co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G57960

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019279: L-methionine biosynthetic process from L-homoserine via cystathionine	0.00E+00
2	GO:0051180: vitamin transport	3.73E-06
3	GO:0019343: cysteine biosynthetic process via cystathionine	3.73E-06
4	GO:0030974: thiamine pyrophosphate transport	3.73E-06
5	GO:0071266: 'de novo' L-methionine biosynthetic process	3.73E-06
6	GO:0051775: response to redox state	3.73E-06
7	GO:0019346: transsulfuration	3.73E-06
8	GO:0015893: drug transport	1.03E-05
9	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	3.02E-05
10	GO:0006107: oxaloacetate metabolic process	3.02E-05
11	GO:0006734: NADH metabolic process	4.28E-05
12	GO:0010304: PSII associated light-harvesting complex II catabolic process	7.20E-05
13	GO:0009854: oxidative photosynthetic carbon pathway	8.84E-05
14	GO:0071482: cellular response to light stimulus	1.44E-04
15	GO:0010206: photosystem II repair	1.63E-04
16	GO:0010205: photoinhibition	1.84E-04
17	GO:0006108: malate metabolic process	2.72E-04
18	GO:0009768: photosynthesis, light harvesting in photosystem I	3.93E-04
19	GO:0042631: cellular response to water deprivation	5.49E-04
20	GO:0018298: protein-chromophore linkage	9.92E-04
21	GO:0010218: response to far red light	1.06E-03
22	GO:0009637: response to blue light	1.15E-03
23	GO:0009853: photorespiration	1.15E-03
24	GO:0006099: tricarboxylic acid cycle	1.19E-03
25	GO:0006839: mitochondrial transport	1.25E-03
26	GO:0006810: transport	1.89E-03
27	GO:0015979: photosynthesis	5.15E-03
28	GO:0032259: methylation	5.97E-03
29	GO:0008152: metabolic process	6.58E-03
30	GO:0006979: response to oxidative stress	1.52E-02
31	GO:0005975: carbohydrate metabolic process	2.03E-02
32	GO:0007275: multicellular organism development	2.45E-02
33	GO:0006508: proteolysis	3.36E-02
34	GO:0055114: oxidation-reduction process	3.90E-02

Rank	GO Term	Adjusted P value
1	GO:0008465: glycerate dehydrogenase activity	0.00E+00
2	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
3	GO:0008746: NAD(P)+ transhydrogenase activity	3.73E-06
4	GO:0004123: cystathionine gamma-lyase activity	3.73E-06
5	GO:0090422: thiamine pyrophosphate transporter activity	3.73E-06
6	GO:0004121: cystathionine beta-lyase activity	3.73E-06
7	GO:0018708: thiol S-methyltransferase activity	1.03E-05
8	GO:0003962: cystathionine gamma-synthase activity	1.93E-05
9	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	4.28E-05
10	GO:0016615: malate dehydrogenase activity	7.20E-05
11	GO:0030060: L-malate dehydrogenase activity	8.84E-05
12	GO:0008266: poly(U) RNA binding	2.95E-04
13	GO:0031409: pigment binding	3.43E-04
14	GO:0004176: ATP-dependent peptidase activity	4.18E-04
15	GO:0048038: quinone binding	6.61E-04
16	GO:0008237: metallopeptidase activity	7.77E-04
17	GO:0016168: chlorophyll binding	8.68E-04
18	GO:0004222: metalloendopeptidase activity	1.06E-03
19	GO:0051287: NAD binding	1.54E-03
20	GO:0030170: pyridoxal phosphate binding	2.61E-03
21	GO:0008168: methyltransferase activity	3.96E-03
22	GO:0016887: ATPase activity	8.34E-03
23	GO:0005215: transporter activity	1.62E-02
24	GO:0016787: hydrolase activity	2.60E-02

Rank	GO Term	Adjusted P value
1	GO:0009535: chloroplast thylakoid membrane	1.51E-05
2	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.63E-04
3	GO:0009507: chloroplast	1.82E-04
4	GO:0030076: light-harvesting complex	3.19E-04
5	GO:0009522: photosystem I	6.04E-04
6	GO:0009523: photosystem II	6.32E-04
7	GO:0009941: chloroplast envelope	7.20E-04
8	GO:0009579: thylakoid	7.90E-04
9	GO:0031977: thylakoid lumen	1.29E-03
10	GO:0010287: plastoglobule	2.35E-03
11	GO:0048046: apoplast	4.60E-03
12	GO:0005743: mitochondrial inner membrane	5.85E-03
13	GO:0009570: chloroplast stroma	8.29E-03
14	GO:0005777: peroxisome	1.01E-02
15	GO:0009534: chloroplast thylakoid	1.05E-02
16	GO:0005739: mitochondrion	3.75E-02