GO Enrichment Analysis of Co-expressed Genes with
AT5G57345
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 2 | GO:0046677: response to antibiotic | 0.00E+00 |
| 3 | GO:0015810: aspartate transport | 0.00E+00 |
| 4 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 5 | GO:1903508: positive regulation of nucleic acid-templated transcription | 0.00E+00 |
| 6 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 7 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
| 8 | GO:0070584: mitochondrion morphogenesis | 0.00E+00 |
| 9 | GO:0015827: tryptophan transport | 0.00E+00 |
| 10 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 11 | GO:0015979: photosynthesis | 3.92E-19 |
| 12 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.75E-12 |
| 13 | GO:0015995: chlorophyll biosynthetic process | 3.84E-10 |
| 14 | GO:0018298: protein-chromophore linkage | 3.80E-08 |
| 15 | GO:0009769: photosynthesis, light harvesting in photosystem II | 1.81E-07 |
| 16 | GO:0010114: response to red light | 6.07E-06 |
| 17 | GO:0009645: response to low light intensity stimulus | 2.90E-05 |
| 18 | GO:0006824: cobalt ion transport | 7.75E-05 |
| 19 | GO:0010218: response to far red light | 7.92E-05 |
| 20 | GO:0009637: response to blue light | 9.75E-05 |
| 21 | GO:0009644: response to high light intensity | 1.58E-04 |
| 22 | GO:0051262: protein tetramerization | 1.85E-04 |
| 23 | GO:0034755: iron ion transmembrane transport | 1.85E-04 |
| 24 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 1.85E-04 |
| 25 | GO:0009269: response to desiccation | 2.78E-04 |
| 26 | GO:0055114: oxidation-reduction process | 3.35E-04 |
| 27 | GO:0044211: CTP salvage | 4.49E-04 |
| 28 | GO:0071786: endoplasmic reticulum tubular network organization | 4.49E-04 |
| 29 | GO:0009765: photosynthesis, light harvesting | 5.98E-04 |
| 30 | GO:2000306: positive regulation of photomorphogenesis | 5.98E-04 |
| 31 | GO:0010600: regulation of auxin biosynthetic process | 5.98E-04 |
| 32 | GO:0044206: UMP salvage | 5.98E-04 |
| 33 | GO:0030104: water homeostasis | 5.98E-04 |
| 34 | GO:0042938: dipeptide transport | 5.98E-04 |
| 35 | GO:0034052: positive regulation of plant-type hypersensitive response | 7.57E-04 |
| 36 | GO:0043097: pyrimidine nucleoside salvage | 7.57E-04 |
| 37 | GO:0016123: xanthophyll biosynthetic process | 7.57E-04 |
| 38 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 9.24E-04 |
| 39 | GO:0045962: positive regulation of development, heterochronic | 9.24E-04 |
| 40 | GO:0006206: pyrimidine nucleobase metabolic process | 9.24E-04 |
| 41 | GO:0009635: response to herbicide | 9.24E-04 |
| 42 | GO:0009416: response to light stimulus | 9.55E-04 |
| 43 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.10E-03 |
| 44 | GO:0010189: vitamin E biosynthetic process | 1.10E-03 |
| 45 | GO:0010196: nonphotochemical quenching | 1.29E-03 |
| 46 | GO:0010161: red light signaling pathway | 1.29E-03 |
| 47 | GO:0010928: regulation of auxin mediated signaling pathway | 1.48E-03 |
| 48 | GO:0009642: response to light intensity | 1.48E-03 |
| 49 | GO:0043068: positive regulation of programmed cell death | 1.48E-03 |
| 50 | GO:0009704: de-etiolation | 1.48E-03 |
| 51 | GO:0010099: regulation of photomorphogenesis | 1.69E-03 |
| 52 | GO:0007186: G-protein coupled receptor signaling pathway | 1.69E-03 |
| 53 | GO:0010206: photosystem II repair | 1.91E-03 |
| 54 | GO:0090333: regulation of stomatal closure | 1.91E-03 |
| 55 | GO:1900865: chloroplast RNA modification | 2.14E-03 |
| 56 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.14E-03 |
| 57 | GO:0006857: oligopeptide transport | 2.36E-03 |
| 58 | GO:0009688: abscisic acid biosynthetic process | 2.37E-03 |
| 59 | GO:0009641: shade avoidance | 2.37E-03 |
| 60 | GO:0009773: photosynthetic electron transport in photosystem I | 2.61E-03 |
| 61 | GO:0043085: positive regulation of catalytic activity | 2.61E-03 |
| 62 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.61E-03 |
| 63 | GO:0030148: sphingolipid biosynthetic process | 2.61E-03 |
| 64 | GO:0015706: nitrate transport | 2.86E-03 |
| 65 | GO:0009624: response to nematode | 3.12E-03 |
| 66 | GO:0018107: peptidyl-threonine phosphorylation | 3.12E-03 |
| 67 | GO:0009718: anthocyanin-containing compound biosynthetic process | 3.12E-03 |
| 68 | GO:0009767: photosynthetic electron transport chain | 3.12E-03 |
| 69 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.94E-03 |
| 70 | GO:0006874: cellular calcium ion homeostasis | 4.52E-03 |
| 71 | GO:0009735: response to cytokinin | 4.64E-03 |
| 72 | GO:0010017: red or far-red light signaling pathway | 5.13E-03 |
| 73 | GO:0009814: defense response, incompatible interaction | 5.13E-03 |
| 74 | GO:0007623: circadian rhythm | 5.37E-03 |
| 75 | GO:0071215: cellular response to abscisic acid stimulus | 5.45E-03 |
| 76 | GO:0009686: gibberellin biosynthetic process | 5.45E-03 |
| 77 | GO:0070417: cellular response to cold | 6.10E-03 |
| 78 | GO:0006662: glycerol ether metabolic process | 6.78E-03 |
| 79 | GO:0010182: sugar mediated signaling pathway | 6.78E-03 |
| 80 | GO:0007018: microtubule-based movement | 7.13E-03 |
| 81 | GO:0006814: sodium ion transport | 7.13E-03 |
| 82 | GO:0010193: response to ozone | 7.85E-03 |
| 83 | GO:0000302: response to reactive oxygen species | 7.85E-03 |
| 84 | GO:0009658: chloroplast organization | 8.30E-03 |
| 85 | GO:0006970: response to osmotic stress | 8.94E-03 |
| 86 | GO:0009723: response to ethylene | 9.61E-03 |
| 87 | GO:0044550: secondary metabolite biosynthetic process | 1.12E-02 |
| 88 | GO:0016311: dephosphorylation | 1.18E-02 |
| 89 | GO:0045454: cell redox homeostasis | 1.23E-02 |
| 90 | GO:0006811: ion transport | 1.31E-02 |
| 91 | GO:0010119: regulation of stomatal movement | 1.36E-02 |
| 92 | GO:0007568: aging | 1.36E-02 |
| 93 | GO:0006865: amino acid transport | 1.40E-02 |
| 94 | GO:0034599: cellular response to oxidative stress | 1.49E-02 |
| 95 | GO:0006629: lipid metabolic process | 1.52E-02 |
| 96 | GO:0042542: response to hydrogen peroxide | 1.68E-02 |
| 97 | GO:0051707: response to other organism | 1.73E-02 |
| 98 | GO:0009409: response to cold | 1.87E-02 |
| 99 | GO:0009965: leaf morphogenesis | 1.88E-02 |
| 100 | GO:0042538: hyperosmotic salinity response | 2.04E-02 |
| 101 | GO:0006812: cation transport | 2.04E-02 |
| 102 | GO:0009585: red, far-red light phototransduction | 2.14E-02 |
| 103 | GO:0010224: response to UV-B | 2.19E-02 |
| 104 | GO:0043086: negative regulation of catalytic activity | 2.41E-02 |
| 105 | GO:0009626: plant-type hypersensitive response | 2.52E-02 |
| 106 | GO:0009740: gibberellic acid mediated signaling pathway | 2.64E-02 |
| 107 | GO:0009611: response to wounding | 2.77E-02 |
| 108 | GO:0018105: peptidyl-serine phosphorylation | 2.81E-02 |
| 109 | GO:0035556: intracellular signal transduction | 2.86E-02 |
| 110 | GO:0009058: biosynthetic process | 3.35E-02 |
| 111 | GO:0009845: seed germination | 3.42E-02 |
| 112 | GO:0010468: regulation of gene expression | 4.60E-02 |
| 113 | GO:0008380: RNA splicing | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 3 | GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | 0.00E+00 |
| 4 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 5 | GO:0009899: ent-kaurene synthase activity | 0.00E+00 |
| 6 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 7 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 8 | GO:0031409: pigment binding | 3.24E-10 |
| 9 | GO:0016168: chlorophyll binding | 2.10E-08 |
| 10 | GO:0004462: lactoylglutathione lyase activity | 1.48E-05 |
| 11 | GO:0005227: calcium activated cation channel activity | 7.75E-05 |
| 12 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 7.75E-05 |
| 13 | GO:0052631: sphingolipid delta-8 desaturase activity | 7.75E-05 |
| 14 | GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | 7.75E-05 |
| 15 | GO:0016630: protochlorophyllide reductase activity | 1.85E-04 |
| 16 | GO:0019172: glyoxalase III activity | 1.85E-04 |
| 17 | GO:0015172: acidic amino acid transmembrane transporter activity | 1.85E-04 |
| 18 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.85E-04 |
| 19 | GO:0015171: amino acid transmembrane transporter activity | 2.46E-04 |
| 20 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 3.11E-04 |
| 21 | GO:0015175: neutral amino acid transmembrane transporter activity | 4.49E-04 |
| 22 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 4.49E-04 |
| 23 | GO:0016851: magnesium chelatase activity | 4.49E-04 |
| 24 | GO:0004930: G-protein coupled receptor activity | 5.98E-04 |
| 25 | GO:0004845: uracil phosphoribosyltransferase activity | 5.98E-04 |
| 26 | GO:0042936: dipeptide transporter activity | 5.98E-04 |
| 27 | GO:0051538: 3 iron, 4 sulfur cluster binding | 7.57E-04 |
| 28 | GO:0005261: cation channel activity | 1.10E-03 |
| 29 | GO:0004849: uridine kinase activity | 1.10E-03 |
| 30 | GO:0004602: glutathione peroxidase activity | 1.10E-03 |
| 31 | GO:0003993: acid phosphatase activity | 1.35E-03 |
| 32 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.69E-03 |
| 33 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.78E-03 |
| 34 | GO:0015293: symporter activity | 1.85E-03 |
| 35 | GO:0071949: FAD binding | 1.91E-03 |
| 36 | GO:0000989: transcription factor activity, transcription factor binding | 1.91E-03 |
| 37 | GO:0005381: iron ion transmembrane transporter activity | 2.14E-03 |
| 38 | GO:0008047: enzyme activator activity | 2.37E-03 |
| 39 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 2.37E-03 |
| 40 | GO:0047372: acylglycerol lipase activity | 2.61E-03 |
| 41 | GO:0004022: alcohol dehydrogenase (NAD) activity | 3.12E-03 |
| 42 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.12E-03 |
| 43 | GO:0015035: protein disulfide oxidoreductase activity | 3.22E-03 |
| 44 | GO:0005215: transporter activity | 3.22E-03 |
| 45 | GO:0005217: intracellular ligand-gated ion channel activity | 3.66E-03 |
| 46 | GO:0004970: ionotropic glutamate receptor activity | 3.66E-03 |
| 47 | GO:0005216: ion channel activity | 4.52E-03 |
| 48 | GO:0004707: MAP kinase activity | 4.82E-03 |
| 49 | GO:0004176: ATP-dependent peptidase activity | 4.82E-03 |
| 50 | GO:0008514: organic anion transmembrane transporter activity | 5.77E-03 |
| 51 | GO:0047134: protein-disulfide reductase activity | 6.10E-03 |
| 52 | GO:0004791: thioredoxin-disulfide reductase activity | 7.13E-03 |
| 53 | GO:0019901: protein kinase binding | 7.49E-03 |
| 54 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.59E-03 |
| 55 | GO:0016491: oxidoreductase activity | 1.80E-02 |
| 56 | GO:0005198: structural molecule activity | 1.88E-02 |
| 57 | GO:0003777: microtubule motor activity | 2.30E-02 |
| 58 | GO:0046872: metal ion binding | 2.41E-02 |
| 59 | GO:0016874: ligase activity | 2.64E-02 |
| 60 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.29E-02 |
| 61 | GO:0016829: lyase activity | 3.42E-02 |
| 62 | GO:0004252: serine-type endopeptidase activity | 3.48E-02 |
| 63 | GO:0015144: carbohydrate transmembrane transporter activity | 3.67E-02 |
| 64 | GO:0046910: pectinesterase inhibitor activity | 3.86E-02 |
| 65 | GO:0015297: antiporter activity | 3.93E-02 |
| 66 | GO:0005351: sugar:proton symporter activity | 3.99E-02 |
| 67 | GO:0005516: calmodulin binding | 4.07E-02 |
| 68 | GO:0008017: microtubule binding | 4.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 8.56E-25 |
| 3 | GO:0009534: chloroplast thylakoid | 8.27E-21 |
| 4 | GO:0009507: chloroplast | 5.05E-17 |
| 5 | GO:0009579: thylakoid | 4.59E-16 |
| 6 | GO:0009941: chloroplast envelope | 9.56E-15 |
| 7 | GO:0009522: photosystem I | 2.96E-13 |
| 8 | GO:0010287: plastoglobule | 1.86E-11 |
| 9 | GO:0009538: photosystem I reaction center | 1.10E-09 |
| 10 | GO:0009523: photosystem II | 4.19E-07 |
| 11 | GO:0030076: light-harvesting complex | 3.67E-06 |
| 12 | GO:0009517: PSII associated light-harvesting complex II | 5.79E-06 |
| 13 | GO:0009570: chloroplast stroma | 1.91E-05 |
| 14 | GO:0009543: chloroplast thylakoid lumen | 3.66E-05 |
| 15 | GO:0009783: photosystem II antenna complex | 7.75E-05 |
| 16 | GO:0016020: membrane | 9.73E-05 |
| 17 | GO:0030095: chloroplast photosystem II | 1.60E-04 |
| 18 | GO:0030093: chloroplast photosystem I | 1.85E-04 |
| 19 | GO:0042651: thylakoid membrane | 2.52E-04 |
| 20 | GO:0010007: magnesium chelatase complex | 3.11E-04 |
| 21 | GO:0009706: chloroplast inner membrane | 3.43E-04 |
| 22 | GO:0071782: endoplasmic reticulum tubular network | 4.49E-04 |
| 23 | GO:0016021: integral component of membrane | 5.16E-04 |
| 24 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.48E-03 |
| 25 | GO:0031977: thylakoid lumen | 1.52E-03 |
| 26 | GO:0009654: photosystem II oxygen evolving complex | 4.52E-03 |
| 27 | GO:0005871: kinesin complex | 6.10E-03 |
| 28 | GO:0019898: extrinsic component of membrane | 7.49E-03 |
| 29 | GO:0031969: chloroplast membrane | 1.03E-02 |
| 30 | GO:0009707: chloroplast outer membrane | 1.22E-02 |
| 31 | GO:0005789: endoplasmic reticulum membrane | 2.17E-02 |
| 32 | GO:0016607: nuclear speck | 2.47E-02 |
| 33 | GO:0005623: cell | 3.29E-02 |