co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G57220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006182: cGMP biosynthetic process	0.00E+00
2	GO:0072722: response to amitrole	0.00E+00
3	GO:0043269: regulation of ion transport	0.00E+00
4	GO:0015690: aluminum cation transport	0.00E+00
5	GO:0009617: response to bacterium	4.62E-09
6	GO:0010120: camalexin biosynthetic process	6.03E-08
7	GO:0055114: oxidation-reduction process	7.26E-07
8	GO:0000162: tryptophan biosynthetic process	1.37E-06
9	GO:0071456: cellular response to hypoxia	3.37E-06
10	GO:0042742: defense response to bacterium	5.19E-06
11	GO:0010150: leaf senescence	1.26E-05
12	GO:0006032: chitin catabolic process	1.51E-05
13	GO:0000272: polysaccharide catabolic process	1.94E-05
14	GO:0009682: induced systemic resistance	1.94E-05
15	GO:0006468: protein phosphorylation	1.98E-05
16	GO:0009627: systemic acquired resistance	3.49E-05
17	GO:0006979: response to oxidative stress	3.54E-05
18	GO:0009817: defense response to fungus, incompatible interaction	4.74E-05
19	GO:0009407: toxin catabolic process	5.72E-05
20	GO:0050832: defense response to fungus	7.75E-05
21	GO:0016998: cell wall macromolecule catabolic process	8.49E-05
22	GO:0009625: response to insect	1.11E-04
23	GO:0009636: response to toxic substance	1.46E-04
24	GO:0007166: cell surface receptor signaling pathway	1.68E-04
25	GO:0030091: protein repair	2.06E-04
26	GO:0009851: auxin biosynthetic process	2.16E-04
27	GO:0042759: long-chain fatty acid biosynthetic process	2.32E-04
28	GO:0080120: CAAX-box protein maturation	2.32E-04
29	GO:0071586: CAAX-box protein processing	2.32E-04
30	GO:0009623: response to parasitic fungus	2.32E-04
31	GO:0051245: negative regulation of cellular defense response	2.32E-04
32	GO:0010726: positive regulation of hydrogen peroxide metabolic process	2.32E-04
33	GO:0009700: indole phytoalexin biosynthetic process	2.32E-04
34	GO:0010230: alternative respiration	2.32E-04
35	GO:1901183: positive regulation of camalexin biosynthetic process	2.32E-04
36	GO:0010112: regulation of systemic acquired resistance	3.09E-04
37	GO:0052544: defense response by callose deposition in cell wall	4.97E-04
38	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.15E-04
39	GO:0002215: defense response to nematode	5.15E-04
40	GO:0060919: auxin influx	5.15E-04
41	GO:0006952: defense response	6.31E-04
42	GO:0010272: response to silver ion	8.37E-04
43	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	8.37E-04
44	GO:0010498: proteasomal protein catabolic process	8.37E-04
45	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	8.37E-04
46	GO:0009737: response to abscisic acid	1.18E-03
47	GO:0046513: ceramide biosynthetic process	1.19E-03
48	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.19E-03
49	GO:0019438: aromatic compound biosynthetic process	1.19E-03
50	GO:0002239: response to oomycetes	1.19E-03
51	GO:0006612: protein targeting to membrane	1.19E-03
52	GO:0010255: glucose mediated signaling pathway	1.19E-03
53	GO:0009814: defense response, incompatible interaction	1.31E-03
54	GO:0080142: regulation of salicylic acid biosynthetic process	1.59E-03
55	GO:1901141: regulation of lignin biosynthetic process	1.59E-03
56	GO:0010363: regulation of plant-type hypersensitive response	1.59E-03
57	GO:0010600: regulation of auxin biosynthetic process	1.59E-03
58	GO:0010107: potassium ion import	1.59E-03
59	GO:0009723: response to ethylene	1.99E-03
60	GO:0000304: response to singlet oxygen	2.03E-03
61	GO:0009697: salicylic acid biosynthetic process	2.03E-03
62	GO:0009620: response to fungus	2.04E-03
63	GO:0048544: recognition of pollen	2.09E-03
64	GO:0009646: response to absence of light	2.09E-03
65	GO:0080167: response to karrikin	2.22E-03
66	GO:0010200: response to chitin	2.33E-03
67	GO:0002229: defense response to oomycetes	2.40E-03
68	GO:0002238: response to molecule of fungal origin	2.50E-03
69	GO:0009759: indole glucosinolate biosynthetic process	2.50E-03
70	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.50E-03
71	GO:0006561: proline biosynthetic process	2.50E-03
72	GO:0010942: positive regulation of cell death	2.50E-03
73	GO:0010315: auxin efflux	2.50E-03
74	GO:0010252: auxin homeostasis	2.90E-03
75	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.00E-03
76	GO:0009615: response to virus	3.46E-03
77	GO:0009651: response to salt stress	3.49E-03
78	GO:1902074: response to salt	3.54E-03
79	GO:0080027: response to herbivore	3.54E-03
80	GO:1900056: negative regulation of leaf senescence	3.54E-03
81	GO:0009816: defense response to bacterium, incompatible interaction	3.65E-03
82	GO:0009061: anaerobic respiration	4.10E-03
83	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.10E-03
84	GO:0010204: defense response signaling pathway, resistance gene-independent	4.70E-03
85	GO:0043562: cellular response to nitrogen levels	4.70E-03
86	GO:0009808: lignin metabolic process	4.70E-03
87	GO:0009699: phenylpropanoid biosynthetic process	4.70E-03
88	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	4.70E-03
89	GO:0007338: single fertilization	5.32E-03
90	GO:0034765: regulation of ion transmembrane transport	5.32E-03
91	GO:0090333: regulation of stomatal closure	5.32E-03
92	GO:0045087: innate immune response	5.71E-03
93	GO:0046686: response to cadmium ion	5.89E-03
94	GO:0008202: steroid metabolic process	5.97E-03
95	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.97E-03
96	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.65E-03
97	GO:0009688: abscisic acid biosynthetic process	6.65E-03
98	GO:0043069: negative regulation of programmed cell death	6.65E-03
99	GO:0030148: sphingolipid biosynthetic process	7.35E-03
100	GO:0009698: phenylpropanoid metabolic process	7.35E-03
101	GO:0009089: lysine biosynthetic process via diaminopimelate	7.35E-03
102	GO:0051707: response to other organism	7.36E-03
103	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	8.08E-03
104	GO:0071365: cellular response to auxin stimulus	8.08E-03
105	GO:0009414: response to water deprivation	8.08E-03
106	GO:0009718: anthocyanin-containing compound biosynthetic process	8.84E-03
107	GO:0010540: basipetal auxin transport	9.62E-03
108	GO:0006541: glutamine metabolic process	9.62E-03
109	GO:0002237: response to molecule of bacterial origin	9.62E-03
110	GO:0006813: potassium ion transport	9.93E-03
111	GO:0010053: root epidermal cell differentiation	1.04E-02
112	GO:0042343: indole glucosinolate metabolic process	1.04E-02
113	GO:0044550: secondary metabolite biosynthetic process	1.17E-02
114	GO:0005992: trehalose biosynthetic process	1.21E-02
115	GO:0009863: salicylic acid mediated signaling pathway	1.21E-02
116	GO:0080147: root hair cell development	1.21E-02
117	GO:0009626: plant-type hypersensitive response	1.25E-02
118	GO:0098542: defense response to other organism	1.39E-02
119	GO:0048278: vesicle docking	1.39E-02
120	GO:0030433: ubiquitin-dependent ERAD pathway	1.48E-02
121	GO:0016226: iron-sulfur cluster assembly	1.48E-02
122	GO:0071369: cellular response to ethylene stimulus	1.57E-02
123	GO:0010227: floral organ abscission	1.57E-02
124	GO:0006012: galactose metabolic process	1.57E-02
125	GO:0032259: methylation	1.64E-02
126	GO:0010584: pollen exine formation	1.67E-02
127	GO:0042147: retrograde transport, endosome to Golgi	1.77E-02
128	GO:0070417: cellular response to cold	1.77E-02
129	GO:0042631: cellular response to water deprivation	1.87E-02
130	GO:0042391: regulation of membrane potential	1.87E-02
131	GO:0010197: polar nucleus fusion	1.97E-02
132	GO:0008360: regulation of cell shape	1.97E-02
133	GO:0006885: regulation of pH	1.97E-02
134	GO:0061025: membrane fusion	2.07E-02
135	GO:0042752: regulation of circadian rhythm	2.07E-02
136	GO:0006891: intra-Golgi vesicle-mediated transport	2.29E-02
137	GO:0000302: response to reactive oxygen species	2.29E-02
138	GO:0009630: gravitropism	2.40E-02
139	GO:0016032: viral process	2.40E-02
140	GO:0009567: double fertilization forming a zygote and endosperm	2.62E-02
141	GO:0001666: response to hypoxia	2.98E-02
142	GO:0006906: vesicle fusion	3.22E-02
143	GO:0009733: response to auxin	3.26E-02
144	GO:0006950: response to stress	3.34E-02
145	GO:0008219: cell death	3.59E-02
146	GO:0009611: response to wounding	3.64E-02
147	GO:0048767: root hair elongation	3.72E-02
148	GO:0009813: flavonoid biosynthetic process	3.72E-02
149	GO:0010311: lateral root formation	3.72E-02
150	GO:0010043: response to zinc ion	3.98E-02
151	GO:0010119: regulation of stomatal movement	3.98E-02
152	GO:0009867: jasmonic acid mediated signaling pathway	4.25E-02
153	GO:0006099: tricarboxylic acid cycle	4.39E-02
154	GO:0006887: exocytosis	4.81E-02
155	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.85E-02
156	GO:0042542: response to hydrogen peroxide	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
2	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
3	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
4	GO:0008061: chitin binding	1.06E-06
5	GO:0050660: flavin adenine dinucleotide binding	6.08E-06
6	GO:0004364: glutathione transferase activity	7.18E-06
7	GO:0016301: kinase activity	7.68E-06
8	GO:0004049: anthranilate synthase activity	9.11E-06
9	GO:0004568: chitinase activity	1.51E-05
10	GO:0004674: protein serine/threonine kinase activity	3.68E-05
11	GO:0010279: indole-3-acetic acid amido synthetase activity	3.78E-05
12	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	6.26E-05
13	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.23E-04
14	GO:0043295: glutathione binding	1.62E-04
15	GO:0009055: electron carrier activity	2.11E-04
16	GO:2001147: camalexin binding	2.32E-04
17	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.32E-04
18	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.32E-04
19	GO:2001227: quercitrin binding	2.32E-04
20	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.32E-04
21	GO:0033984: indole-3-glycerol-phosphate lyase activity	2.32E-04
22	GO:0030246: carbohydrate binding	2.73E-04
23	GO:0008171: O-methyltransferase activity	4.30E-04
24	GO:0004713: protein tyrosine kinase activity	4.30E-04
25	GO:0050291: sphingosine N-acyltransferase activity	5.15E-04
26	GO:0003958: NADPH-hemoprotein reductase activity	5.15E-04
27	GO:0032934: sterol binding	5.15E-04
28	GO:0045140: inositol phosphoceramide synthase activity	5.15E-04
29	GO:0005506: iron ion binding	6.73E-04
30	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	7.14E-04
31	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.45E-04
32	GO:0004383: guanylate cyclase activity	8.37E-04
33	GO:0016595: glutamate binding	8.37E-04
34	GO:0004324: ferredoxin-NADP+ reductase activity	8.37E-04
35	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	8.37E-04
36	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.19E-03
37	GO:0004540: ribonuclease activity	1.20E-03
38	GO:0005507: copper ion binding	1.22E-03
39	GO:0005524: ATP binding	1.29E-03
40	GO:0004834: tryptophan synthase activity	1.59E-03
41	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.59E-03
42	GO:0010328: auxin influx transmembrane transporter activity	1.59E-03
43	GO:0004031: aldehyde oxidase activity	1.59E-03
44	GO:0050302: indole-3-acetaldehyde oxidase activity	1.59E-03
45	GO:0045431: flavonol synthase activity	2.03E-03
46	GO:0010181: FMN binding	2.09E-03
47	GO:0036402: proteasome-activating ATPase activity	2.50E-03
48	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.50E-03
49	GO:0004656: procollagen-proline 4-dioxygenase activity	3.00E-03
50	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.00E-03
51	GO:0005242: inward rectifier potassium channel activity	3.00E-03
52	GO:0051020: GTPase binding	3.00E-03
53	GO:0008143: poly(A) binding	3.54E-03
54	GO:0030247: polysaccharide binding	4.07E-03
55	GO:0004034: aldose 1-epimerase activity	4.10E-03
56	GO:0004033: aldo-keto reductase (NADP) activity	4.10E-03
57	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.28E-03
58	GO:0019825: oxygen binding	4.56E-03
59	GO:0008142: oxysterol binding	4.70E-03
60	GO:0003843: 1,3-beta-D-glucan synthase activity	4.70E-03
61	GO:0005516: calmodulin binding	5.02E-03
62	GO:0071949: FAD binding	5.32E-03
63	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	5.97E-03
64	GO:0020037: heme binding	6.03E-03
65	GO:0050661: NADP binding	6.50E-03
66	GO:0004022: alcohol dehydrogenase (NAD) activity	8.84E-03
67	GO:0000175: 3'-5'-exoribonuclease activity	8.84E-03
68	GO:0010329: auxin efflux transmembrane transporter activity	8.84E-03
69	GO:0004535: poly(A)-specific ribonuclease activity	9.62E-03
70	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.62E-03
71	GO:0004175: endopeptidase activity	9.62E-03
72	GO:0004867: serine-type endopeptidase inhibitor activity	1.04E-02
73	GO:0017025: TBP-class protein binding	1.04E-02
74	GO:0004497: monooxygenase activity	1.05E-02
75	GO:0051536: iron-sulfur cluster binding	1.21E-02
76	GO:0031418: L-ascorbic acid binding	1.21E-02
77	GO:0008408: 3'-5' exonuclease activity	1.39E-02
78	GO:0016746: transferase activity, transferring acyl groups	1.46E-02
79	GO:0004672: protein kinase activity	1.64E-02
80	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.67E-02
81	GO:0005451: monovalent cation:proton antiporter activity	1.87E-02
82	GO:0030551: cyclic nucleotide binding	1.87E-02
83	GO:0016853: isomerase activity	2.07E-02
84	GO:0015299: solute:proton antiporter activity	2.07E-02
85	GO:0005509: calcium ion binding	2.44E-02
86	GO:0015385: sodium:proton antiporter activity	2.51E-02
87	GO:0008483: transaminase activity	2.74E-02
88	GO:0004683: calmodulin-dependent protein kinase activity	3.34E-02
89	GO:0008168: methyltransferase activity	3.65E-02
90	GO:0015238: drug transmembrane transporter activity	3.72E-02
91	GO:0004222: metalloendopeptidase activity	3.85E-02
92	GO:0030145: manganese ion binding	3.98E-02
93	GO:0050897: cobalt ion binding	3.98E-02
94	GO:0016491: oxidoreductase activity	4.11E-02
95	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.25E-02
96	GO:0003746: translation elongation factor activity	4.25E-02
97	GO:0000149: SNARE binding	4.53E-02
98	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.53E-02
99	GO:0008233: peptidase activity	4.61E-02
100	GO:0051539: 4 iron, 4 sulfur cluster binding	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.45E-08
2	GO:0005829: cytosol	4.18E-06
3	GO:0016021: integral component of membrane	2.26E-05
4	GO:0005783: endoplasmic reticulum	1.61E-04
5	GO:0030014: CCR4-NOT complex	2.32E-04
6	GO:0045252: oxoglutarate dehydrogenase complex	2.32E-04
7	GO:0005950: anthranilate synthase complex	5.15E-04
8	GO:0005901: caveola	5.15E-04
9	GO:0005853: eukaryotic translation elongation factor 1 complex	8.37E-04
10	GO:0031597: cytosolic proteasome complex	3.00E-03
11	GO:0031595: nuclear proteasome complex	3.54E-03
12	GO:0000148: 1,3-beta-D-glucan synthase complex	4.70E-03
13	GO:0005618: cell wall	5.18E-03
14	GO:0000325: plant-type vacuole	5.21E-03
15	GO:0010494: cytoplasmic stress granule	5.32E-03
16	GO:0008540: proteasome regulatory particle, base subcomplex	5.97E-03
17	GO:0016020: membrane	9.61E-03
18	GO:0005773: vacuole	1.02E-02
19	GO:0030176: integral component of endoplasmic reticulum membrane	1.04E-02
20	GO:0048046: apoplast	1.15E-02
21	GO:0012505: endomembrane system	1.38E-02
22	GO:0005576: extracellular region	1.69E-02
23	GO:0009504: cell plate	2.18E-02
24	GO:0005774: vacuolar membrane	2.72E-02
25	GO:0046658: anchored component of plasma membrane	3.25E-02
26	GO:0009505: plant-type cell wall	3.82E-02
27	GO:0031201: SNARE complex	4.81E-02