GO:0000139: Golgi membrane1.60E-02
20GO:0005737: cytoplasm1.80E-02
21GO:0010287: plastoglobule2.85E-02
22GO:0009543: chloroplast thylakoid lumen2.96E-02
23GO:0005783: endoplasmic reticulum4.23E-02
Gene type



Gene DE type