Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G56360

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000478: endonucleolytic cleavage involved in rRNA processing0.00E+00
2GO:0080056: petal vascular tissue pattern formation0.00E+00
3GO:0080057: sepal vascular tissue pattern formation0.00E+00
4GO:0030010: establishment of cell polarity1.18E-05
5GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway4.83E-05
6GO:0042273: ribosomal large subunit biogenesis4.83E-05
7GO:0006364: rRNA processing5.71E-05
8GO:0005513: detection of calcium ion6.40E-05
9GO:0009612: response to mechanical stimulus9.94E-05
10GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)9.94E-05
11GO:0007389: pattern specification process1.60E-04
12GO:0009880: embryonic pattern specification1.60E-04
13GO:0042761: very long-chain fatty acid biosynthetic process2.05E-04
14GO:0048829: root cap development2.29E-04
15GO:0010588: cotyledon vascular tissue pattern formation3.02E-04
16GO:0061077: chaperone-mediated protein folding4.63E-04
17GO:0048364: root development4.67E-04
18GO:0009734: auxin-activated signaling pathway6.23E-04
19GO:0010305: leaf vascular tissue pattern formation6.38E-04
20GO:0016126: sterol biosynthetic process9.24E-04
21GO:0048527: lateral root development1.20E-03
22GO:0009736: cytokinin-activated signaling pathway1.83E-03
23GO:0006417: regulation of translation1.96E-03
24GO:0048367: shoot system development2.10E-03
25GO:0018105: peptidyl-serine phosphorylation2.37E-03
26GO:0009790: embryo development3.00E-03
27GO:0006413: translational initiation3.20E-03
28GO:0009826: unidimensional cell growth4.40E-03
29GO:0042254: ribosome biogenesis4.58E-03
30GO:0048366: leaf development5.05E-03
31GO:0046777: protein autophosphorylation5.48E-03
32GO:0006397: mRNA processing7.06E-03
33GO:0009735: response to cytokinin9.61E-03
34GO:0009738: abscisic acid-activated signaling pathway1.00E-02
35GO:0035556: intracellular signal transduction1.06E-02
36GO:0051301: cell division1.09E-02
37GO:0030154: cell differentiation1.79E-02
38GO:0009733: response to auxin1.83E-02
39GO:0007165: signal transduction2.85E-02
40GO:0009793: embryo development ending in seed dormancy3.07E-02
41GO:0016310: phosphorylation3.20E-02
42GO:0006508: proteolysis3.76E-02
RankGO TermAdjusted P value
1GO:0004631: phosphomevalonate kinase activity0.00E+00
2GO:0070181: small ribosomal subunit rRNA binding2.19E-05
3GO:0035198: miRNA binding3.41E-05
4GO:0008143: poly(A) binding1.19E-04
5GO:0043022: ribosome binding1.39E-04
6GO:0003723: RNA binding2.11E-04
7GO:0005528: FK506 binding4.07E-04
8GO:0009931: calcium-dependent protein serine/threonine kinase activity9.92E-04
9GO:0004683: calmodulin-dependent protein kinase activity1.03E-03
10GO:0005509: calcium ion binding1.40E-03
11GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.67E-03
12GO:0003729: mRNA binding2.24E-03
13GO:0008026: ATP-dependent helicase activity2.41E-03
14GO:0003743: translation initiation factor activity3.73E-03
15GO:0003924: GTPase activity6.85E-03
16GO:0005524: ATP binding7.97E-03
17GO:0005516: calmodulin binding1.37E-02
18GO:0016491: oxidoreductase activity2.05E-02
19GO:0004672: protein kinase activity2.22E-02
20GO:0003676: nucleic acid binding4.63E-02
21GO:0005515: protein binding4.78E-02
RankGO TermAdjusted P value
1GO:0005850: eukaryotic translation initiation factor 2 complex0.00E+00
2GO:0043614: multi-eIF complex4.26E-06
3GO:0005851: eukaryotic translation initiation factor 2B complex8.11E-05
4GO:0033290: eukaryotic 48S preinitiation complex9.94E-05
5GO:0030687: preribosome, large subunit precursor1.19E-04
6GO:0034399: nuclear periphery1.39E-04
7GO:0010494: cytoplasmic stress granule1.83E-04
8GO:0005730: nucleolus2.41E-04
9GO:0032040: small-subunit processome2.77E-04
10GO:0005777: peroxisome1.13E-02
11GO:0005840: ribosome1.74E-02
12GO:0005634: nucleus2.10E-02
13GO:0005829: cytosol2.15E-02
14GO:0005737: cytoplasm2.28E-02
15GO:0005789: endoplasmic reticulum membrane2.28E-02
Gene type



Gene DE type