GO Enrichment Analysis of Co-expressed Genes with
AT5G56630
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098755: maintenance of seed dormancy by absisic acid | 0.00E+00 |
| 2 | GO:0045053: protein retention in Golgi apparatus | 0.00E+00 |
| 3 | GO:0009933: meristem structural organization | 1.39E-05 |
| 4 | GO:0035266: meristem growth | 1.48E-05 |
| 5 | GO:0007292: female gamete generation | 1.48E-05 |
| 6 | GO:0046686: response to cadmium ion | 1.62E-05 |
| 7 | GO:0051788: response to misfolded protein | 3.88E-05 |
| 8 | GO:0060968: regulation of gene silencing | 6.95E-05 |
| 9 | GO:0006624: vacuolar protein processing | 1.05E-04 |
| 10 | GO:0048194: Golgi vesicle budding | 1.05E-04 |
| 11 | GO:0033320: UDP-D-xylose biosynthetic process | 1.45E-04 |
| 12 | GO:0098719: sodium ion import across plasma membrane | 1.88E-04 |
| 13 | GO:0006014: D-ribose metabolic process | 2.34E-04 |
| 14 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 2.34E-04 |
| 15 | GO:0048827: phyllome development | 2.34E-04 |
| 16 | GO:0048232: male gamete generation | 2.34E-04 |
| 17 | GO:0043248: proteasome assembly | 2.34E-04 |
| 18 | GO:0042732: D-xylose metabolic process | 2.34E-04 |
| 19 | GO:0010358: leaf shaping | 2.34E-04 |
| 20 | GO:0010016: shoot system morphogenesis | 2.82E-04 |
| 21 | GO:0009094: L-phenylalanine biosynthetic process | 2.82E-04 |
| 22 | GO:0046470: phosphatidylcholine metabolic process | 3.32E-04 |
| 23 | GO:0048367: shoot system development | 3.54E-04 |
| 24 | GO:0010078: maintenance of root meristem identity | 3.84E-04 |
| 25 | GO:0009051: pentose-phosphate shunt, oxidative branch | 4.93E-04 |
| 26 | GO:0048507: meristem development | 4.93E-04 |
| 27 | GO:0051453: regulation of intracellular pH | 5.49E-04 |
| 28 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 5.49E-04 |
| 29 | GO:0009845: seed germination | 5.52E-04 |
| 30 | GO:0009688: abscisic acid biosynthetic process | 6.08E-04 |
| 31 | GO:0048829: root cap development | 6.08E-04 |
| 32 | GO:0018119: peptidyl-cysteine S-nitrosylation | 6.67E-04 |
| 33 | GO:0010015: root morphogenesis | 6.67E-04 |
| 34 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 7.29E-04 |
| 35 | GO:0006006: glucose metabolic process | 7.91E-04 |
| 36 | GO:0090351: seedling development | 9.19E-04 |
| 37 | GO:0009225: nucleotide-sugar metabolic process | 9.19E-04 |
| 38 | GO:0007030: Golgi organization | 9.19E-04 |
| 39 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.26E-03 |
| 40 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.49E-03 |
| 41 | GO:0006814: sodium ion transport | 1.73E-03 |
| 42 | GO:0019252: starch biosynthetic process | 1.81E-03 |
| 43 | GO:0009851: auxin biosynthetic process | 1.81E-03 |
| 44 | GO:0006635: fatty acid beta-oxidation | 1.89E-03 |
| 45 | GO:0048364: root development | 1.97E-03 |
| 46 | GO:0071805: potassium ion transmembrane transport | 2.24E-03 |
| 47 | GO:0009873: ethylene-activated signaling pathway | 2.42E-03 |
| 48 | GO:0009793: embryo development ending in seed dormancy | 2.49E-03 |
| 49 | GO:0010029: regulation of seed germination | 2.52E-03 |
| 50 | GO:0016049: cell growth | 2.80E-03 |
| 51 | GO:0010311: lateral root formation | 3.00E-03 |
| 52 | GO:0006499: N-terminal protein myristoylation | 3.09E-03 |
| 53 | GO:0010119: regulation of stomatal movement | 3.20E-03 |
| 54 | GO:0045087: innate immune response | 3.40E-03 |
| 55 | GO:0016051: carbohydrate biosynthetic process | 3.40E-03 |
| 56 | GO:0006631: fatty acid metabolic process | 3.82E-03 |
| 57 | GO:0009965: leaf morphogenesis | 4.37E-03 |
| 58 | GO:0009809: lignin biosynthetic process | 4.95E-03 |
| 59 | GO:0051603: proteolysis involved in cellular protein catabolic process | 5.07E-03 |
| 60 | GO:0055114: oxidation-reduction process | 5.17E-03 |
| 61 | GO:0009626: plant-type hypersensitive response | 5.80E-03 |
| 62 | GO:0018105: peptidyl-serine phosphorylation | 6.44E-03 |
| 63 | GO:0042744: hydrogen peroxide catabolic process | 8.07E-03 |
| 64 | GO:0006633: fatty acid biosynthetic process | 8.64E-03 |
| 65 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 9.99E-03 |
| 66 | GO:0046777: protein autophosphorylation | 1.53E-02 |
| 67 | GO:0006886: intracellular protein transport | 1.70E-02 |
| 68 | GO:0016042: lipid catabolic process | 1.89E-02 |
| 69 | GO:0009408: response to heat | 1.93E-02 |
| 70 | GO:0006397: mRNA processing | 1.99E-02 |
| 71 | GO:0009738: abscisic acid-activated signaling pathway | 2.83E-02 |
| 72 | GO:0035556: intracellular signal transduction | 3.01E-02 |
| 73 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.61E-02 |
| 74 | GO:0042742: defense response to bacterium | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010293: abscisic aldehyde oxidase activity | 0.00E+00 |
| 2 | GO:0016508: long-chain-enoyl-CoA hydratase activity | 0.00E+00 |
| 3 | GO:0005548: phospholipid transporter activity | 0.00E+00 |
| 4 | GO:0004012: phospholipid-translocating ATPase activity | 1.43E-06 |
| 5 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.19E-05 |
| 6 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 1.48E-05 |
| 7 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 3.88E-05 |
| 8 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 1.05E-04 |
| 9 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 1.05E-04 |
| 10 | GO:0031176: endo-1,4-beta-xylanase activity | 1.05E-04 |
| 11 | GO:0004300: enoyl-CoA hydratase activity | 1.05E-04 |
| 12 | GO:0004031: aldehyde oxidase activity | 1.45E-04 |
| 13 | GO:0050302: indole-3-acetaldehyde oxidase activity | 1.45E-04 |
| 14 | GO:0047769: arogenate dehydratase activity | 1.45E-04 |
| 15 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.45E-04 |
| 16 | GO:0004664: prephenate dehydratase activity | 1.45E-04 |
| 17 | GO:0005546: phosphatidylinositol-4,5-bisphosphate binding | 1.88E-04 |
| 18 | GO:0036402: proteasome-activating ATPase activity | 2.34E-04 |
| 19 | GO:0048040: UDP-glucuronate decarboxylase activity | 2.34E-04 |
| 20 | GO:0070403: NAD+ binding | 2.82E-04 |
| 21 | GO:0004747: ribokinase activity | 2.82E-04 |
| 22 | GO:0004620: phospholipase activity | 3.32E-04 |
| 23 | GO:0052747: sinapyl alcohol dehydrogenase activity | 3.84E-04 |
| 24 | GO:0008865: fructokinase activity | 3.84E-04 |
| 25 | GO:0004630: phospholipase D activity | 4.37E-04 |
| 26 | GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity | 4.37E-04 |
| 27 | GO:0015386: potassium:proton antiporter activity | 6.67E-04 |
| 28 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 7.29E-04 |
| 29 | GO:0017025: TBP-class protein binding | 9.19E-04 |
| 30 | GO:0000287: magnesium ion binding | 1.04E-03 |
| 31 | GO:0050660: flavin adenine dinucleotide binding | 1.21E-03 |
| 32 | GO:0004197: cysteine-type endopeptidase activity | 1.98E-03 |
| 33 | GO:0015385: sodium:proton antiporter activity | 2.07E-03 |
| 34 | GO:0016597: amino acid binding | 2.33E-03 |
| 35 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.61E-03 |
| 36 | GO:0004683: calmodulin-dependent protein kinase activity | 2.70E-03 |
| 37 | GO:0005096: GTPase activator activity | 3.00E-03 |
| 38 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.20E-03 |
| 39 | GO:0050661: NADP binding | 3.71E-03 |
| 40 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.26E-03 |
| 41 | GO:0005516: calmodulin binding | 4.96E-03 |
| 42 | GO:0031625: ubiquitin protein ligase binding | 5.31E-03 |
| 43 | GO:0008026: ATP-dependent helicase activity | 6.57E-03 |
| 44 | GO:0016491: oxidoreductase activity | 8.77E-03 |
| 45 | GO:0005524: ATP binding | 9.57E-03 |
| 46 | GO:0003924: GTPase activity | 1.93E-02 |
| 47 | GO:0009055: electron carrier activity | 2.02E-02 |
| 48 | GO:0016887: ATPase activity | 2.63E-02 |
| 49 | GO:0043565: sequence-specific DNA binding | 3.42E-02 |
| 50 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.54E-02 |
| 51 | GO:0005525: GTP binding | 4.14E-02 |
| 52 | GO:0005509: calcium ion binding | 4.53E-02 |
| 53 | GO:0005506: iron ion binding | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005782: peroxisomal matrix | 6.95E-05 |
| 2 | GO:0031597: cytosolic proteasome complex | 2.82E-04 |
| 3 | GO:0031595: nuclear proteasome complex | 3.32E-04 |
| 4 | GO:0005829: cytosol | 3.64E-04 |
| 5 | GO:0009514: glyoxysome | 4.37E-04 |
| 6 | GO:0008540: proteasome regulatory particle, base subcomplex | 5.49E-04 |
| 7 | GO:0017119: Golgi transport complex | 6.08E-04 |
| 8 | GO:0005768: endosome | 7.72E-04 |
| 9 | GO:0030136: clathrin-coated vesicle | 1.49E-03 |
| 10 | GO:0032580: Golgi cisterna membrane | 2.15E-03 |
| 11 | GO:0005777: peroxisome | 3.79E-03 |
| 12 | GO:0031902: late endosome membrane | 3.82E-03 |
| 13 | GO:0031966: mitochondrial membrane | 4.71E-03 |
| 14 | GO:0000502: proteasome complex | 4.95E-03 |
| 15 | GO:0005802: trans-Golgi network | 5.27E-03 |
| 16 | GO:0010008: endosome membrane | 5.68E-03 |
| 17 | GO:0005789: endoplasmic reticulum membrane | 1.02E-02 |
| 18 | GO:0005737: cytoplasm | 1.09E-02 |
| 19 | GO:0009506: plasmodesma | 2.27E-02 |
| 20 | GO:0005794: Golgi apparatus | 3.32E-02 |
| 21 | GO:0005773: vacuole | 3.55E-02 |