GO Enrichment Analysis of Co-expressed Genes with
AT5G56180
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010219: regulation of vernalization response | 0.00E+00 |
| 2 | GO:0046459: short-chain fatty acid metabolic process | 0.00E+00 |
| 3 | GO:0042906: xanthine transport | 0.00E+00 |
| 4 | GO:0044249: cellular biosynthetic process | 0.00E+00 |
| 5 | GO:0010730: negative regulation of hydrogen peroxide biosynthetic process | 0.00E+00 |
| 6 | GO:0070291: N-acylethanolamine metabolic process | 0.00E+00 |
| 7 | GO:0005997: xylulose metabolic process | 0.00E+00 |
| 8 | GO:0009415: response to water | 1.72E-06 |
| 9 | GO:0006624: vacuolar protein processing | 1.11E-05 |
| 10 | GO:0009737: response to abscisic acid | 7.85E-05 |
| 11 | GO:0051603: proteolysis involved in cellular protein catabolic process | 8.77E-05 |
| 12 | GO:0098869: cellular oxidant detoxification | 9.33E-05 |
| 13 | GO:0006635: fatty acid beta-oxidation | 1.17E-04 |
| 14 | GO:1903409: reactive oxygen species biosynthetic process | 1.62E-04 |
| 15 | GO:0006369: termination of RNA polymerase II transcription | 1.62E-04 |
| 16 | GO:0046167: glycerol-3-phosphate biosynthetic process | 1.62E-04 |
| 17 | GO:0006811: ion transport | 3.26E-04 |
| 18 | GO:0030003: cellular cation homeostasis | 3.69E-04 |
| 19 | GO:0015857: uracil transport | 3.69E-04 |
| 20 | GO:0015720: allantoin transport | 3.69E-04 |
| 21 | GO:0048833: specification of floral organ number | 3.69E-04 |
| 22 | GO:0006641: triglyceride metabolic process | 3.69E-04 |
| 23 | GO:0010468: regulation of gene expression | 5.04E-04 |
| 24 | GO:0046786: viral replication complex formation and maintenance | 6.04E-04 |
| 25 | GO:0071705: nitrogen compound transport | 6.04E-04 |
| 26 | GO:0042344: indole glucosinolate catabolic process | 6.04E-04 |
| 27 | GO:0019563: glycerol catabolic process | 6.04E-04 |
| 28 | GO:0009269: response to desiccation | 7.44E-04 |
| 29 | GO:0006072: glycerol-3-phosphate metabolic process | 8.63E-04 |
| 30 | GO:0015749: monosaccharide transport | 8.63E-04 |
| 31 | GO:1901332: negative regulation of lateral root development | 8.63E-04 |
| 32 | GO:0006882: cellular zinc ion homeostasis | 8.63E-04 |
| 33 | GO:0042742: defense response to bacterium | 9.00E-04 |
| 34 | GO:0035556: intracellular signal transduction | 1.11E-03 |
| 35 | GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain | 1.14E-03 |
| 36 | GO:0010600: regulation of auxin biosynthetic process | 1.14E-03 |
| 37 | GO:0010188: response to microbial phytotoxin | 1.14E-03 |
| 38 | GO:0006878: cellular copper ion homeostasis | 1.14E-03 |
| 39 | GO:0006646: phosphatidylethanolamine biosynthetic process | 1.14E-03 |
| 40 | GO:0048442: sepal development | 1.14E-03 |
| 41 | GO:0043097: pyrimidine nucleoside salvage | 1.45E-03 |
| 42 | GO:0009409: response to cold | 1.63E-03 |
| 43 | GO:0006206: pyrimidine nucleobase metabolic process | 1.78E-03 |
| 44 | GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation | 1.78E-03 |
| 45 | GO:0042732: D-xylose metabolic process | 1.78E-03 |
| 46 | GO:0010286: heat acclimation | 1.88E-03 |
| 47 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 2.14E-03 |
| 48 | GO:0031930: mitochondria-nucleus signaling pathway | 2.14E-03 |
| 49 | GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity | 2.14E-03 |
| 50 | GO:0045926: negative regulation of growth | 2.14E-03 |
| 51 | GO:0006694: steroid biosynthetic process | 2.14E-03 |
| 52 | GO:0019509: L-methionine salvage from methylthioadenosine | 2.14E-03 |
| 53 | GO:0010044: response to aluminum ion | 2.52E-03 |
| 54 | GO:0009817: defense response to fungus, incompatible interaction | 2.74E-03 |
| 55 | GO:0010928: regulation of auxin mediated signaling pathway | 2.91E-03 |
| 56 | GO:0009819: drought recovery | 2.91E-03 |
| 57 | GO:0009617: response to bacterium | 3.03E-03 |
| 58 | GO:0009631: cold acclimation | 3.16E-03 |
| 59 | GO:0006098: pentose-phosphate shunt | 3.77E-03 |
| 60 | GO:0046916: cellular transition metal ion homeostasis | 3.77E-03 |
| 61 | GO:0007165: signal transduction | 3.82E-03 |
| 62 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 4.22E-03 |
| 63 | GO:0008202: steroid metabolic process | 4.22E-03 |
| 64 | GO:0042542: response to hydrogen peroxide | 4.27E-03 |
| 65 | GO:0006970: response to osmotic stress | 4.63E-03 |
| 66 | GO:0009970: cellular response to sulfate starvation | 4.69E-03 |
| 67 | GO:0006995: cellular response to nitrogen starvation | 4.69E-03 |
| 68 | GO:0048441: petal development | 4.69E-03 |
| 69 | GO:0007064: mitotic sister chromatid cohesion | 4.69E-03 |
| 70 | GO:0006535: cysteine biosynthetic process from serine | 4.69E-03 |
| 71 | GO:0009688: abscisic acid biosynthetic process | 4.69E-03 |
| 72 | GO:0009641: shade avoidance | 4.69E-03 |
| 73 | GO:0006816: calcium ion transport | 5.19E-03 |
| 74 | GO:0009682: induced systemic resistance | 5.19E-03 |
| 75 | GO:0052544: defense response by callose deposition in cell wall | 5.19E-03 |
| 76 | GO:0000165: MAPK cascade | 5.38E-03 |
| 77 | GO:0048440: carpel development | 6.76E-03 |
| 78 | GO:0002237: response to molecule of bacterial origin | 6.76E-03 |
| 79 | GO:0007034: vacuolar transport | 6.76E-03 |
| 80 | GO:0010167: response to nitrate | 7.32E-03 |
| 81 | GO:0071732: cellular response to nitric oxide | 7.32E-03 |
| 82 | GO:0006468: protein phosphorylation | 7.43E-03 |
| 83 | GO:0045333: cellular respiration | 8.48E-03 |
| 84 | GO:0019344: cysteine biosynthetic process | 8.48E-03 |
| 85 | GO:0016575: histone deacetylation | 9.09E-03 |
| 86 | GO:0006874: cellular calcium ion homeostasis | 9.09E-03 |
| 87 | GO:0009695: jasmonic acid biosynthetic process | 9.09E-03 |
| 88 | GO:0009693: ethylene biosynthetic process | 1.10E-02 |
| 89 | GO:0071215: cellular response to abscisic acid stimulus | 1.10E-02 |
| 90 | GO:0071369: cellular response to ethylene stimulus | 1.10E-02 |
| 91 | GO:0048443: stamen development | 1.17E-02 |
| 92 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.24E-02 |
| 93 | GO:0009414: response to water deprivation | 1.25E-02 |
| 94 | GO:0000226: microtubule cytoskeleton organization | 1.31E-02 |
| 95 | GO:0080022: primary root development | 1.31E-02 |
| 96 | GO:0010051: xylem and phloem pattern formation | 1.31E-02 |
| 97 | GO:0015991: ATP hydrolysis coupled proton transport | 1.31E-02 |
| 98 | GO:0042631: cellular response to water deprivation | 1.31E-02 |
| 99 | GO:0006979: response to oxidative stress | 1.31E-02 |
| 100 | GO:0046323: glucose import | 1.38E-02 |
| 101 | GO:0006814: sodium ion transport | 1.45E-02 |
| 102 | GO:0009749: response to glucose | 1.52E-02 |
| 103 | GO:0008654: phospholipid biosynthetic process | 1.52E-02 |
| 104 | GO:0009851: auxin biosynthetic process | 1.52E-02 |
| 105 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.60E-02 |
| 106 | GO:0016310: phosphorylation | 1.65E-02 |
| 107 | GO:0071281: cellular response to iron ion | 1.75E-02 |
| 108 | GO:0009738: abscisic acid-activated signaling pathway | 1.80E-02 |
| 109 | GO:0019760: glucosinolate metabolic process | 1.83E-02 |
| 110 | GO:0009567: double fertilization forming a zygote and endosperm | 1.83E-02 |
| 111 | GO:0055114: oxidation-reduction process | 1.92E-02 |
| 112 | GO:0009611: response to wounding | 1.93E-02 |
| 113 | GO:0016126: sterol biosynthetic process | 2.07E-02 |
| 114 | GO:0010029: regulation of seed germination | 2.16E-02 |
| 115 | GO:0048573: photoperiodism, flowering | 2.33E-02 |
| 116 | GO:0006950: response to stress | 2.33E-02 |
| 117 | GO:0005975: carbohydrate metabolic process | 2.41E-02 |
| 118 | GO:0010043: response to zinc ion | 2.78E-02 |
| 119 | GO:0009651: response to salt stress | 2.80E-02 |
| 120 | GO:0045087: innate immune response | 2.97E-02 |
| 121 | GO:0016051: carbohydrate biosynthetic process | 2.97E-02 |
| 122 | GO:0016192: vesicle-mediated transport | 2.99E-02 |
| 123 | GO:0006099: tricarboxylic acid cycle | 3.06E-02 |
| 124 | GO:0030001: metal ion transport | 3.26E-02 |
| 125 | GO:0009640: photomorphogenesis | 3.55E-02 |
| 126 | GO:0031347: regulation of defense response | 4.07E-02 |
| 127 | GO:0009751: response to salicylic acid | 4.12E-02 |
| 128 | GO:0009585: red, far-red light phototransduction | 4.39E-02 |
| 129 | GO:0006813: potassium ion transport | 4.39E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047787: delta4-3-oxosteroid 5beta-reductase activity | 0.00E+00 |
| 2 | GO:0009045: xylose isomerase activity | 0.00E+00 |
| 3 | GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity | 0.00E+00 |
| 4 | GO:0010293: abscisic aldehyde oxidase activity | 0.00E+00 |
| 5 | GO:0103073: anandamide amidohydrolase activity | 0.00E+00 |
| 6 | GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity | 0.00E+00 |
| 7 | GO:0102077: oleamide hydrolase activity | 0.00E+00 |
| 8 | GO:0005358: high-affinity hydrogen:glucose symporter activity | 0.00E+00 |
| 9 | GO:0004370: glycerol kinase activity | 0.00E+00 |
| 10 | GO:0047412: N-(long-chain-acyl)ethanolamine deacylase activity | 0.00E+00 |
| 11 | GO:0005272: sodium channel activity | 0.00E+00 |
| 12 | GO:0042907: xanthine transmembrane transporter activity | 0.00E+00 |
| 13 | GO:0004197: cysteine-type endopeptidase activity | 1.29E-04 |
| 14 | GO:0001530: lipopolysaccharide binding | 1.62E-04 |
| 15 | GO:0046870: cadmium ion binding | 1.62E-04 |
| 16 | GO:0004112: cyclic-nucleotide phosphodiesterase activity | 1.62E-04 |
| 17 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.62E-04 |
| 18 | GO:0004856: xylulokinase activity | 1.62E-04 |
| 19 | GO:0009679: hexose:proton symporter activity | 1.62E-04 |
| 20 | GO:0035671: enone reductase activity | 1.62E-04 |
| 21 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 1.62E-04 |
| 22 | GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity | 3.69E-04 |
| 23 | GO:0019200: carbohydrate kinase activity | 3.69E-04 |
| 24 | GO:0032791: lead ion binding | 3.69E-04 |
| 25 | GO:0005274: allantoin uptake transmembrane transporter activity | 3.69E-04 |
| 26 | GO:0004609: phosphatidylserine decarboxylase activity | 3.69E-04 |
| 27 | GO:0047216: inositol 3-alpha-galactosyltransferase activity | 3.69E-04 |
| 28 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 3.69E-04 |
| 29 | GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 6.04E-04 |
| 30 | GO:0004383: guanylate cyclase activity | 6.04E-04 |
| 31 | GO:0004096: catalase activity | 6.04E-04 |
| 32 | GO:0004707: MAP kinase activity | 7.44E-04 |
| 33 | GO:0001653: peptide receptor activity | 8.63E-04 |
| 34 | GO:0004108: citrate (Si)-synthase activity | 8.63E-04 |
| 35 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 8.63E-04 |
| 36 | GO:0004300: enoyl-CoA hydratase activity | 8.63E-04 |
| 37 | GO:0015210: uracil transmembrane transporter activity | 1.14E-03 |
| 38 | GO:0003995: acyl-CoA dehydrogenase activity | 1.14E-03 |
| 39 | GO:0004031: aldehyde oxidase activity | 1.14E-03 |
| 40 | GO:0050302: indole-3-acetaldehyde oxidase activity | 1.14E-03 |
| 41 | GO:0009916: alternative oxidase activity | 1.14E-03 |
| 42 | GO:0015145: monosaccharide transmembrane transporter activity | 1.45E-03 |
| 43 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.45E-03 |
| 44 | GO:0004040: amidase activity | 1.45E-03 |
| 45 | GO:0003997: acyl-CoA oxidase activity | 1.45E-03 |
| 46 | GO:0016301: kinase activity | 1.45E-03 |
| 47 | GO:0000293: ferric-chelate reductase activity | 1.78E-03 |
| 48 | GO:0019137: thioglucosidase activity | 1.78E-03 |
| 49 | GO:0070300: phosphatidic acid binding | 2.14E-03 |
| 50 | GO:0005261: cation channel activity | 2.14E-03 |
| 51 | GO:0004849: uridine kinase activity | 2.14E-03 |
| 52 | GO:0004602: glutathione peroxidase activity | 2.14E-03 |
| 53 | GO:0004124: cysteine synthase activity | 2.14E-03 |
| 54 | GO:0004525: ribonuclease III activity | 2.91E-03 |
| 55 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 3.33E-03 |
| 56 | GO:0001104: RNA polymerase II transcription cofactor activity | 3.33E-03 |
| 57 | GO:0005267: potassium channel activity | 3.33E-03 |
| 58 | GO:0000989: transcription factor activity, transcription factor binding | 3.77E-03 |
| 59 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 3.77E-03 |
| 60 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.22E-03 |
| 61 | GO:0005262: calcium channel activity | 6.22E-03 |
| 62 | GO:0019888: protein phosphatase regulator activity | 6.22E-03 |
| 63 | GO:0004175: endopeptidase activity | 6.76E-03 |
| 64 | GO:0004672: protein kinase activity | 6.79E-03 |
| 65 | GO:0005217: intracellular ligand-gated ion channel activity | 7.32E-03 |
| 66 | GO:0004970: ionotropic glutamate receptor activity | 7.32E-03 |
| 67 | GO:0004674: protein serine/threonine kinase activity | 7.35E-03 |
| 68 | GO:0004407: histone deacetylase activity | 8.48E-03 |
| 69 | GO:0043424: protein histidine kinase binding | 9.09E-03 |
| 70 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.10E-02 |
| 71 | GO:0005509: calcium ion binding | 1.14E-02 |
| 72 | GO:0015144: carbohydrate transmembrane transporter activity | 1.28E-02 |
| 73 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 1.38E-02 |
| 74 | GO:0005351: sugar:proton symporter activity | 1.44E-02 |
| 75 | GO:0016853: isomerase activity | 1.45E-02 |
| 76 | GO:0008237: metallopeptidase activity | 1.91E-02 |
| 77 | GO:0102483: scopolin beta-glucosidase activity | 2.33E-02 |
| 78 | GO:0030247: polysaccharide binding | 2.33E-02 |
| 79 | GO:0005096: GTPase activator activity | 2.60E-02 |
| 80 | GO:0050660: flavin adenine dinucleotide binding | 2.65E-02 |
| 81 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.69E-02 |
| 82 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.78E-02 |
| 83 | GO:0050897: cobalt ion binding | 2.78E-02 |
| 84 | GO:0004497: monooxygenase activity | 2.84E-02 |
| 85 | GO:0008422: beta-glucosidase activity | 3.16E-02 |
| 86 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.76E-02 |
| 87 | GO:0005506: iron ion binding | 4.43E-02 |
| 88 | GO:0005524: ATP binding | 4.62E-02 |
| 89 | GO:0031625: ubiquitin protein ligase binding | 4.72E-02 |
| 90 | GO:0008234: cysteine-type peptidase activity | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000323: lytic vacuole | 1.11E-05 |
| 2 | GO:0016021: integral component of membrane | 1.78E-04 |
| 3 | GO:0005886: plasma membrane | 4.63E-04 |
| 4 | GO:0030658: transport vesicle membrane | 8.63E-04 |
| 5 | GO:0005773: vacuole | 1.06E-03 |
| 6 | GO:0033179: proton-transporting V-type ATPase, V0 domain | 1.14E-03 |
| 7 | GO:0005777: peroxisome | 1.28E-03 |
| 8 | GO:0070847: core mediator complex | 1.78E-03 |
| 9 | GO:0005851: eukaryotic translation initiation factor 2B complex | 1.78E-03 |
| 10 | GO:0000815: ESCRT III complex | 2.14E-03 |
| 11 | GO:0000307: cyclin-dependent protein kinase holoenzyme complex | 3.33E-03 |
| 12 | GO:0009514: glyoxysome | 3.33E-03 |
| 13 | GO:0000159: protein phosphatase type 2A complex | 5.19E-03 |
| 14 | GO:0005764: lysosome | 6.76E-03 |
| 15 | GO:0010008: endosome membrane | 7.31E-03 |
| 16 | GO:0070469: respiratory chain | 9.09E-03 |
| 17 | GO:0005774: vacuolar membrane | 1.03E-02 |
| 18 | GO:0031965: nuclear membrane | 1.52E-02 |
| 19 | GO:0005615: extracellular space | 1.65E-02 |
| 20 | GO:0016592: mediator complex | 1.67E-02 |
| 21 | GO:0005737: cytoplasm | 1.74E-02 |
| 22 | GO:0005789: endoplasmic reticulum membrane | 2.43E-02 |
| 23 | GO:0005783: endoplasmic reticulum | 3.86E-02 |
| 24 | GO:0031966: mitochondrial membrane | 4.18E-02 |