Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G58620

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043201: response to leucine0.00E+00
2GO:0010421: hydrogen peroxide-mediated programmed cell death0.00E+00
3GO:0080052: response to histidine0.00E+00
4GO:0046865: terpenoid transport0.00E+00
5GO:0042430: indole-containing compound metabolic process0.00E+00
6GO:0080053: response to phenylalanine0.00E+00
7GO:0006793: phosphorus metabolic process0.00E+00
8GO:0051238: sequestering of metal ion0.00E+00
9GO:0072722: response to amitrole0.00E+00
10GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
11GO:0071456: cellular response to hypoxia2.16E-08
12GO:0042742: defense response to bacterium8.12E-07
13GO:0010204: defense response signaling pathway, resistance gene-independent2.94E-06
14GO:0006855: drug transmembrane transport4.16E-06
15GO:0006032: chitin catabolic process7.54E-06
16GO:0010200: response to chitin2.66E-05
17GO:0006874: cellular calcium ion homeostasis3.89E-05
18GO:0032491: detection of molecule of fungal origin1.73E-04
19GO:0015760: glucose-6-phosphate transport1.73E-04
20GO:0099132: ATP hydrolysis coupled cation transmembrane transport1.73E-04
21GO:0000272: polysaccharide catabolic process3.31E-04
22GO:0002240: response to molecule of oomycetes origin3.92E-04
23GO:0044419: interspecies interaction between organisms3.92E-04
24GO:0015712: hexose phosphate transport3.92E-04
25GO:0043066: negative regulation of apoptotic process3.92E-04
26GO:0042939: tripeptide transport3.92E-04
27GO:0051592: response to calcium ion3.92E-04
28GO:0009805: coumarin biosynthetic process3.92E-04
29GO:0048569: post-embryonic animal organ development3.92E-04
30GO:0090057: root radial pattern formation3.92E-04
31GO:0009751: response to salicylic acid4.19E-04
32GO:0010150: leaf senescence4.40E-04
33GO:0006468: protein phosphorylation4.74E-04
34GO:0002237: response to molecule of bacterial origin4.87E-04
35GO:0070588: calcium ion transmembrane transport5.46E-04
36GO:0015714: phosphoenolpyruvate transport6.40E-04
37GO:0080168: abscisic acid transport6.40E-04
38GO:0071367: cellular response to brassinosteroid stimulus6.40E-04
39GO:1900140: regulation of seedling development6.40E-04
40GO:0035436: triose phosphate transmembrane transport6.40E-04
41GO:0010351: lithium ion transport6.40E-04
42GO:0010272: response to silver ion6.40E-04
43GO:0015692: lead ion transport6.40E-04
44GO:0009636: response to toxic substance7.01E-04
45GO:0016998: cell wall macromolecule catabolic process8.10E-04
46GO:0010104: regulation of ethylene-activated signaling pathway9.13E-04
47GO:0006882: cellular zinc ion homeostasis9.13E-04
48GO:0046836: glycolipid transport9.13E-04
49GO:0045017: glycerolipid biosynthetic process9.13E-04
50GO:0048194: Golgi vesicle budding9.13E-04
51GO:0009626: plant-type hypersensitive response1.17E-03
52GO:0006621: protein retention in ER lumen1.21E-03
53GO:0015713: phosphoglycerate transport1.21E-03
54GO:0042938: dipeptide transport1.21E-03
55GO:0010109: regulation of photosynthesis1.21E-03
56GO:0060548: negative regulation of cell death1.21E-03
57GO:0045727: positive regulation of translation1.21E-03
58GO:0009624: response to nematode1.36E-03
59GO:0034052: positive regulation of plant-type hypersensitive response1.54E-03
60GO:0045487: gibberellin catabolic process1.54E-03
61GO:0009697: salicylic acid biosynthetic process1.54E-03
62GO:0010225: response to UV-C1.54E-03
63GO:0010193: response to ozone1.60E-03
64GO:0060918: auxin transport1.89E-03
65GO:0002238: response to molecule of fungal origin1.89E-03
66GO:0009643: photosynthetic acclimation1.89E-03
67GO:0050665: hydrogen peroxide biosynthetic process1.89E-03
68GO:0015691: cadmium ion transport1.89E-03
69GO:0009854: oxidative photosynthetic carbon pathway2.27E-03
70GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.27E-03
71GO:0009615: response to virus2.30E-03
72GO:0009627: systemic acquired resistance2.56E-03
73GO:0040008: regulation of growth2.56E-03
74GO:0030026: cellular manganese ion homeostasis2.67E-03
75GO:1900057: positive regulation of leaf senescence2.67E-03
76GO:2000070: regulation of response to water deprivation3.09E-03
77GO:0009407: toxin catabolic process3.29E-03
78GO:0009617: response to bacterium3.40E-03
79GO:0001558: regulation of cell growth3.54E-03
80GO:0010262: somatic embryogenesis3.54E-03
81GO:0009699: phenylpropanoid biosynthetic process3.54E-03
82GO:0022900: electron transport chain3.54E-03
83GO:0010112: regulation of systemic acquired resistance4.00E-03
84GO:0006979: response to oxidative stress4.12E-03
85GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway4.49E-03
86GO:0042542: response to hydrogen peroxide4.67E-03
87GO:0051707: response to other organism4.86E-03
88GO:0055062: phosphate ion homeostasis4.99E-03
89GO:0009870: defense response signaling pathway, resistance gene-dependent4.99E-03
90GO:0009688: abscisic acid biosynthetic process4.99E-03
91GO:0010162: seed dormancy process4.99E-03
92GO:0009611: response to wounding5.26E-03
93GO:0009089: lysine biosynthetic process via diaminopimelate5.52E-03
94GO:0055114: oxidation-reduction process5.55E-03
95GO:0002213: defense response to insect6.06E-03
96GO:0015706: nitrate transport6.06E-03
97GO:0006890: retrograde vesicle-mediated transport, Golgi to ER6.06E-03
98GO:0012501: programmed cell death6.06E-03
99GO:0006820: anion transport6.06E-03
100GO:0006812: cation transport6.10E-03
101GO:0010167: response to nitrate7.79E-03
102GO:0042343: indole glucosinolate metabolic process7.79E-03
103GO:0000027: ribosomal large subunit assembly9.03E-03
104GO:0051302: regulation of cell division9.69E-03
105GO:0098542: defense response to other organism1.03E-02
106GO:0031348: negative regulation of defense response1.10E-02
107GO:0019748: secondary metabolic process1.10E-02
108GO:0009753: response to jasmonic acid1.11E-02
109GO:0006952: defense response1.15E-02
110GO:0071215: cellular response to abscisic acid stimulus1.17E-02
111GO:0009686: gibberellin biosynthetic process1.17E-02
112GO:0071369: cellular response to ethylene stimulus1.17E-02
113GO:0006012: galactose metabolic process1.17E-02
114GO:0006817: phosphate ion transport1.24E-02
115GO:0042744: hydrogen peroxide catabolic process1.33E-02
116GO:0009958: positive gravitropism1.47E-02
117GO:0006885: regulation of pH1.47E-02
118GO:0006814: sodium ion transport1.54E-02
119GO:0006623: protein targeting to vacuole1.62E-02
120GO:0010183: pollen tube guidance1.62E-02
121GO:0009749: response to glucose1.62E-02
122GO:0002229: defense response to oomycetes1.70E-02
123GO:0032502: developmental process1.78E-02
124GO:0009639: response to red or far red light1.95E-02
125GO:0051607: defense response to virus2.12E-02
126GO:0042128: nitrate assimilation2.39E-02
127GO:0045893: positive regulation of transcription, DNA-templated2.51E-02
128GO:0016049: cell growth2.58E-02
129GO:0008219: cell death2.67E-02
130GO:0006811: ion transport2.87E-02
131GO:0009723: response to ethylene2.90E-02
132GO:0010043: response to zinc ion2.96E-02
133GO:0007568: aging2.96E-02
134GO:0080167: response to karrikin3.11E-02
135GO:0045087: innate immune response3.16E-02
136GO:0044550: secondary metabolite biosynthetic process3.38E-02
137GO:0006839: mitochondrial transport3.47E-02
138GO:0010114: response to red light3.79E-02
139GO:0009744: response to sucrose3.79E-02
140GO:0031347: regulation of defense response4.34E-02
141GO:0007165: signal transduction4.36E-02
142GO:0009664: plant-type cell wall organization4.45E-02
143GO:0042538: hyperosmotic salinity response4.45E-02
144GO:0009737: response to abscisic acid4.50E-02
145GO:0006813: potassium ion transport4.68E-02
146GO:0010224: response to UV-B4.80E-02
147GO:0006857: oligopeptide transport4.91E-02
RankGO TermAdjusted P value
1GO:0008843: endochitinase activity0.00E+00
2GO:0005046: KDEL sequence binding0.00E+00
3GO:0035885: exochitinase activity0.00E+00
4GO:1990837: sequence-specific double-stranded DNA binding0.00E+00
5GO:0015238: drug transmembrane transporter activity2.33E-05
6GO:0008061: chitin binding2.33E-05
7GO:0015297: antiporter activity4.71E-05
8GO:0010285: L,L-diaminopimelate aminotransferase activity1.73E-04
9GO:0004568: chitinase activity2.85E-04
10GO:0042937: tripeptide transporter activity3.92E-04
11GO:0045543: gibberellin 2-beta-dioxygenase activity3.92E-04
12GO:0015152: glucose-6-phosphate transmembrane transporter activity3.92E-04
13GO:0005388: calcium-transporting ATPase activity4.32E-04
14GO:0005217: intracellular ligand-gated ion channel activity5.46E-04
15GO:0004970: ionotropic glutamate receptor activity5.46E-04
16GO:0071917: triose-phosphate transmembrane transporter activity6.40E-04
17GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity9.13E-04
18GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity9.13E-04
19GO:0017089: glycolipid transporter activity9.13E-04
20GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity9.13E-04
21GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity9.13E-04
22GO:0004499: N,N-dimethylaniline monooxygenase activity1.04E-03
23GO:0009916: alternative oxidase activity1.21E-03
24GO:0008891: glycolate oxidase activity1.21E-03
25GO:0015120: phosphoglycerate transmembrane transporter activity1.21E-03
26GO:0015368: calcium:cation antiporter activity1.21E-03
27GO:0004737: pyruvate decarboxylase activity1.21E-03
28GO:0042936: dipeptide transporter activity1.21E-03
29GO:0051861: glycolipid binding1.21E-03
30GO:0015369: calcium:proton antiporter activity1.21E-03
31GO:0046923: ER retention sequence binding1.21E-03
32GO:0005215: transporter activity1.31E-03
33GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity1.54E-03
34GO:0004866: endopeptidase inhibitor activity1.89E-03
35GO:0030976: thiamine pyrophosphate binding1.89E-03
36GO:0016301: kinase activity1.93E-03
37GO:0004012: phospholipid-translocating ATPase activity2.27E-03
38GO:0003978: UDP-glucose 4-epimerase activity2.27E-03
39GO:0004144: diacylglycerol O-acyltransferase activity2.27E-03
40GO:0016831: carboxy-lyase activity2.67E-03
41GO:0015491: cation:cation antiporter activity3.09E-03
42GO:0004714: transmembrane receptor protein tyrosine kinase activity3.09E-03
43GO:0015288: porin activity3.09E-03
44GO:0004674: protein serine/threonine kinase activity3.19E-03
45GO:0008308: voltage-gated anion channel activity3.54E-03
46GO:0050661: NADP binding4.30E-03
47GO:0015112: nitrate transmembrane transporter activity4.49E-03
48GO:0004364: glutathione transferase activity4.67E-03
49GO:0050660: flavin adenine dinucleotide binding5.68E-03
50GO:0004497: monooxygenase activity6.20E-03
51GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism6.61E-03
52GO:0004022: alcohol dehydrogenase (NAD) activity6.61E-03
53GO:0005315: inorganic phosphate transmembrane transporter activity6.61E-03
54GO:0005262: calcium channel activity6.61E-03
55GO:0015114: phosphate ion transmembrane transporter activity6.61E-03
56GO:0004190: aspartic-type endopeptidase activity7.79E-03
57GO:0004867: serine-type endopeptidase inhibitor activity7.79E-03
58GO:0008134: transcription factor binding9.03E-03
59GO:0005524: ATP binding1.01E-02
60GO:0004298: threonine-type endopeptidase activity1.03E-02
61GO:0033612: receptor serine/threonine kinase binding1.03E-02
62GO:0005451: monovalent cation:proton antiporter activity1.39E-02
63GO:0005199: structural constituent of cell wall1.47E-02
64GO:0015299: solute:proton antiporter activity1.54E-02
65GO:0010181: FMN binding1.54E-02
66GO:0004872: receptor activity1.62E-02
67GO:0004197: cysteine-type endopeptidase activity1.78E-02
68GO:0015385: sodium:proton antiporter activity1.87E-02
69GO:0008483: transaminase activity2.04E-02
70GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.06E-02
71GO:0051213: dioxygenase activity2.21E-02
72GO:0000287: magnesium ion binding2.46E-02
73GO:0004601: peroxidase activity2.51E-02
74GO:0004672: protein kinase activity2.62E-02
75GO:0020037: heme binding2.92E-02
76GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.96E-02
77GO:0030145: manganese ion binding2.96E-02
78GO:0030246: carbohydrate binding3.05E-02
79GO:0008233: peptidase activity3.06E-02
80GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.16E-02
81GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen4.01E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane3.18E-09
2GO:0009530: primary cell wall6.40E-04
3GO:0005886: plasma membrane1.49E-03
4GO:0005801: cis-Golgi network2.27E-03
5GO:0046930: pore complex3.54E-03
6GO:0019773: proteasome core complex, alpha-subunit complex3.54E-03
7GO:0070469: respiratory chain9.69E-03
8GO:0005741: mitochondrial outer membrane1.03E-02
9GO:0005839: proteasome core complex1.03E-02
10GO:0005576: extracellular region1.44E-02
11GO:0005770: late endosome1.47E-02
12GO:0005618: cell wall1.59E-02
13GO:0031969: chloroplast membrane3.11E-02
14GO:0005774: vacuolar membrane3.43E-02
15GO:0031225: anchored component of membrane3.67E-02
16GO:0048046: apoplast3.71E-02
17GO:0090406: pollen tube3.79E-02
18GO:0005743: mitochondrial inner membrane4.26E-02
19GO:0031966: mitochondrial membrane4.45E-02
20GO:0005783: endoplasmic reticulum4.55E-02
21GO:0000502: proteasome complex4.68E-02
Gene type



Gene DE type