co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G56030

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071731: response to nitric oxide	0.00E+00
2	GO:0006457: protein folding	1.99E-14
3	GO:0006412: translation	3.78E-07
4	GO:0046686: response to cadmium ion	9.08E-07
5	GO:0007005: mitochondrion organization	1.14E-06
6	GO:0009408: response to heat	2.48E-06
7	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.83E-06
8	GO:0019877: diaminopimelate biosynthetic process	3.12E-05
9	GO:0006626: protein targeting to mitochondrion	3.71E-05
10	GO:0034976: response to endoplasmic reticulum stress	5.60E-05
11	GO:0000027: ribosomal large subunit assembly	6.31E-05
12	GO:0045041: protein import into mitochondrial intermembrane space	7.88E-05
13	GO:0080181: lateral root branching	7.88E-05
14	GO:0051258: protein polymerization	7.88E-05
15	GO:1902626: assembly of large subunit precursor of preribosome	1.37E-04
16	GO:0002181: cytoplasmic translation	1.37E-04
17	GO:0015695: organic cation transport	1.37E-04
18	GO:0055074: calcium ion homeostasis	1.37E-04
19	GO:0015696: ammonium transport	2.04E-04
20	GO:0006986: response to unfolded protein	2.04E-04
21	GO:0051085: chaperone mediated protein folding requiring cofactor	2.04E-04
22	GO:0072334: UDP-galactose transmembrane transport	2.04E-04
23	GO:0051131: chaperone-mediated protein complex assembly	2.04E-04
24	GO:0072488: ammonium transmembrane transport	2.76E-04
25	GO:0010311: lateral root formation	3.49E-04
26	GO:0009612: response to mechanical stimulus	5.20E-04
27	GO:0006458: 'de novo' protein folding	5.20E-04
28	GO:0016444: somatic cell DNA recombination	5.20E-04
29	GO:0000911: cytokinesis by cell plate formation	5.20E-04
30	GO:0042026: protein refolding	5.20E-04
31	GO:0030968: endoplasmic reticulum unfolded protein response	7.94E-04
32	GO:0009553: embryo sac development	9.73E-04
33	GO:0009089: lysine biosynthetic process via diaminopimelate	1.20E-03
34	GO:0006820: anion transport	1.31E-03
35	GO:0010075: regulation of meristem growth	1.43E-03
36	GO:0009934: regulation of meristem structural organization	1.55E-03
37	GO:0048467: gynoecium development	1.55E-03
38	GO:0030150: protein import into mitochondrial matrix	1.92E-03
39	GO:0006334: nucleosome assembly	2.19E-03
40	GO:0061077: chaperone-mediated protein folding	2.19E-03
41	GO:0030433: ubiquitin-dependent ERAD pathway	2.32E-03
42	GO:0009306: protein secretion	2.61E-03
43	GO:0042254: ribosome biogenesis	2.64E-03
44	GO:0000413: protein peptidyl-prolyl isomerization	2.90E-03
45	GO:0010197: polar nucleus fusion	3.05E-03
46	GO:0048868: pollen tube development	3.05E-03
47	GO:0080167: response to karrikin	3.20E-03
48	GO:0080156: mitochondrial mRNA modification	3.51E-03
49	GO:0010090: trichome morphogenesis	3.84E-03
50	GO:0009567: double fertilization forming a zygote and endosperm	4.00E-03
51	GO:0009615: response to virus	4.52E-03
52	GO:0006950: response to stress	5.05E-03
53	GO:0016049: cell growth	5.23E-03
54	GO:0006811: ion transport	5.79E-03
55	GO:0048527: lateral root development	5.99E-03
56	GO:0000724: double-strand break repair via homologous recombination	6.18E-03
57	GO:0008283: cell proliferation	7.60E-03
58	GO:0009926: auxin polar transport	7.60E-03
59	GO:0009793: embryo development ending in seed dormancy	8.21E-03
60	GO:0009965: leaf morphogenesis	8.24E-03
61	GO:0006364: rRNA processing	9.36E-03
62	GO:0006486: protein glycosylation	9.36E-03
63	GO:0006414: translational elongation	1.24E-02
64	GO:0009651: response to salt stress	1.32E-02
65	GO:0007623: circadian rhythm	1.77E-02
66	GO:0009451: RNA modification	1.80E-02
67	GO:0009733: response to auxin	1.90E-02
68	GO:0015031: protein transport	2.15E-02
69	GO:0009409: response to cold	2.29E-02
70	GO:0009723: response to ethylene	2.67E-02
71	GO:0045454: cell redox homeostasis	3.19E-02
72	GO:0048364: root development	3.82E-02
73	GO:0009734: auxin-activated signaling pathway	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0051082: unfolded protein binding	5.57E-14
2	GO:0003735: structural constituent of ribosome	5.98E-09
3	GO:0008840: 4-hydroxy-tetrahydrodipicolinate synthase	3.12E-05
4	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	3.12E-05
5	GO:0000030: mannosyltransferase activity	1.37E-04
6	GO:0070181: small ribosomal subunit rRNA binding	1.37E-04
7	GO:0005460: UDP-glucose transmembrane transporter activity	2.04E-04
8	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.32E-04
9	GO:0002020: protease binding	3.53E-04
10	GO:0005459: UDP-galactose transmembrane transporter activity	3.53E-04
11	GO:0003746: translation elongation factor activity	4.20E-04
12	GO:0008519: ammonium transmembrane transporter activity	4.34E-04
13	GO:0015288: porin activity	6.99E-04
14	GO:0008308: voltage-gated anion channel activity	7.94E-04
15	GO:0044183: protein binding involved in protein folding	1.20E-03
16	GO:0019843: rRNA binding	1.24E-03
17	GO:0031072: heat shock protein binding	1.43E-03
18	GO:0015266: protein channel activity	1.43E-03
19	GO:0005507: copper ion binding	1.82E-03
20	GO:0051087: chaperone binding	2.05E-03
21	GO:0003756: protein disulfide isomerase activity	2.61E-03
22	GO:0016853: isomerase activity	3.20E-03
23	GO:0005524: ATP binding	3.50E-03
24	GO:0003729: mRNA binding	4.69E-03
25	GO:0050897: cobalt ion binding	5.99E-03
26	GO:0003697: single-stranded DNA binding	6.38E-03
27	GO:0042393: histone binding	6.98E-03
28	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	8.46E-03
29	GO:0030246: carbohydrate binding	1.12E-02
30	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.43E-02
31	GO:0005509: calcium ion binding	1.56E-02
32	GO:0003682: chromatin binding	2.51E-02
33	GO:0004497: monooxygenase activity	2.81E-02
34	GO:0003924: GTPase activity	3.71E-02
35	GO:0003723: RNA binding	3.79E-02
36	GO:0004519: endonuclease activity	3.93E-02
37	GO:0005515: protein binding	4.43E-02

Rank	GO Term	Adjusted P value
1	GO:0005774: vacuolar membrane	3.13E-13
2	GO:0005783: endoplasmic reticulum	1.18E-12
3	GO:0022626: cytosolic ribosome	1.38E-08
4	GO:0005730: nucleolus	6.45E-08
5	GO:0005788: endoplasmic reticulum lumen	9.04E-08
6	GO:0022625: cytosolic large ribosomal subunit	1.02E-06
7	GO:0009506: plasmodesma	1.85E-06
8	GO:0005840: ribosome	4.46E-06
9	GO:0005773: vacuole	4.90E-06
10	GO:0005742: mitochondrial outer membrane translocase complex	1.17E-05
11	GO:0005829: cytosol	1.30E-04
12	GO:0022627: cytosolic small ribosomal subunit	2.15E-04
13	GO:0030173: integral component of Golgi membrane	5.20E-04
14	GO:0016363: nuclear matrix	5.20E-04
15	GO:0046930: pore complex	7.94E-04
16	GO:0005747: mitochondrial respiratory chain complex I	8.66E-04
17	GO:0005739: mitochondrion	1.01E-03
18	GO:0005886: plasma membrane	1.05E-03
19	GO:0016020: membrane	1.10E-03
20	GO:0005759: mitochondrial matrix	1.54E-03
21	GO:0030176: integral component of endoplasmic reticulum membrane	1.67E-03
22	GO:0005758: mitochondrial intermembrane space	1.92E-03
23	GO:0005741: mitochondrial outer membrane	2.19E-03
24	GO:0048046: apoplast	3.21E-03
25	GO:0005618: cell wall	3.65E-03
26	GO:0016592: mediator complex	3.68E-03
27	GO:0009505: plant-type cell wall	3.77E-03
28	GO:0005743: mitochondrial inner membrane	4.38E-03
29	GO:0009507: chloroplast	5.02E-03
30	GO:0015934: large ribosomal subunit	5.99E-03
31	GO:0005635: nuclear envelope	9.82E-03
32	GO:0005737: cytoplasm	1.37E-02
33	GO:0005789: endoplasmic reticulum membrane	2.59E-02
34	GO:0005794: Golgi apparatus	3.52E-02
35	GO:0043231: intracellular membrane-bounded organelle	3.97E-02
36	GO:0005887: integral component of plasma membrane	4.61E-02