co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G57655

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042906: xanthine transport	0.00E+00
2	GO:0046459: short-chain fatty acid metabolic process	0.00E+00
3	GO:0006725: cellular aromatic compound metabolic process	0.00E+00
4	GO:0010241: ent-kaurene oxidation to kaurenoic acid	0.00E+00
5	GO:0051928: positive regulation of calcium ion transport	0.00E+00
6	GO:0042344: indole glucosinolate catabolic process	1.29E-05
7	GO:0009817: defense response to fungus, incompatible interaction	7.88E-05
8	GO:1990641: response to iron ion starvation	2.80E-04
9	GO:1902265: abscisic acid homeostasis	2.80E-04
10	GO:0071366: cellular response to indolebutyric acid stimulus	2.80E-04
11	GO:1903409: reactive oxygen species biosynthetic process	2.80E-04
12	GO:0046167: glycerol-3-phosphate biosynthetic process	2.80E-04
13	GO:1900060: negative regulation of ceramide biosynthetic process	2.80E-04
14	GO:0010286: heat acclimation	4.74E-04
15	GO:0006641: triglyceride metabolic process	6.14E-04
16	GO:0015857: uracil transport	6.14E-04
17	GO:0006101: citrate metabolic process	6.14E-04
18	GO:0030003: cellular cation homeostasis	6.14E-04
19	GO:0009308: amine metabolic process	6.14E-04
20	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	6.14E-04
21	GO:0090156: cellular sphingolipid homeostasis	6.14E-04
22	GO:0015720: allantoin transport	6.14E-04
23	GO:0052544: defense response by callose deposition in cell wall	6.45E-04
24	GO:0006954: inflammatory response	9.96E-04
25	GO:0019563: glycerol catabolic process	9.96E-04
26	GO:0046786: viral replication complex formation and maintenance	9.96E-04
27	GO:0071705: nitrogen compound transport	9.96E-04
28	GO:0090630: activation of GTPase activity	9.96E-04
29	GO:0030029: actin filament-based process	9.96E-04
30	GO:0034976: response to endoplasmic reticulum stress	1.16E-03
31	GO:0042742: defense response to bacterium	1.27E-03
32	GO:0006072: glycerol-3-phosphate metabolic process	1.42E-03
33	GO:0015749: monosaccharide transport	1.42E-03
34	GO:0006809: nitric oxide biosynthetic process	1.42E-03
35	GO:0009963: positive regulation of flavonoid biosynthetic process	1.42E-03
36	GO:0009113: purine nucleobase biosynthetic process	1.42E-03
37	GO:1901332: negative regulation of lateral root development	1.42E-03
38	GO:0006882: cellular zinc ion homeostasis	1.42E-03
39	GO:0051259: protein oligomerization	1.42E-03
40	GO:0019438: aromatic compound biosynthetic process	1.42E-03
41	GO:0006624: vacuolar protein processing	1.42E-03
42	GO:0071215: cellular response to abscisic acid stimulus	1.86E-03
43	GO:0006012: galactose metabolic process	1.86E-03
44	GO:1902584: positive regulation of response to water deprivation	1.91E-03
45	GO:0010600: regulation of auxin biosynthetic process	1.91E-03
46	GO:0010188: response to microbial phytotoxin	1.91E-03
47	GO:0006878: cellular copper ion homeostasis	1.91E-03
48	GO:0006646: phosphatidylethanolamine biosynthetic process	1.91E-03
49	GO:0010222: stem vascular tissue pattern formation	1.91E-03
50	GO:0009687: abscisic acid metabolic process	1.91E-03
51	GO:0051603: proteolysis involved in cellular protein catabolic process	2.16E-03
52	GO:0043097: pyrimidine nucleoside salvage	2.43E-03
53	GO:0046323: glucose import	2.54E-03
54	GO:0048544: recognition of pollen	2.73E-03
55	GO:0008654: phospholipid biosynthetic process	2.93E-03
56	GO:0006206: pyrimidine nucleobase metabolic process	3.00E-03
57	GO:0000741: karyogamy	3.00E-03
58	GO:0015691: cadmium ion transport	3.00E-03
59	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	3.00E-03
60	GO:0006635: fatty acid beta-oxidation	3.14E-03
61	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	3.62E-03
62	GO:0006694: steroid biosynthetic process	3.62E-03
63	GO:0009396: folic acid-containing compound biosynthetic process	4.26E-03
64	GO:0006333: chromatin assembly or disassembly	4.26E-03
65	GO:0010044: response to aluminum ion	4.26E-03
66	GO:0009395: phospholipid catabolic process	4.26E-03
67	GO:0001666: response to hypoxia	4.53E-03
68	GO:0009061: anaerobic respiration	4.95E-03
69	GO:0010928: regulation of auxin mediated signaling pathway	4.95E-03
70	GO:0009819: drought recovery	4.95E-03
71	GO:0006102: isocitrate metabolic process	4.95E-03
72	GO:0016559: peroxisome fission	4.95E-03
73	GO:0006644: phospholipid metabolic process	4.95E-03
74	GO:0009808: lignin metabolic process	5.67E-03
75	GO:0046916: cellular transition metal ion homeostasis	6.43E-03
76	GO:0006811: ion transport	6.51E-03
77	GO:0009737: response to abscisic acid	6.60E-03
78	GO:0010043: response to zinc ion	6.83E-03
79	GO:0035999: tetrahydrofolate interconversion	7.22E-03
80	GO:0006099: tricarboxylic acid cycle	7.83E-03
81	GO:0009970: cellular response to sulfate starvation	8.04E-03
82	GO:0055062: phosphate ion homeostasis	8.04E-03
83	GO:0006995: cellular response to nitrogen starvation	8.04E-03
84	GO:0006535: cysteine biosynthetic process from serine	8.04E-03
85	GO:0009641: shade avoidance	8.04E-03
86	GO:0010468: regulation of gene expression	8.14E-03
87	GO:0006816: calcium ion transport	8.90E-03
88	GO:0009682: induced systemic resistance	8.90E-03
89	GO:0030148: sphingolipid biosynthetic process	8.90E-03
90	GO:0006378: mRNA polyadenylation	8.90E-03
91	GO:0042542: response to hydrogen peroxide	9.29E-03
92	GO:0008643: carbohydrate transport	1.05E-02
93	GO:2000012: regulation of auxin polar transport	1.07E-02
94	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	1.07E-02
95	GO:0006807: nitrogen compound metabolic process	1.07E-02
96	GO:0002237: response to molecule of bacterial origin	1.17E-02
97	GO:0007034: vacuolar transport	1.17E-02
98	GO:0000165: MAPK cascade	1.17E-02
99	GO:0006970: response to osmotic stress	1.25E-02
100	GO:0007031: peroxisome organization	1.26E-02
101	GO:0019853: L-ascorbic acid biosynthetic process	1.26E-02
102	GO:0010030: positive regulation of seed germination	1.26E-02
103	GO:0055114: oxidation-reduction process	1.36E-02
104	GO:0009738: abscisic acid-activated signaling pathway	1.38E-02
105	GO:0009416: response to light stimulus	1.45E-02
106	GO:0019344: cysteine biosynthetic process	1.47E-02
107	GO:0080167: response to karrikin	1.49E-02
108	GO:0035556: intracellular signal transduction	1.57E-02
109	GO:0006874: cellular calcium ion homeostasis	1.58E-02
110	GO:0016192: vesicle-mediated transport	1.59E-02
111	GO:0044550: secondary metabolite biosynthetic process	1.66E-02
112	GO:0009269: response to desiccation	1.68E-02
113	GO:0031408: oxylipin biosynthetic process	1.68E-02
114	GO:0009651: response to salt stress	1.73E-02
115	GO:0007165: signal transduction	1.76E-02
116	GO:0035428: hexose transmembrane transport	1.80E-02
117	GO:0031348: negative regulation of defense response	1.80E-02
118	GO:0071456: cellular response to hypoxia	1.80E-02
119	GO:0019748: secondary metabolic process	1.80E-02
120	GO:0045454: cell redox homeostasis	1.87E-02
121	GO:0009693: ethylene biosynthetic process	1.91E-02
122	GO:0009686: gibberellin biosynthetic process	1.91E-02
123	GO:0010227: floral organ abscission	1.91E-02
124	GO:0006396: RNA processing	1.92E-02
125	GO:0006468: protein phosphorylation	2.01E-02
126	GO:0048443: stamen development	2.03E-02
127	GO:0006457: protein folding	2.13E-02
128	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.15E-02
129	GO:0042631: cellular response to water deprivation	2.27E-02
130	GO:0042391: regulation of membrane potential	2.27E-02
131	GO:0080022: primary root development	2.27E-02
132	GO:0015991: ATP hydrolysis coupled proton transport	2.27E-02
133	GO:0009960: endosperm development	2.39E-02
134	GO:0008360: regulation of cell shape	2.39E-02
135	GO:0006520: cellular amino acid metabolic process	2.39E-02
136	GO:0010197: polar nucleus fusion	2.39E-02
137	GO:0010182: sugar mediated signaling pathway	2.39E-02
138	GO:0006814: sodium ion transport	2.52E-02
139	GO:0009646: response to absence of light	2.52E-02
140	GO:0071281: cellular response to iron ion	3.05E-02
141	GO:0019760: glucosinolate metabolic process	3.19E-02
142	GO:0010252: auxin homeostasis	3.19E-02
143	GO:0010150: leaf senescence	3.22E-02
144	GO:0051607: defense response to virus	3.47E-02
145	GO:0016126: sterol biosynthetic process	3.62E-02
146	GO:0010029: regulation of seed germination	3.76E-02
147	GO:0009617: response to bacterium	3.84E-02
148	GO:0009627: systemic acquired resistance	3.91E-02
149	GO:0048573: photoperiodism, flowering	4.06E-02
150	GO:0006950: response to stress	4.06E-02
151	GO:0006979: response to oxidative stress	4.15E-02
152	GO:0008219: cell death	4.37E-02
153	GO:0007568: aging	4.84E-02
154	GO:0006865: amino acid transport	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
2	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
3	GO:0047172: shikimate O-hydroxycinnamoyltransferase activity	0.00E+00
4	GO:0016701: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	0.00E+00
5	GO:0052616: ent-kaur-16-en-19-ol oxidase activity	0.00E+00
6	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
7	GO:0052617: ent-kaur-16-en-19-al oxidase activity	0.00E+00
8	GO:0052615: ent-kaurene oxidase activity	0.00E+00
9	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
10	GO:0004370: glycerol kinase activity	0.00E+00
11	GO:0005272: sodium channel activity	0.00E+00
12	GO:0047205: quinate O-hydroxycinnamoyltransferase activity	0.00E+00
13	GO:0050897: cobalt ion binding	1.03E-04
14	GO:0004525: ribonuclease III activity	2.73E-04
15	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	2.80E-04
16	GO:0001530: lipopolysaccharide binding	2.80E-04
17	GO:0046870: cadmium ion binding	2.80E-04
18	GO:0004112: cyclic-nucleotide phosphodiesterase activity	2.80E-04
19	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	2.80E-04
20	GO:0030544: Hsp70 protein binding	2.80E-04
21	GO:0050200: plasmalogen synthase activity	2.80E-04
22	GO:0052595: aliphatic-amine oxidase activity	2.80E-04
23	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	2.80E-04
24	GO:0030275: LRR domain binding	2.80E-04
25	GO:0009679: hexose:proton symporter activity	2.80E-04
26	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	6.14E-04
27	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	6.14E-04
28	GO:0004352: glutamate dehydrogenase (NAD+) activity	6.14E-04
29	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	6.14E-04
30	GO:0004329: formate-tetrahydrofolate ligase activity	6.14E-04
31	GO:0019200: carbohydrate kinase activity	6.14E-04
32	GO:0047209: coniferyl-alcohol glucosyltransferase activity	6.14E-04
33	GO:0004353: glutamate dehydrogenase [NAD(P)+] activity	6.14E-04
34	GO:0004566: beta-glucuronidase activity	6.14E-04
35	GO:0032791: lead ion binding	6.14E-04
36	GO:0005274: allantoin uptake transmembrane transporter activity	6.14E-04
37	GO:0004609: phosphatidylserine decarboxylase activity	6.14E-04
38	GO:0003994: aconitate hydratase activity	6.14E-04
39	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	6.14E-04
40	GO:0017150: tRNA dihydrouridine synthase activity	9.96E-04
41	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	9.96E-04
42	GO:0004096: catalase activity	9.96E-04
43	GO:0005351: sugar:proton symporter activity	1.20E-03
44	GO:0048027: mRNA 5'-UTR binding	1.42E-03
45	GO:0015086: cadmium ion transmembrane transporter activity	1.42E-03
46	GO:0004108: citrate (Si)-synthase activity	1.42E-03
47	GO:0030527: structural constituent of chromatin	1.42E-03
48	GO:0004707: MAP kinase activity	1.56E-03
49	GO:0016301: kinase activity	1.69E-03
50	GO:0015210: uracil transmembrane transporter activity	1.91E-03
51	GO:0003995: acyl-CoA dehydrogenase activity	1.91E-03
52	GO:0004737: pyruvate decarboxylase activity	1.91E-03
53	GO:0005507: copper ion binding	2.11E-03
54	GO:0015145: monosaccharide transmembrane transporter activity	2.43E-03
55	GO:0008198: ferrous iron binding	2.43E-03
56	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	2.43E-03
57	GO:0003997: acyl-CoA oxidase activity	2.43E-03
58	GO:0010294: abscisic acid glucosyltransferase activity	2.43E-03
59	GO:0019137: thioglucosidase activity	3.00E-03
60	GO:0030976: thiamine pyrophosphate binding	3.00E-03
61	GO:0004197: cysteine-type endopeptidase activity	3.35E-03
62	GO:0070300: phosphatidic acid binding	3.62E-03
63	GO:0004849: uridine kinase activity	3.62E-03
64	GO:0005261: cation channel activity	3.62E-03
65	GO:0004124: cysteine synthase activity	3.62E-03
66	GO:0004620: phospholipase activity	4.26E-03
67	GO:0016831: carboxy-lyase activity	4.26E-03
68	GO:0005524: ATP binding	4.88E-03
69	GO:0004034: aldose 1-epimerase activity	4.95E-03
70	GO:0004033: aldo-keto reductase (NADP) activity	4.95E-03
71	GO:0015144: carbohydrate transmembrane transporter activity	5.42E-03
72	GO:0005267: potassium channel activity	5.67E-03
73	GO:0005096: GTPase activator activity	6.21E-03
74	GO:0000989: transcription factor activity, transcription factor binding	6.43E-03
75	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	6.43E-03
76	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	7.22E-03
77	GO:0008171: O-methyltransferase activity	8.04E-03
78	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	8.81E-03
79	GO:0004177: aminopeptidase activity	8.90E-03
80	GO:0047372: acylglycerol lipase activity	8.90E-03
81	GO:0000976: transcription regulatory region sequence-specific DNA binding	9.79E-03
82	GO:0020037: heme binding	1.03E-02
83	GO:0008081: phosphoric diester hydrolase activity	1.07E-02
84	GO:0005262: calcium channel activity	1.07E-02
85	GO:0004175: endopeptidase activity	1.17E-02
86	GO:0008131: primary amine oxidase activity	1.17E-02
87	GO:0031624: ubiquitin conjugating enzyme binding	1.17E-02
88	GO:0005217: intracellular ligand-gated ion channel activity	1.26E-02
89	GO:0004970: ionotropic glutamate receptor activity	1.26E-02
90	GO:0030552: cAMP binding	1.26E-02
91	GO:0030553: cGMP binding	1.26E-02
92	GO:0005506: iron ion binding	1.32E-02
93	GO:0043424: protein histidine kinase binding	1.58E-02
94	GO:0005216: ion channel activity	1.58E-02
95	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.68E-02
96	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.70E-02
97	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.70E-02
98	GO:0003756: protein disulfide isomerase activity	2.03E-02
99	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.06E-02
100	GO:0030246: carbohydrate binding	2.26E-02
101	GO:0030551: cyclic nucleotide binding	2.27E-02
102	GO:0005249: voltage-gated potassium channel activity	2.27E-02
103	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.40E-02
104	GO:0019825: oxygen binding	2.45E-02
105	GO:0005355: glucose transmembrane transporter activity	2.52E-02
106	GO:0008270: zinc ion binding	2.71E-02
107	GO:0048038: quinone binding	2.78E-02
108	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.05E-02
109	GO:0008237: metallopeptidase activity	3.33E-02
110	GO:0005200: structural constituent of cytoskeleton	3.33E-02
111	GO:0008194: UDP-glycosyltransferase activity	3.61E-02
112	GO:0051213: dioxygenase activity	3.62E-02
113	GO:0005509: calcium ion binding	3.65E-02
114	GO:0004674: protein serine/threonine kinase activity	3.78E-02
115	GO:0102483: scopolin beta-glucosidase activity	4.06E-02
116	GO:0030247: polysaccharide binding	4.06E-02
117	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.21E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	7.69E-06
2	GO:0000323: lytic vacuole	2.89E-05
3	GO:0005777: peroxisome	7.53E-05
4	GO:0035339: SPOTS complex	2.80E-04
5	GO:0005773: vacuole	4.81E-04
6	GO:0005886: plasma membrane	5.32E-04
7	GO:0005849: mRNA cleavage factor complex	1.42E-03
8	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.91E-03
9	GO:0010008: endosome membrane	2.66E-03
10	GO:0005851: eukaryotic translation initiation factor 2B complex	3.00E-03
11	GO:0000815: ESCRT III complex	3.62E-03
12	GO:0016020: membrane	4.33E-03
13	GO:0005779: integral component of peroxisomal membrane	5.67E-03
14	GO:0009514: glyoxysome	5.67E-03
15	GO:0005783: endoplasmic reticulum	6.75E-03
16	GO:0005737: cytoplasm	7.40E-03
17	GO:0005765: lysosomal membrane	8.90E-03
18	GO:0005764: lysosome	1.17E-02
19	GO:0005829: cytosol	2.11E-02
20	GO:0031965: nuclear membrane	2.65E-02
21	GO:0043231: intracellular membrane-bounded organelle	2.75E-02
22	GO:0000785: chromatin	2.91E-02
23	GO:0005778: peroxisomal membrane	3.33E-02
24	GO:0005768: endosome	3.52E-02
25	GO:0005615: extracellular space	3.61E-02
26	GO:0009707: chloroplast outer membrane	4.37E-02
27	GO:0000151: ubiquitin ligase complex	4.37E-02
28	GO:0005774: vacuolar membrane	4.50E-02
29	GO:0000786: nucleosome	5.00E-02