GO Enrichment Analysis of Co-expressed Genes with
AT5G55630
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0033231: carbohydrate export | 0.00E+00 |
| 3 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 4 | GO:0015995: chlorophyll biosynthetic process | 9.31E-10 |
| 5 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.21E-07 |
| 6 | GO:0009735: response to cytokinin | 7.39E-06 |
| 7 | GO:0006783: heme biosynthetic process | 1.39E-05 |
| 8 | GO:0015979: photosynthesis | 2.84E-05 |
| 9 | GO:1902334: fructose export from vacuole to cytoplasm | 3.00E-05 |
| 10 | GO:0015755: fructose transport | 3.00E-05 |
| 11 | GO:0033206: meiotic cytokinesis | 3.00E-05 |
| 12 | GO:0009765: photosynthesis, light harvesting | 2.67E-04 |
| 13 | GO:0000160: phosphorelay signal transduction system | 3.32E-04 |
| 14 | GO:0009823: cytokinin catabolic process | 3.42E-04 |
| 15 | GO:0010218: response to far red light | 3.49E-04 |
| 16 | GO:0042176: regulation of protein catabolic process | 4.20E-04 |
| 17 | GO:0009913: epidermal cell differentiation | 4.20E-04 |
| 18 | GO:2000033: regulation of seed dormancy process | 5.02E-04 |
| 19 | GO:0010114: response to red light | 5.12E-04 |
| 20 | GO:0009769: photosynthesis, light harvesting in photosystem II | 5.88E-04 |
| 21 | GO:0050829: defense response to Gram-negative bacterium | 5.88E-04 |
| 22 | GO:0009645: response to low light intensity stimulus | 5.88E-04 |
| 23 | GO:0019827: stem cell population maintenance | 6.76E-04 |
| 24 | GO:0009642: response to light intensity | 6.76E-04 |
| 25 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 6.76E-04 |
| 26 | GO:0009690: cytokinin metabolic process | 6.76E-04 |
| 27 | GO:0009736: cytokinin-activated signaling pathway | 6.82E-04 |
| 28 | GO:0009657: plastid organization | 7.68E-04 |
| 29 | GO:0006779: porphyrin-containing compound biosynthetic process | 9.61E-04 |
| 30 | GO:0045036: protein targeting to chloroplast | 1.06E-03 |
| 31 | GO:0006949: syncytium formation | 1.06E-03 |
| 32 | GO:0006995: cellular response to nitrogen starvation | 1.06E-03 |
| 33 | GO:0043085: positive regulation of catalytic activity | 1.16E-03 |
| 34 | GO:0009750: response to fructose | 1.16E-03 |
| 35 | GO:0045490: pectin catabolic process | 1.61E-03 |
| 36 | GO:0009863: salicylic acid mediated signaling pathway | 1.86E-03 |
| 37 | GO:0010187: negative regulation of seed germination | 1.86E-03 |
| 38 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.86E-03 |
| 39 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.98E-03 |
| 40 | GO:0051260: protein homooligomerization | 2.11E-03 |
| 41 | GO:0009269: response to desiccation | 2.11E-03 |
| 42 | GO:0016998: cell wall macromolecule catabolic process | 2.11E-03 |
| 43 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.38E-03 |
| 44 | GO:0070417: cellular response to cold | 2.66E-03 |
| 45 | GO:0009741: response to brassinosteroid | 2.94E-03 |
| 46 | GO:0006662: glycerol ether metabolic process | 2.94E-03 |
| 47 | GO:0009646: response to absence of light | 3.09E-03 |
| 48 | GO:0048825: cotyledon development | 3.24E-03 |
| 49 | GO:0010193: response to ozone | 3.40E-03 |
| 50 | GO:0009828: plant-type cell wall loosening | 3.87E-03 |
| 51 | GO:0009409: response to cold | 3.90E-03 |
| 52 | GO:0010029: regulation of seed germination | 4.53E-03 |
| 53 | GO:0010411: xyloglucan metabolic process | 4.88E-03 |
| 54 | GO:0018298: protein-chromophore linkage | 5.23E-03 |
| 55 | GO:0007568: aging | 5.78E-03 |
| 56 | GO:0009637: response to blue light | 6.16E-03 |
| 57 | GO:0009867: jasmonic acid mediated signaling pathway | 6.16E-03 |
| 58 | GO:0034599: cellular response to oxidative stress | 6.35E-03 |
| 59 | GO:0009640: photomorphogenesis | 7.34E-03 |
| 60 | GO:0042546: cell wall biogenesis | 7.54E-03 |
| 61 | GO:0009644: response to high light intensity | 7.75E-03 |
| 62 | GO:0009664: plant-type cell wall organization | 8.60E-03 |
| 63 | GO:0042538: hyperosmotic salinity response | 8.60E-03 |
| 64 | GO:0010224: response to UV-B | 9.25E-03 |
| 65 | GO:0006417: regulation of translation | 9.70E-03 |
| 66 | GO:0009740: gibberellic acid mediated signaling pathway | 1.11E-02 |
| 67 | GO:0042545: cell wall modification | 1.13E-02 |
| 68 | GO:0009624: response to nematode | 1.16E-02 |
| 69 | GO:0006396: RNA processing | 1.18E-02 |
| 70 | GO:0009845: seed germination | 1.43E-02 |
| 71 | GO:0007623: circadian rhythm | 1.70E-02 |
| 72 | GO:0009733: response to auxin | 1.81E-02 |
| 73 | GO:0009826: unidimensional cell growth | 2.26E-02 |
| 74 | GO:0006355: regulation of transcription, DNA-templated | 2.26E-02 |
| 75 | GO:0055114: oxidation-reduction process | 2.50E-02 |
| 76 | GO:0009723: response to ethylene | 2.58E-02 |
| 77 | GO:0006351: transcription, DNA-templated | 2.62E-02 |
| 78 | GO:0010200: response to chitin | 2.78E-02 |
| 79 | GO:0045454: cell redox homeostasis | 3.08E-02 |
| 80 | GO:0007275: multicellular organism development | 3.17E-02 |
| 81 | GO:0016042: lipid catabolic process | 3.50E-02 |
| 82 | GO:0006397: mRNA processing | 3.69E-02 |
| 83 | GO:0009873: ethylene-activated signaling pathway | 4.29E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015284: fructose uniporter activity | 0.00E+00 |
| 2 | GO:0004853: uroporphyrinogen decarboxylase activity | 0.00E+00 |
| 3 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 3.00E-05 |
| 4 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 3.00E-05 |
| 5 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 3.00E-05 |
| 6 | GO:0019172: glyoxalase III activity | 7.58E-05 |
| 7 | GO:0005353: fructose transmembrane transporter activity | 7.58E-05 |
| 8 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 1.32E-04 |
| 9 | GO:0000156: phosphorelay response regulator activity | 1.88E-04 |
| 10 | GO:0016168: chlorophyll binding | 2.55E-04 |
| 11 | GO:0019139: cytokinin dehydrogenase activity | 3.42E-04 |
| 12 | GO:0004462: lactoylglutathione lyase activity | 4.20E-04 |
| 13 | GO:0000989: transcription factor activity, transcription factor binding | 8.63E-04 |
| 14 | GO:0008047: enzyme activator activity | 1.06E-03 |
| 15 | GO:0008131: primary amine oxidase activity | 1.50E-03 |
| 16 | GO:0051119: sugar transmembrane transporter activity | 1.61E-03 |
| 17 | GO:0031409: pigment binding | 1.73E-03 |
| 18 | GO:0030570: pectate lyase activity | 2.38E-03 |
| 19 | GO:0003727: single-stranded RNA binding | 2.52E-03 |
| 20 | GO:0047134: protein-disulfide reductase activity | 2.66E-03 |
| 21 | GO:0004791: thioredoxin-disulfide reductase activity | 3.09E-03 |
| 22 | GO:0048038: quinone binding | 3.40E-03 |
| 23 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.40E-03 |
| 24 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.71E-03 |
| 25 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 4.88E-03 |
| 26 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 5.78E-03 |
| 27 | GO:0051537: 2 iron, 2 sulfur cluster binding | 7.75E-03 |
| 28 | GO:0043621: protein self-association | 7.75E-03 |
| 29 | GO:0045330: aspartyl esterase activity | 9.70E-03 |
| 30 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.04E-02 |
| 31 | GO:0030599: pectinesterase activity | 1.11E-02 |
| 32 | GO:0015035: protein disulfide oxidoreductase activity | 1.18E-02 |
| 33 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.38E-02 |
| 34 | GO:0016829: lyase activity | 1.43E-02 |
| 35 | GO:0044212: transcription regulatory region DNA binding | 1.61E-02 |
| 36 | GO:0046910: pectinesterase inhibitor activity | 1.62E-02 |
| 37 | GO:0043565: sequence-specific DNA binding | 2.10E-02 |
| 38 | GO:0016788: hydrolase activity, acting on ester bonds | 2.36E-02 |
| 39 | GO:0050660: flavin adenine dinucleotide binding | 2.58E-02 |
| 40 | GO:0052689: carboxylic ester hydrolase activity | 2.91E-02 |
| 41 | GO:0004871: signal transducer activity | 3.18E-02 |
| 42 | GO:0005515: protein binding | 3.98E-02 |
| 43 | GO:0008289: lipid binding | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 2.13E-11 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.46E-10 |
| 4 | GO:0009507: chloroplast | 2.25E-08 |
| 5 | GO:0009538: photosystem I reaction center | 8.44E-06 |
| 6 | GO:0009579: thylakoid | 1.42E-05 |
| 7 | GO:0009941: chloroplast envelope | 2.67E-05 |
| 8 | GO:0010287: plastoglobule | 7.83E-05 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 8.48E-05 |
| 10 | GO:0005623: cell | 8.82E-05 |
| 11 | GO:0009522: photosystem I | 1.41E-04 |
| 12 | GO:0009517: PSII associated light-harvesting complex II | 2.67E-04 |
| 13 | GO:0030095: chloroplast photosystem II | 1.50E-03 |
| 14 | GO:0030076: light-harvesting complex | 1.61E-03 |
| 15 | GO:0009570: chloroplast stroma | 1.72E-03 |
| 16 | GO:0042651: thylakoid membrane | 1.98E-03 |
| 17 | GO:0005622: intracellular | 2.26E-03 |
| 18 | GO:0031969: chloroplast membrane | 3.04E-03 |
| 19 | GO:0009523: photosystem II | 3.24E-03 |
| 20 | GO:0071944: cell periphery | 3.71E-03 |
| 21 | GO:0031977: thylakoid lumen | 6.94E-03 |
| 22 | GO:0009706: chloroplast inner membrane | 1.16E-02 |
| 23 | GO:0005618: cell wall | 1.52E-02 |
| 24 | GO:0009705: plant-type vacuole membrane | 1.70E-02 |
| 25 | GO:0005615: extracellular space | 1.85E-02 |
| 26 | GO:0046658: anchored component of plasma membrane | 2.08E-02 |
| 27 | GO:0016020: membrane | 2.39E-02 |
| 28 | GO:0005576: extracellular region | 3.09E-02 |