Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G54830

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048867: stem cell fate determination0.00E+00
2GO:0031338: regulation of vesicle fusion1.30E-05
3GO:0061014: positive regulation of mRNA catabolic process1.30E-05
4GO:0019673: GDP-mannose metabolic process1.30E-05
5GO:0010289: homogalacturonan biosynthetic process3.42E-05
6GO:0032012: regulation of ARF protein signal transduction6.16E-05
7GO:0016255: attachment of GPI anchor to protein6.16E-05
8GO:0042351: 'de novo' GDP-L-fucose biosynthetic process6.16E-05
9GO:0090630: activation of GTPase activity6.16E-05
10GO:0080119: ER body organization9.36E-05
11GO:0051601: exocyst localization9.36E-05
12GO:0019048: modulation by virus of host morphology or physiology9.36E-05
13GO:0009846: pollen germination2.29E-04
14GO:0033962: cytoplasmic mRNA processing body assembly2.53E-04
15GO:0070370: cellular heat acclimation2.99E-04
16GO:0006402: mRNA catabolic process3.46E-04
17GO:0007155: cell adhesion3.46E-04
18GO:0006875: cellular metal ion homeostasis3.46E-04
19GO:0009932: cell tip growth3.94E-04
20GO:0060321: acceptance of pollen3.94E-04
21GO:0010152: pollen maturation6.58E-04
22GO:0006890: retrograde vesicle-mediated transport, Golgi to ER6.58E-04
23GO:0016024: CDP-diacylglycerol biosynthetic process6.58E-04
24GO:0009826: unidimensional cell growth8.75E-04
25GO:0010073: meristem maintenance1.01E-03
26GO:0006874: cellular calcium ion homeostasis1.01E-03
27GO:0045492: xylan biosynthetic process1.27E-03
28GO:0051028: mRNA transport1.34E-03
29GO:0008284: positive regulation of cell proliferation1.34E-03
30GO:0006886: intracellular protein transport1.36E-03
31GO:0000271: polysaccharide biosynthetic process1.41E-03
32GO:0010501: RNA secondary structure unwinding1.41E-03
33GO:0045489: pectin biosynthetic process1.48E-03
34GO:0016032: viral process1.78E-03
35GO:0010286: heat acclimation2.02E-03
36GO:0071805: potassium ion transmembrane transport2.02E-03
37GO:0009627: systemic acquired resistance2.35E-03
38GO:0048767: root hair elongation2.69E-03
39GO:0009834: plant-type secondary cell wall biogenesis2.78E-03
40GO:0009631: cold acclimation2.87E-03
41GO:0016051: carbohydrate biosynthetic process3.05E-03
42GO:0006887: exocytosis3.43E-03
43GO:0006897: endocytosis3.43E-03
44GO:0009744: response to sucrose3.63E-03
45GO:0006813: potassium ion transport4.44E-03
46GO:0006417: regulation of translation4.76E-03
47GO:0051726: regulation of cell cycle5.89E-03
48GO:0009058: biosynthetic process6.85E-03
49GO:0016036: cellular response to phosphate starvation7.87E-03
50GO:0006413: translational initiation7.87E-03
51GO:0040008: regulation of growth8.00E-03
52GO:0006470: protein dephosphorylation9.07E-03
53GO:0007275: multicellular organism development1.12E-02
54GO:0009860: pollen tube growth1.18E-02
55GO:0007049: cell cycle1.21E-02
56GO:0016192: vesicle-mediated transport1.35E-02
57GO:0006397: mRNA processing1.77E-02
58GO:0006357: regulation of transcription from RNA polymerase II promoter2.10E-02
59GO:0051301: cell division2.76E-02
60GO:0045893: positive regulation of transcription, DNA-templated2.86E-02
61GO:0071555: cell wall organization4.29E-02
RankGO TermAdjusted P value
1GO:0003729: mRNA binding9.64E-06
2GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity1.30E-05
3GO:0008446: GDP-mannose 4,6-dehydratase activity1.30E-05
4GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity3.42E-05
5GO:0003923: GPI-anchor transamidase activity3.42E-05
6GO:0019829: cation-transporting ATPase activity6.16E-05
7GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity1.30E-04
8GO:0005086: ARF guanyl-nucleotide exchange factor activity1.30E-04
9GO:0017137: Rab GTPase binding1.68E-04
10GO:0001104: RNA polymerase II transcription cofactor activity3.94E-04
11GO:0015020: glucuronosyltransferase activity5.49E-04
12GO:0005388: calcium-transporting ATPase activity7.14E-04
13GO:0015079: potassium ion transmembrane transporter activity1.01E-03
14GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.14E-03
15GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity1.48E-03
16GO:0016853: isomerase activity1.56E-03
17GO:0004004: ATP-dependent RNA helicase activity2.43E-03
18GO:0005096: GTPase activator activity2.69E-03
19GO:0000149: SNARE binding3.24E-03
20GO:0016757: transferase activity, transferring glycosyl groups3.30E-03
21GO:0008026: ATP-dependent helicase activity5.89E-03
22GO:0016758: transferase activity, transferring hexosyl groups6.48E-03
23GO:0003743: translation initiation factor activity9.21E-03
24GO:0003723: RNA binding9.47E-03
25GO:0005515: protein binding1.20E-02
26GO:0004722: protein serine/threonine phosphatase activity1.58E-02
27GO:0005525: GTP binding3.70E-02
RankGO TermAdjusted P value
1GO:0010494: cytoplasmic stress granule3.70E-06
2GO:0042765: GPI-anchor transamidase complex6.16E-05
3GO:0000932: P-body7.88E-05
4GO:0005844: polysome1.30E-04
5GO:0070847: core mediator complex2.10E-04
6GO:0005783: endoplasmic reticulum2.82E-04
7GO:0005794: Golgi apparatus3.19E-04
8GO:0030131: clathrin adaptor complex3.46E-04
9GO:0005802: trans-Golgi network5.37E-04
10GO:0030659: cytoplasmic vesicle membrane7.72E-04
11GO:0000139: Golgi membrane1.04E-03
12GO:0000145: exocyst1.78E-03
13GO:0016592: mediator complex1.78E-03
14GO:0005856: cytoskeleton3.93E-03
15GO:0005768: endosome5.11E-03
16GO:0012505: endomembrane system5.54E-03
17GO:0009524: phragmoplast6.85E-03
18GO:0005789: endoplasmic reticulum membrane8.67E-03
19GO:0005887: integral component of plasma membrane2.14E-02
20GO:0005829: cytosol3.90E-02
21GO:0005622: intracellular3.90E-02
Gene type



Gene DE type