GO Enrichment Analysis of Co-expressed Genes with
AT5G57700
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 2 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 3 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 4 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 5 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 6 | GO:0042493: response to drug | 0.00E+00 |
| 7 | GO:0042371: vitamin K biosynthetic process | 0.00E+00 |
| 8 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 9 | GO:0006412: translation | 6.61E-17 |
| 10 | GO:0032544: plastid translation | 7.43E-12 |
| 11 | GO:0042254: ribosome biogenesis | 2.00E-11 |
| 12 | GO:0009773: photosynthetic electron transport in photosystem I | 1.07E-08 |
| 13 | GO:0015979: photosynthesis | 3.38E-08 |
| 14 | GO:0009735: response to cytokinin | 1.07E-07 |
| 15 | GO:0010196: nonphotochemical quenching | 5.75E-06 |
| 16 | GO:0090391: granum assembly | 1.57E-05 |
| 17 | GO:0010027: thylakoid membrane organization | 6.40E-05 |
| 18 | GO:0015995: chlorophyll biosynthetic process | 8.72E-05 |
| 19 | GO:0009658: chloroplast organization | 1.21E-04 |
| 20 | GO:0042372: phylloquinone biosynthetic process | 1.95E-04 |
| 21 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.04E-04 |
| 22 | GO:0009772: photosynthetic electron transport in photosystem II | 2.54E-04 |
| 23 | GO:0042335: cuticle development | 2.86E-04 |
| 24 | GO:0043489: RNA stabilization | 3.11E-04 |
| 25 | GO:1904966: positive regulation of vitamin E biosynthetic process | 3.11E-04 |
| 26 | GO:1904964: positive regulation of phytol biosynthetic process | 3.11E-04 |
| 27 | GO:0042759: long-chain fatty acid biosynthetic process | 3.11E-04 |
| 28 | GO:0071588: hydrogen peroxide mediated signaling pathway | 3.11E-04 |
| 29 | GO:0016042: lipid catabolic process | 4.33E-04 |
| 30 | GO:0009828: plant-type cell wall loosening | 5.37E-04 |
| 31 | GO:0006949: syncytium formation | 6.53E-04 |
| 32 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 6.81E-04 |
| 33 | GO:0010024: phytochromobilin biosynthetic process | 6.81E-04 |
| 34 | GO:0010143: cutin biosynthetic process | 1.09E-03 |
| 35 | GO:0010207: photosystem II assembly | 1.09E-03 |
| 36 | GO:0006788: heme oxidation | 1.10E-03 |
| 37 | GO:0006013: mannose metabolic process | 1.10E-03 |
| 38 | GO:0009650: UV protection | 1.58E-03 |
| 39 | GO:0046739: transport of virus in multicellular host | 1.58E-03 |
| 40 | GO:1901332: negative regulation of lateral root development | 1.58E-03 |
| 41 | GO:0006986: response to unfolded protein | 1.58E-03 |
| 42 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.58E-03 |
| 43 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.58E-03 |
| 44 | GO:0009152: purine ribonucleotide biosynthetic process | 1.58E-03 |
| 45 | GO:0046653: tetrahydrofolate metabolic process | 1.58E-03 |
| 46 | GO:0009451: RNA modification | 1.64E-03 |
| 47 | GO:0045727: positive regulation of translation | 2.12E-03 |
| 48 | GO:0015994: chlorophyll metabolic process | 2.12E-03 |
| 49 | GO:0009664: plant-type cell wall organization | 2.31E-03 |
| 50 | GO:0006564: L-serine biosynthetic process | 2.71E-03 |
| 51 | GO:0010236: plastoquinone biosynthetic process | 2.71E-03 |
| 52 | GO:0031365: N-terminal protein amino acid modification | 2.71E-03 |
| 53 | GO:0006461: protein complex assembly | 2.71E-03 |
| 54 | GO:0000413: protein peptidyl-prolyl isomerization | 2.76E-03 |
| 55 | GO:0009826: unidimensional cell growth | 2.91E-03 |
| 56 | GO:0009913: epidermal cell differentiation | 3.35E-03 |
| 57 | GO:0010190: cytochrome b6f complex assembly | 3.35E-03 |
| 58 | GO:0042549: photosystem II stabilization | 3.35E-03 |
| 59 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 3.35E-03 |
| 60 | GO:0000470: maturation of LSU-rRNA | 3.35E-03 |
| 61 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.03E-03 |
| 62 | GO:0006694: steroid biosynthetic process | 4.03E-03 |
| 63 | GO:0010019: chloroplast-nucleus signaling pathway | 4.03E-03 |
| 64 | GO:0006400: tRNA modification | 4.76E-03 |
| 65 | GO:0009395: phospholipid catabolic process | 4.76E-03 |
| 66 | GO:0008610: lipid biosynthetic process | 5.53E-03 |
| 67 | GO:0042255: ribosome assembly | 5.53E-03 |
| 68 | GO:0006353: DNA-templated transcription, termination | 5.53E-03 |
| 69 | GO:0030091: protein repair | 5.53E-03 |
| 70 | GO:0006605: protein targeting | 5.53E-03 |
| 71 | GO:0048564: photosystem I assembly | 5.53E-03 |
| 72 | GO:0045454: cell redox homeostasis | 5.64E-03 |
| 73 | GO:0009627: systemic acquired resistance | 5.93E-03 |
| 74 | GO:0010497: plasmodesmata-mediated intercellular transport | 6.33E-03 |
| 75 | GO:0009657: plastid organization | 6.33E-03 |
| 76 | GO:0009808: lignin metabolic process | 6.33E-03 |
| 77 | GO:0006869: lipid transport | 6.49E-03 |
| 78 | GO:0018298: protein-chromophore linkage | 6.93E-03 |
| 79 | GO:0045490: pectin catabolic process | 7.97E-03 |
| 80 | GO:0009631: cold acclimation | 8.02E-03 |
| 81 | GO:0006779: porphyrin-containing compound biosynthetic process | 8.07E-03 |
| 82 | GO:0006782: protoporphyrinogen IX biosynthetic process | 9.00E-03 |
| 83 | GO:0034599: cellular response to oxidative stress | 9.20E-03 |
| 84 | GO:0043085: positive regulation of catalytic activity | 9.96E-03 |
| 85 | GO:0018119: peptidyl-cysteine S-nitrosylation | 9.96E-03 |
| 86 | GO:0000038: very long-chain fatty acid metabolic process | 9.96E-03 |
| 87 | GO:0030001: metal ion transport | 1.00E-02 |
| 88 | GO:0009409: response to cold | 1.05E-02 |
| 89 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.10E-02 |
| 90 | GO:0010114: response to red light | 1.14E-02 |
| 91 | GO:2000012: regulation of auxin polar transport | 1.20E-02 |
| 92 | GO:0006006: glucose metabolic process | 1.20E-02 |
| 93 | GO:0019253: reductive pentose-phosphate cycle | 1.31E-02 |
| 94 | GO:0010025: wax biosynthetic process | 1.53E-02 |
| 95 | GO:0000027: ribosomal large subunit assembly | 1.65E-02 |
| 96 | GO:0007017: microtubule-based process | 1.77E-02 |
| 97 | GO:0009695: jasmonic acid biosynthetic process | 1.77E-02 |
| 98 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.77E-02 |
| 99 | GO:0009416: response to light stimulus | 1.84E-02 |
| 100 | GO:0031408: oxylipin biosynthetic process | 1.89E-02 |
| 101 | GO:0016226: iron-sulfur cluster assembly | 2.01E-02 |
| 102 | GO:0030245: cellulose catabolic process | 2.01E-02 |
| 103 | GO:0009411: response to UV | 2.14E-02 |
| 104 | GO:0019722: calcium-mediated signaling | 2.27E-02 |
| 105 | GO:0009306: protein secretion | 2.27E-02 |
| 106 | GO:0080022: primary root development | 2.55E-02 |
| 107 | GO:0008033: tRNA processing | 2.55E-02 |
| 108 | GO:0006662: glycerol ether metabolic process | 2.68E-02 |
| 109 | GO:0015986: ATP synthesis coupled proton transport | 2.83E-02 |
| 110 | GO:0000302: response to reactive oxygen species | 3.12E-02 |
| 111 | GO:0016132: brassinosteroid biosynthetic process | 3.12E-02 |
| 112 | GO:0042744: hydrogen peroxide catabolic process | 3.12E-02 |
| 113 | GO:0009790: embryo development | 3.20E-02 |
| 114 | GO:0032502: developmental process | 3.27E-02 |
| 115 | GO:0006810: transport | 3.41E-02 |
| 116 | GO:0007267: cell-cell signaling | 3.73E-02 |
| 117 | GO:0009739: response to gibberellin | 4.23E-02 |
| 118 | GO:0006888: ER to Golgi vesicle-mediated transport | 4.55E-02 |
| 119 | GO:0016311: dephosphorylation | 4.72E-02 |
| 120 | GO:0009817: defense response to fungus, incompatible interaction | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 2 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 3 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 4 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 5 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 6 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 7 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 8 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 9 | GO:0019843: rRNA binding | 1.43E-26 |
| 10 | GO:0003735: structural constituent of ribosome | 7.51E-19 |
| 11 | GO:0016788: hydrolase activity, acting on ester bonds | 1.08E-07 |
| 12 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.27E-05 |
| 13 | GO:0052689: carboxylic ester hydrolase activity | 3.93E-05 |
| 14 | GO:0008266: poly(U) RNA binding | 7.21E-05 |
| 15 | GO:0005528: FK506 binding | 1.19E-04 |
| 16 | GO:0051920: peroxiredoxin activity | 1.95E-04 |
| 17 | GO:0030570: pectate lyase activity | 2.04E-04 |
| 18 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 3.11E-04 |
| 19 | GO:0004321: fatty-acyl-CoA synthase activity | 3.11E-04 |
| 20 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 3.11E-04 |
| 21 | GO:0016209: antioxidant activity | 3.21E-04 |
| 22 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 6.81E-04 |
| 23 | GO:0016630: protochlorophyllide reductase activity | 6.81E-04 |
| 24 | GO:0047746: chlorophyllase activity | 6.81E-04 |
| 25 | GO:0004617: phosphoglycerate dehydrogenase activity | 6.81E-04 |
| 26 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 6.81E-04 |
| 27 | GO:0004565: beta-galactosidase activity | 9.73E-04 |
| 28 | GO:0050734: hydroxycinnamoyltransferase activity | 1.10E-03 |
| 29 | GO:0030267: glyoxylate reductase (NADP) activity | 1.10E-03 |
| 30 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 1.10E-03 |
| 31 | GO:0008864: formyltetrahydrofolate deformylase activity | 1.10E-03 |
| 32 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 1.10E-03 |
| 33 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 1.10E-03 |
| 34 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 1.10E-03 |
| 35 | GO:0016851: magnesium chelatase activity | 1.58E-03 |
| 36 | GO:0043023: ribosomal large subunit binding | 1.58E-03 |
| 37 | GO:0008097: 5S rRNA binding | 1.58E-03 |
| 38 | GO:0001872: (1->3)-beta-D-glucan binding | 1.58E-03 |
| 39 | GO:0043495: protein anchor | 2.12E-03 |
| 40 | GO:0004392: heme oxygenase (decyclizing) activity | 2.12E-03 |
| 41 | GO:0004659: prenyltransferase activity | 2.12E-03 |
| 42 | GO:0003723: RNA binding | 2.68E-03 |
| 43 | GO:0004040: amidase activity | 2.71E-03 |
| 44 | GO:0003959: NADPH dehydrogenase activity | 2.71E-03 |
| 45 | GO:0004130: cytochrome-c peroxidase activity | 3.35E-03 |
| 46 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 3.35E-03 |
| 47 | GO:0016208: AMP binding | 3.35E-03 |
| 48 | GO:0016688: L-ascorbate peroxidase activity | 3.35E-03 |
| 49 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 3.35E-03 |
| 50 | GO:0046872: metal ion binding | 3.49E-03 |
| 51 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 4.03E-03 |
| 52 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 4.03E-03 |
| 53 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 4.03E-03 |
| 54 | GO:0004559: alpha-mannosidase activity | 4.03E-03 |
| 55 | GO:0019899: enzyme binding | 4.76E-03 |
| 56 | GO:0008235: metalloexopeptidase activity | 4.76E-03 |
| 57 | GO:0004033: aldo-keto reductase (NADP) activity | 5.53E-03 |
| 58 | GO:0052747: sinapyl alcohol dehydrogenase activity | 5.53E-03 |
| 59 | GO:0016168: chlorophyll binding | 5.62E-03 |
| 60 | GO:0016829: lyase activity | 5.84E-03 |
| 61 | GO:0016207: 4-coumarate-CoA ligase activity | 7.19E-03 |
| 62 | GO:0047617: acyl-CoA hydrolase activity | 8.07E-03 |
| 63 | GO:0008047: enzyme activator activity | 9.00E-03 |
| 64 | GO:0003993: acid phosphatase activity | 9.20E-03 |
| 65 | GO:0004177: aminopeptidase activity | 9.96E-03 |
| 66 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 1.10E-02 |
| 67 | GO:0008378: galactosyltransferase activity | 1.10E-02 |
| 68 | GO:0008289: lipid binding | 1.28E-02 |
| 69 | GO:0051287: NAD binding | 1.38E-02 |
| 70 | GO:0004601: peroxidase activity | 1.39E-02 |
| 71 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.53E-02 |
| 72 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.53E-02 |
| 73 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.53E-02 |
| 74 | GO:0031409: pigment binding | 1.53E-02 |
| 75 | GO:0005509: calcium ion binding | 1.56E-02 |
| 76 | GO:0051536: iron-sulfur cluster binding | 1.65E-02 |
| 77 | GO:0051087: chaperone binding | 1.77E-02 |
| 78 | GO:0008810: cellulase activity | 2.14E-02 |
| 79 | GO:0022891: substrate-specific transmembrane transporter activity | 2.14E-02 |
| 80 | GO:0016746: transferase activity, transferring acyl groups | 2.26E-02 |
| 81 | GO:0003727: single-stranded RNA binding | 2.27E-02 |
| 82 | GO:0047134: protein-disulfide reductase activity | 2.41E-02 |
| 83 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 2.68E-02 |
| 84 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 2.68E-02 |
| 85 | GO:0008080: N-acetyltransferase activity | 2.68E-02 |
| 86 | GO:0050662: coenzyme binding | 2.83E-02 |
| 87 | GO:0004791: thioredoxin-disulfide reductase activity | 2.83E-02 |
| 88 | GO:0016491: oxidoreductase activity | 2.84E-02 |
| 89 | GO:0004518: nuclease activity | 3.27E-02 |
| 90 | GO:0004519: endonuclease activity | 3.30E-02 |
| 91 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.42E-02 |
| 92 | GO:0003729: mRNA binding | 3.48E-02 |
| 93 | GO:0016791: phosphatase activity | 3.58E-02 |
| 94 | GO:0005200: structural constituent of cytoskeleton | 3.73E-02 |
| 95 | GO:0016597: amino acid binding | 3.89E-02 |
| 96 | GO:0030247: polysaccharide binding | 4.55E-02 |
| 97 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 2.17E-42 |
| 4 | GO:0009570: chloroplast stroma | 6.26E-40 |
| 5 | GO:0009941: chloroplast envelope | 6.48E-32 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 5.10E-24 |
| 7 | GO:0009579: thylakoid | 6.41E-24 |
| 8 | GO:0009534: chloroplast thylakoid | 1.58E-18 |
| 9 | GO:0005840: ribosome | 1.75E-18 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 5.57E-15 |
| 11 | GO:0031977: thylakoid lumen | 9.28E-13 |
| 12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.57E-07 |
| 13 | GO:0009654: photosystem II oxygen evolving complex | 5.59E-06 |
| 14 | GO:0048046: apoplast | 1.70E-05 |
| 15 | GO:0019898: extrinsic component of membrane | 2.70E-05 |
| 16 | GO:0000311: plastid large ribosomal subunit | 4.85E-05 |
| 17 | GO:0030095: chloroplast photosystem II | 7.21E-05 |
| 18 | GO:0016020: membrane | 1.67E-04 |
| 19 | GO:0009533: chloroplast stromal thylakoid | 2.54E-04 |
| 20 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 3.11E-04 |
| 21 | GO:0009547: plastid ribosome | 3.11E-04 |
| 22 | GO:0010287: plastoglobule | 8.99E-04 |
| 23 | GO:0031969: chloroplast membrane | 9.69E-04 |
| 24 | GO:0000312: plastid small ribosomal subunit | 1.09E-03 |
| 25 | GO:0010007: magnesium chelatase complex | 1.10E-03 |
| 26 | GO:0005576: extracellular region | 1.32E-03 |
| 27 | GO:0015630: microtubule cytoskeleton | 1.58E-03 |
| 28 | GO:0042651: thylakoid membrane | 1.66E-03 |
| 29 | GO:0015935: small ribosomal subunit | 1.82E-03 |
| 30 | GO:0005618: cell wall | 2.26E-03 |
| 31 | GO:0009505: plant-type cell wall | 2.97E-03 |
| 32 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 3.35E-03 |
| 33 | GO:0009523: photosystem II | 3.43E-03 |
| 34 | GO:0031225: anchored component of membrane | 3.47E-03 |
| 35 | GO:0010319: stromule | 4.73E-03 |
| 36 | GO:0015934: large ribosomal subunit | 8.02E-03 |
| 37 | GO:0090404: pollen tube tip | 9.96E-03 |
| 38 | GO:0046658: anchored component of plasma membrane | 1.14E-02 |
| 39 | GO:0030076: light-harvesting complex | 1.42E-02 |
| 40 | GO:0022625: cytosolic large ribosomal subunit | 1.95E-02 |
| 41 | GO:0005777: peroxisome | 2.26E-02 |
| 42 | GO:0009536: plastid | 2.52E-02 |
| 43 | GO:0009522: photosystem I | 2.83E-02 |
| 44 | GO:0009295: nucleoid | 3.73E-02 |
| 45 | GO:0005778: peroxisomal membrane | 3.73E-02 |
| 46 | GO:0030529: intracellular ribonucleoprotein complex | 4.05E-02 |
| 47 | GO:0022627: cytosolic small ribosomal subunit | 4.98E-02 |